Acanthopagrus latus (yellowfin seabream): 119013585
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Entry
119013585 CDS
T08233
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
Motif
Other DBs
NCBI-GeneID:
119013585
NCBI-ProteinID:
XP_036944151
LinkDB
All DBs
Position
23:complement(15472954..15554613)
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AA seq
2470 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEDERDEDQEEEENGELE
GEEDEDEEEMVEEVRRGGLSRGGRGEGHRQSGKLAGRPTGDRQIRQGNPGHTANPYSSNP
GPTHQQPANHIQQQQQQQQQQQRRLKERSSSSAPSEDTHIAMMVFRIGIPDIKQTKCLRF
NPDATVWKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVP
YLEFRYKTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMIKFIDKGLDPNFQDS
DTGETPLSLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTSIHKAVRGHRHTALLVLLSL
GASPDYKDRRGLTPLYHTVLTGGETSCCETLLYHRAKLGIRDENGWDETHQACQNGNSQH
LEHLLFYGADSSSTNASGNTALHICALYNKESCARILLYRGANKDTKNNSGQTPFQVAVM
SGHFELGEIIKNHRDTDVVPFVESPKYAPQRRESNRTLTIPHPHPFLRANSDSSMNLPDW
MAVPNAPGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPA
TTAGQTAGQRRRLYSAVPGRVFVATRSHSAQGEREITFNKGDRVKVLSVGEGGYWEGTVR
GRTGWFPSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLL
QKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVN
GQNVVKVGHRQVVNMIRQGGNSLMVKVVMVTRNPDMDEGTRKKIPQQSKRLSTPAIALRS
KSMTSELEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEA
PGTRGQGPKRDRGRSFYGNEPNYGDQSGMGMMSSGLGLGYDRGQYTSGHGPPHGMLRQKS
IGVPEEEKQFLHPPAMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRTKTSQQPS
VSVSQSTSTSAHYQPYSQSVHFTHGGRERAGGSSTGPSGGAVDHTTPYAHAASHTAQSRT
ASRKVAYTGEPVGAGIGAGGGAKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADR
SAAGAGAGGPKGGARRGKGPLVKQSKVEDLRAGQGTLGDKGSVEKSSIPIPTIIVKAPST
SSSGRSSQGSSVEADAPASGETDDAKTPHGPPPSTPAPQPPAPPSIPAPPPPTLPSMRAQ
DNLDYTSQFGAAIVGAARRDRERFIEARRKSASLFMSAEEDVSLGGVSDGIGGVSRTQVS
QQQLSTQAESSSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSHALDYQPKSVP
TDLYTAAGRQQAPSTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGAEHHFTR
QMSSVVFPTSIASSQPVSSAGQSSSSSYLVTSSSLAATTATVGRPPSPRILRGVGSVWSE
EGSGGEREREGGGAREGLRVRFSEDKTVHTHHYQSQPYQPTYKERERERSRERERELSRE
RERDKEREGYMRRAEQAAAAAENSALQASQSQQPRRPSFLRMESQADAYVLSLTPPSPPP
TGTQQTANTTGNTSSGMMVLPPPAPSVDADDEFVYADPLPPPLEFANSFDRGIGRISGYS
QHGMVANSLASRQQQVPPPPPPPPPPPPPPPPPPQKEPFVSGFPAHTPLPSPQAGDSTAS
SLTSYDSEVANLTQSAPSPSQTSPNPQHPPSPSTLQPTSGPPPPPSVSPPPPPGSYHRPF
SMSHPHHLYNSSHTPGRSSPTPPPHTVAPPPAYRGPPAPSSTAATSALQRSTASHATTAS
CAATTTTAATTTSTSTQLYHERTHTTHTSSTSIMGSRRTGEHHRPPPATKKGESQETVVD
SGIEELDSRSSSDHHLDSILALSGARDRLDRGERGGGAGGRMGVGGGTGESEKGGDFLES
YMSYLDGQTFEMQNATAAASTYPKANRFREGGRSSDVHRQTSTAPASYHSHRRREEPEEE
EVEEGVTEDESGQDGYGMRDMQNLGRPISPYFDRPRTPEMKPHWSEGQMSGDGQSGTLLE
GKKVYPPASSMKPSIINELNSKLQQRGKESWSSQRTLSRHRSRNRFSEDSASALSPPSAR
