Acanthopagrus latus (yellowfin seabream): 119013392
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Entry
119013392 CDS
T08233
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119013392 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119013392 (dhx58)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119013392 (dhx58)
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
119013392 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Hydantoinase_B
PhoH
Motif
Other DBs
NCBI-GeneID:
119013392
NCBI-ProteinID:
XP_036943765
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All DBs
Position
23:complement(17873422..17879024)
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AA seq
692 aa
AA seq
DB search
MIYCLKGGKFRMADFGLYEYQEEVVEQALQGENIIIWLPTGGGKTRAAVYVAKRHLETTR
NAKVVVLVNKVHLVDQHYTKEFKPHLRHDYALVPVSGESEEKDFFGKVVQDNDVIICTAQ
ILYNALTNTEETKHVELSDITLLIIDECHHTHKESVYNKVMGCYVEKKLSKEGPLPQILG
LTASPGTGGAKTLEKAVEHVLQICANLDSAIVSTKHYAPELKRNVPRPIKTFDVVVPRPH
DPLGDHLKWMMELVHEFMVLPSDYTLRETGTQEYEADVVILEQQGVRQGNRQLAECARHL
RQYNDALLINDTLRMMDAYRSLNEFYNMKSATVIDGTDLFLVGLFQENQVELRKLAGDSR
YENPKMSKLQSVLLEQFVPSVESRGILFSKTRRSTHCLHDWVSTNKVLQEAGIKAAILTG
AGNGITYMTQHEQADTIRRFRQGSLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQ
ASGRARAKDSKYSVVAQKGGREERREHINEYLEELTGQAIAKVQDMSPQEFRIKIAELQK
QAVICKKLAERRLAEKRSRHSAASVQLLCRNCFKPVASASDIRLVDNAHYVNVNADFKRH
YKVGGQVCLDRTFEDWEPGCTISCNNGSCNKDWGFEMKYKKRALLPNIAIKHFALQTPDG
RTTAKKWKDVTFTVEHFSFVEYCDENFPDLLD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgatctattgtctcaaaggaggaaagttcaggatggcagattttggactgtatgaatac
caggaggaagtggtcgaacaggctcttcaaggagagaacataattatttggctgccgact
ggaggtggaaagacccgtgctgcggtgtatgtggccaaaagacacctggagaccacacgt
aacgccaaggtggtggtcctggttaacaaggttcaccttgtggaccagcactacaccaaa
gagttcaaaccacacctgcgccatgactacgccctggtgccggtcagtggagagagtgag
gagaaggactttttcgggaaagttgtgcaggacaatgacgtaatcatctgcacagcacag
atcttgtacaatgctctgactaacacggaggaaaccaaacacgttgagctctcagatatt
actcttctgataatcgacgagtgtcaccacacccacaaggagtcagtctacaacaaggtg
atgggatgctacgtggagaaaaagctgagcaaagagggaccgttgccacagatcctgggt
ctcactgcgtcaccaggaacaggaggtgcaaagaccctggaaaaggctgtggagcacgta
ctgcagatttgtgccaacttggactcagccatagtctcaactaaacactatgcccccgag
ctgaagaggaacgtccccagacccatcaagacatttgatgttgtggtgccaaggcctcat
gatccattgggggatcatctgaagtggatgatggagctggtccatgagttcatggtgcta
ccttcagactacacactgagagagacaggcacgcaggagtatgaggcagatgtggtgatt
ctagagcagcaaggagtaagacagggcaacagacagctagcagaatgtgcacgccacctc
agacagtacaacgacgccctgctcatcaatgacaccctgcgaatgatggacgcttatcgc
tccctaaacgagttctacaacatgaagtctgcaacagtcattgatggaacagacctgttc
ctggtgggacttttccaagagaatcaggtggagctcaggaaactggcaggggactctcgc
tatgaaaacccaaagatgtccaaacttcagagcgttctgctagaacagtttgttccaagt
gttgaatcaagggggatcctcttcagtaaaacccgcagaagcacccactgcctacatgac
tgggtcagcaccaacaaagtcttacaggaagctggcatcaaggcagctatcctcactggg
gcgggcaatggcatcacttacatgacgcagcacgagcaggcggacacgatccgcagattc
cgccagggttctctcaacctgctgatctccaccagtgtggctgaggaaggccttgacatc
ccagaatgcaacctggtcgtacgttatggactgctgacgaatgagattgcccagcagcag
gccagcggacgtgcccgggccaaagacagcaagtactcagtcgtcgcccagaaagggggc
cgggaagagcgccgggagcacatcaatgaatatctggaagagctgacaggacaggccatt
gcaaaggtccaagacatgagccctcaggagttccgcataaagatagctgagctacaaaag
caggcagtcatctgcaaaaaacttgcagagaggcgcctagcagagaagaggagtcgccac
agtgctgccagtgtccagctcttgtgtcgaaactgtttcaagcctgtggcctctgccagt
gacattagacttgttgacaatgcgcactatgtcaacgtcaatgctgacttcaagagacac
tacaaagtcggtgggcaggtgtgtctggacaggacttttgaggactgggagcctgggtgt
acaatcagttgcaataacggcagctgcaacaaggactggggattcgagatgaagtacaag
aagcgtgccctgctgccaaatatagccattaagcactttgccctgcagacacctgatggc
aggacgactgcaaagaaatggaaggatgtcaccttcactgttgagcacttcagcttcgta
gaatactgcgatgaaaacttccctgaccttcttgattga
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