Acanthopagrus latus (yellowfin seabream): 119013411
Help
Entry
119013411 CDS
T08233
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119013411 (rfx1a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Other basic domains
RF-X
119013411 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
119013411
NCBI-ProteinID:
XP_036943799
LinkDB
All DBs
Position
23:11242798..11255230
Genome browser
AA seq
1009 aa
AA seq
DB search
MATSGYVGEIQPTAQPQGAGVTVTQGQPDASSTPPTAPQFLAEIQTTVVTPTVVTPTGQT
TPTDQATSITAQKPVAGNQTQSAAQAQPAQTQYVTAEIQGSPSQSGNAQSTPQYIVVTVT
EGSLHSSDSVSDSSPPPAVVQTGVPTQVVQQVQAAQQQRSVVQATSQIAKTEPGTQLSVT
SLQPVHISPEVEPPSAGFQLCPGTEVTALVRDNSLEEFQLLHEIGQSECPVSGDSIQEWY
DIPLFLPLDLLQYYQSLNLLSVHVEREIQVHPPVTSSFLDQPPLQATTATVQVQQQLTPV
PVQHVYTNQVQYVEGTDTNYTTSTIRSSTFPYTDTPLYTQTTATQYYEGQPTSGSQASTP
GTPLTVSVTAGTAGSVSMFVAQPTSAAGGGATVVTTGGTTNGAGEGAGTNGGTASSYVIQ
GGYMLGSSSGGAAGNSQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGV
SLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIK
AGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAAGAGQQQQQQQGSGQVDI
STQVQQYQQFLDASRTLPEFPDIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNL
QFTLVETLWKTFWRFSQSQAGDATLAVHDESEKRLPKCCLVLLCKYDPVLRWSRDCDNSL
YQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQT
LRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQN
FKLTLQQQNSLEQWAAWLDGVVSQVLKPYQHSPAFPKAAKLFLLKWSFYSSMVIRDLTLR
SAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLSQLDPDKEEEE
EEEEESDDEGQELSLPSDGPVLGEESLEPPAKLARTDQRVLFTTGSAEN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctatgtaggcgagatccagccgacagcccaaccccagggggctggt
gtgactgtcacacaggggcaacctgatgccagctccacacctccaactgctcctcagttt
ctggctgagatccagactactgtggtcactcccactgttgtcacacccacaggccaaact
actcccaccgatcaagccacctccatcacagcgcagaagcccgtagctggtaatcagact
cagtctgcagcacaggcccagccagcccagacacagtatgtgactgcagagatccagggc
tccccctcgcagtctggaaatgctcaaagcactcctcagtatattgttgtcacagtcaca
gagggctcccttcactcaagtgacagtgtgtcagactccagcccccctccagctgtggtg
cagacaggagttcccacgcaggttgttcagcaggtacaagcggctcaacagcagaggtca
gttgtgcaggccacctctcagatagccaagactgaacccggcacccagctcagtgtcacc
agtctacagcctgttcatatcagcccggaggttgaacctccctctgctggcttccagctc
tgtcctggcactgaggtgacagcgttagtcagagataacagtctagaagaattccagcta
cttcatgagataggacagtcagagtgcccggtatcaggagacagcatacaggaatggtac
gatattcccctcttcctccccttggacctccttcaatactaccaatcactgaacttgctc
tctgtgcatgtggagagagagatacaagttcaccctccagtcacaagctcattccttgat
cagccaccactgcaggctacaactgccactgtccaagtccagcagcagctcaccccagtg
ccagtgcaacatgtgtacaccaatcaagtgcagtatgtggaaggaacagacaccaactac
accaccagtaccattcgttccagcaccttcccttacactgatacacctctgtacacccag
accacagccacccagtactatgaaggtcagccaacctcaggctcacaggcctccacccct
ggcacacctctaaccgtctcagtgactgctggcacagctgggtctgtgtccatgtttgtg
gcccagcccaccagtgcagcagggggaggggccactgtggtgaccacaggtggtaccacc
aatggggcaggggaaggggcaggcaccaacggtggcacagcaagcagctatgtgatccag
gggggttacatgctgggcagcagcagcggaggggcagctggcaacagtcagaactactct
cacactgcccgcgcctctccagccactgtgagtattacagagggcgaggagagtagcgtg
ccgtcggcagacaaaaaggtacagtggttgctggacaactatgagacagctgaaggagtg
agtctgccacgttcgaccctctactgccactatctgttgcactgccaggagcagaaacta
gagcctgttaatgctgcatctttcgggaaacttattcgatctgtgttcatggggctacgc
acacgacgcctgggcacacggggtaattctaaataccactattacgggctgaggatcaag
gcaggctcttctcttctccgcctaatggaggaccagcagcatctggccatgaggcagcag
cccttctcacagaaacagaggttgaagccagtgcataaagtagaggggatgactaatggc
acagcagccggagcaggccagcagcagcaacagcagcagggctcggggcaggtggacatc
agcacccaggtgcagcagtaccagcagttccttgatgcatccagaactctcccagagttc
ccagacattgacctccagggaaagtctctgccagaaggcattgagctggagcacattaag
agctttcagctgctgtacagagaacactgtgaggccatactagatgtgatggtcaacctg
cagtttaccctggtggaaactctgtggaagaccttctggagattcagccagagtcaggct
ggagatgccacgttggctgttcacgacgagtcagagaagcgtctccctaagtgctgtctg
gtgttgctgtgcaagtatgacccagtgctgcgctggagccgtgactgtgacaacagcttg
taccagggcctggtggagatcctcatccctgacgtcctcaggcccatccccagtgcctta
actcaagccatccgtaactttgccaagagcctggagagctggctgaccaatgccatgatg
aacatccctgaggaaatggtccgcatcaaggtaacgtcagccaatgcctttgcccagaca
ctgcgtcgctacactagtctgaaccacctggcccaggcagcccgtgctgtcctccagaac
acagcacagatcaaccagatgctgtccgacctcaaccgtgttgactttgctaatgtacag
gagcaggcctcatgggtgtgccggtgtgaagaccgcgtcgtccagcggctggagcagaac
ttcaagctgaccctccagcagcagaactccctggagcagtgggctgcatggctggatggt
gtcgtctcccaggtcctaaagccctaccagcacagccctgctttccccaaggctgccaag
ctcttcctgctcaagtggtccttttacagttccatggtgatccgggacctgaccctgagg
agtgcagccagttttggttcctttcacctcatccgcctgctgtatgatgagtacatgtac
tacctgatagagcacagagtggcccaggctaaaggagagaccccaattgctgtcatggga
gagtttgccagtctaggtcggggtctaagccagttggatcctgacaaagaagaggaagag
gaagaggaggaggagagcgacgatgaaggacaggagctgtcccttccctcagatggtcct
gtgctgggagaggagtctctggagccacctgctaagctggccagaacagatcagagagtc
ctcttcaccaccggatcagctgaaaactag
DBGET
integrated database retrieval system