SQSPSPISLSQPSLSPSPTPASQYPNWGRSPSPQPPAASQPPRSHSPLSPTSYAPYPTSP
KHRPVYRTKALEFQFIPSRESRKAESHMLQRRRAPSPLISPSERPKLGPPRPSSLPLLPT
TPLYSAIYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSGAPPPQNSNLVVSRSLSPTHFL
SGTSSPPLHPLPPPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERF
LDNEIDGTHLPSLTKDDYLDLGVTRVGHRMNIERALRTIMDRLSSSPFPISVLSPRDGQT
ERRRDDGSRS
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgttcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacatctctatccaggggcagaggacgaggaggaggaggaggaagaggaggaggag
gaaatggaagaggacgagcgtgacgaggaccaggaggaggaggagaatggggagctggag
ggcgaagaggatgaggatgaggaggagatggtggaggaggtcaggcgaggaggcctgtca
cgtgggggcaggggtgagggacacaggcagtcaggtaaactggctggacgacccaccggg
gacagacagatccggcaagggaaccccggacacaccgcgaacccctattcgtccaacccc
ggaccaacacaccaacagccagccaatcacatacagcagcagcagcagcagcagcagcag
cagcagaggaggctgaaggagcgcagctccagctcagcgccatctgaggacacccacatt
gccatgatggtgtttcgcatcggcatcccagacataaagcaaacgaaatgtttgcgattc
aacccggacgccacagtgtggaaggccaagcagcaggtgctgtgctccctgaccgaatct
cttcgggacgtcctgaactacggtctgttccagcccgccacggatggacatgacgccaag
ttcctggaggaggagaggctcctcagagagtacccacagtcctttgagaaaggggtgcca
tatttagagtttcgatacaagaccagggtgtacaaacagaccaatctggatgagaagcaa
ctggccaaactgcacacgaaggccagcctgaagaaattcatggattatatccaaaccagc
gctgtggacaagatgattaagttcatagacaaaggcctcgatccaaacttccaggactct
gacaccggcgagactcctctgtccctggcggtgcagtgtgagccgggtggaggtgaggcc
atccgggtcctggtggagggcggggctcacatcgacttccgcgccaaagacgggctcaca
tcgatacacaaggctgttcgaggccaccgccatacagccctgctggtcctgttgtctctg
ggtgcatctccggactataaggaccggcgagggctgacgccactctatcacactgtgctg
acagggggagagacctcctgctgtgaaacactcctttaccaccgcgccaaactgggcatc
agggatgagaacggctgggacgagacacatcaggcctgtcagaatgggaactcgcagcat
ctggagcacctcctcttctacggggcggattcttcctccacgaatgcctctggaaacact
gccttgcacatctgtgctttatacaacaaggaaagctgtgcacgaattctgctctaccgg
ggagcaaataaagacacaaagaacaacagtgggcagaccccctttcaggttgctgtcatg
tctggtcatttcgagctgggagaaatcatcaaaaaccaccgggatacagatgtggttccc
tttgtggagtcgccaaagtacgccccccagaggcgggagagcaaccgaacgctgacaatc
ccccaccctcaccctttcctccgggccaacagtgacagcagcatgaacctgccagactgg
atggcagtgcccaacgccccggggactaacattgtctcagtgcagggttataagcatacg
ggaaccttgcggagctccagcagtcccagaggggcgaggacgcgctccccgtccagaggg
aggatcggtgacaaggaggacaggagcagacagagtcggaggcaggggcctgcccctgcc
accacggctggacaaacggcaggccagcggagacgcctgtacagcgccgtcccaggacga
gtctttgtagccacccggtcacactctgcccagggagaacgagaaatcaccttcaataag
ggagacagggtcaaagtgttgagtgttggcgagggcggatactgggaggggacggtcagg
ggtcgcacgggctggttcccctccgactgtgtggaggaagtgatgctacggagccaagac
aaccgatcagagagccgcggagaacgagccaaaaggctgtttcgccattacactgtggga
tcctatgacagctttgacgctcccagtgactatataatcaaggagaagacggtgcttctg
cagaaaaaggacagcgagggctttggctttgtgctgagaggagccaaagctcagactccc
