Acanthopagrus latus (yellowfin seabream): 119013397
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Entry
119013397 CDS
T08233
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04137
Mitophagy - animal
alat04144
Endocytosis
alat04145
Phagosome
alat04148
Efferocytosis
alat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119013397 (rab5c)
04145 Phagosome
119013397 (rab5c)
04137 Mitophagy - animal
119013397 (rab5c)
04148 Efferocytosis
119013397 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119013397 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119013397 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119013397 (rab5c)
04031 GTP-binding proteins [BR:
alat04031
]
119013397 (rab5c)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
119013397 (rab5c)
Endosome - Lysosome transport
119013397 (rab5c)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119013397 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
119013397 (rab5c)
Exosomal proteins of colorectal cancer cells
119013397 (rab5c)
Exosomal proteins of bladder cancer cells
119013397 (rab5c)
GTP-binding proteins [BR:
alat04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
119013397 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
119013397
NCBI-ProteinID:
XP_036943778
LinkDB
All DBs
Position
23:complement(17889235..17900006)
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacggcacagcagcgagcaacaagatctgc
cagttcaagctggtgctgttgggggaatcggcggtggggaagtccagcttggtgctgcgc
tttgtcaaaggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacagtatgtttggatgatacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttagcacccatgtactacaggggagcccaggctgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgccaagaactgggtaaaggagctgcag
cgacaggccagtcccaatattgttattgcactggcaggaaacaaagcggatctggccaac
aagagagctgtagatttccaggaagcacaagcatatgcagatgacaacagtttgctgttc
atggagacttcagccaagacggctatgaatgtcaatgagatttttatggctatagccaag
aagcttcccaagaatgagcctcagggtggagcaggcgctggtggacgggccagaggtgga
gtggacctgcaggaagctgcaccacagggcagaagtggccagtgctgtgggggcgggaac
taa
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