atcgaggagttcactcccaccccggccttccctgccctgcagtacctggagtcagtggac
gagggaggcgtcgcctggagagccggcctcaggatgggggatttcttaatcgaagtcaat
ggtcagaacgtggtgaaggtcggtcaccggcaggtcgtcaacatgatccggcaaggtggc
aacagcctcatggttaaggttgtaatggtaactcgcaaccccgacatggacgaaggtacg
aggaagaaaatcccacagcagagtaagaggctgagcaccccggccatcgccctacgatcc
aaatccatgacttcagaactggaggagatggtggagagagctgctaccccttggaaaaaa
aaatcagaattcgaatcctcacaagttacagagaagaagaggacagtctatcagatggct
ttgaataaactagatgaaattcttgcagcagctcagcagacaatcagcaccaatgaggcg
ccggggacacggggacaggggccaaaaagagacagggggcgaagcttctatggcaatgag
ccaaactacggggatcagtccgggatggggatgatgtcgtcggggctgggccttggctat
gaccgtggccagtacacctcaggtcacggcccaccgcacggtatgctgcggcagaaatcc
atcggggtgcctgaggaggagaagcagttcctgcatcctccggccatgaagtttgcccgt
agtctgtccgtgcccggcccagacgacatccctcctcctcccactacagctccaccagac
cctccgttctcctctgctccgccactaggttggagaacgaagacatcccagcagccctct
gtctccgtgtcccagtcaacatcgacctctgcgcactaccagccctactcccagtcagtg
cacttcacccatgggggcagggagagggctggtggttctagcactggccctagtggtgga
gcagtggaccacacaaccccatatgcacatgctgcttcccatactgctcaaagcaggact
gcttcgcggaaggttgcctacactggggagcctgttggagctggcataggggctggtgga
ggggctaaggcagcaggtcttaggagaggctatagcaccgctgtccccccatccagcatt
gccactgtgatgccccagcaacaacagaccacccagagtcaaccccagcgagcagaccgc
agtgcagctggggctggagcaggcggtcctaaaggaggggcccggagaggtaagggccct
ctggtaaagcaatccaaggtggaagacctgcgtgcaggccagggaacactaggggacaaa
ggctcggtggagaaaagctccatacccatccccaccattatcgttaaggccccttcaacc
agcagcagtggacgcagcagccagggcagcagtgtggaggcagatgctcctgcatcaggg
gagacagatgatgccaaaacaccccatggtcctcctccttccacccctgctccacagccc
cctgccccaccttccatcccagcaccaccgcctccaactttgccttccatgagagcccag
gataacctggactataccagccagtttggggctgcaattgttggcgcagctcgtcgagac
agggaacggtttattgaagcccgcagaaagagtgcctccttattcatgtctgctgaggag
gatgtgagtcttggaggagtgagtgatggaataggaggcgtatcgaggactcaggtgtca
cagcaacagcttagcacacaggctgaaagttcatcaacacgactgcgtccatccaagtct
attgacgagggcatgttctctggagatacttttatccatcacacccgcagtatgcctcca
gcctttggcttacctgagtactcctcacatgccctggactatcagcctaagtctgtgcct
actgacttgtacacagcggcgggcaggcagcaagcaccctccaccaccaccttcattcac
cctctcacaggaaaggctcttgaccccacatcgccactagggctagccctggctgccaga
gagcgtgctctgagggatgacagcaggttacgaaggggagcagagcaccatttcacccgc
cagatgtcgagtgtggtgttccctacgtctattgccagctctcagccagtgtcttctgct
ggccagtcctccagctcctcctatctggtcacctcgtcttctctggctgccacgacggcc
acagtaggtcgtccaccctcacccagaatcctcagaggagtagggagtgtgtggagtgaa
gaaggtagtggaggtgagagggagagggaaggcggaggggctcgtgaggggctaagagtt
cgcttctctgaggacaaaacggtccacacccaccactaccagtctcagccctatcagcca
acctacaaggagagggagcgggaaaggtcaagggaacgggagagggagctgtctagagaa
agagaaagggacaaagagagagagggttacatgaggagggcagagcaggctgctgcagcc
gctgaaaactctgctttgcaagcatcccaatctcagcagcctcgtagaccctcttttctc
aggatggaaagtcaggctgatgcctatgtcttgtccctcacccctccctctcctccacct
actggtactcagcaaacagcaaacactactgggaacactagcagtggtatgatggttctt
cctccccctgccccctcagtagatgcggacgatgagtttgtctatgctgaccccctaccg
cctccattagagtttgcaaatagctttgacaggggaatagggagaatatcagggtactca
caacatgggatggtggccaacagcctggcctcccgccaacaacaggtcccaccccctcca
ccacctccacctcctccaccgccaccacctcctccacccccccaaaaagaaccatttgta
agcgggtttcctgctcatacacccctgccatcacctcaggctggggactccactgcctcc
agcctcacgtcatacgacagtgaagtggctaacctgactcagtctgctccttccccatcc
caaacatcgccaaacccccaacatcctccctcaccctctaccctgcagccaacctcggga
cctccgcctcccccatctgtctcaccaccgcctcctcctggatcttatcatagacccttt
tcaatgtcccaccctcaccacctttacaacagctctcacactcctgggcgctcttccccc
acacctccccctcacacagtcgctcctcccccagcctaccgtggcccgccagcgccctcc
tccactgctgccacctctgctctacaaaggagcactgcctcacatgccacgaccgctagc
tgtgccgctacaaccaccactgctgccaccacaacaagcacctccactcagctctaccat
gagcgaacacacaccacacatacatcctccacctccatcatgggcagtcgcaggacgggg
gagcaccaccggcctccccctgctacaaagaaaggagagtcacaggagacagtggttgac
tctgggattgaggagctggacagccgcagcagtagtgaccaccacctggacagcatcctg
gctctaagtggagccagggacaggctggaccgtggggagagaggaggtggggcaggtgga
cggatgggagtggggggtgggacaggggaatcggaaaagggaggagattttctggagtct
tacatgagctacttggatggacaaacttttgagatgcaaaatgccacagctgcagcctcc
acctaccccaaagccaacaggttcagagagggaggtcgctccagtgatgtgcacagacag
accagcactgcgcctgcttcctaccactcccacagacgaagggaagagccggaagaagag
gaggttgaggagggagtgacagaggatgaaagtggccaggatgggtatgggatgagggac
atgcagaatttgggtcgtcccatttcaccatactttgaccgtccacgcactcctgagatg
aagcctcactggagcgaggggcagatgagtggggatggccaatctgggacacttttagag
ggaaaaaaggtttacccacctgcatccagtatgaagcccagcatcataaacgagctgaac
agcaaactgcagcaaagaggcaaggaaagctggagcagccagagaacactgagcagacac
agaagcagaaacagattttcagaagactcagcctcagctctgagccccccttcagctcga
tcccaatcaccatctccaatctccttatcacaaccatcgttatccccgtcgcccacccct
gcgtcccagtaccccaattggggtcgatccccatctcctcagcctccagctgcctctcag
cctccacgttcccattccccactgtccccgacatcttacgccccttacccaacctccccc
aaacacagacctgtctaccggaccaaagccctagaattccagttcatccccagtcgtgag
tcccgtaaagcagaatcacacatgctccagcgtaggcgagcacctagccccctcatctcc
ccttcagagaggccgaagctgggtccaccgcggccatcatctcttccccttctccccacc
acgcccctttacagtgccatctacgacctccgaggttcaatcaccccgccatcaccgggg
aaccctcttggagacccatacttctcaccctctcctcccctgtttgccccctctggtgcc
cctccacctcaaaactccaacttagttgtgtccagatccctttctccaactcacttcctg
tctgggacatcttctccacccctgcaccctctccctccgcccacctgcctgagttaccct
catctaccccctccttcccctacgaagccttttgcctccaagccgctgccctactggacc
aagtatgacgttgcagactggctgggatacctgaacttgggtgagcacagagagcgtttc
ctggacaacgaaattgatggcacccaccttccctccctaacaaaggacgactatctggat
ttgggtgtgacacgtgtaggccaccgcatgaacatagagcgggccctgaggaccataatg
gacaggctgtccagcagcccatttcctatttctgtactctcacctcgggatggacagact
gagaggaggagggacgacgggagtcggagctga
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integrated database retrieval system
