Acanthopagrus latus (yellowfin seabream): 119013801
Help
Entry
119013801 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119013801
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119013801
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
U-box type E3
119013801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
U-box
zf-RING_5
zf-C3HC4_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
119013801
NCBI-ProteinID:
XP_036944538
LinkDB
All DBs
Position
23:complement(8179942..8200927)
Genome browser
AA seq
1819 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGPHITLKDLKRQIMGREKLRAGDCDLQITNAQTKEEYTDE
EGLIPKGSSVIVRRIPNSGVKSGSHSKTRNTERSEGQHHHAFGAYKAMEEQSSTRALPLF
SKMANLADADVSEEDKIKVVLNQSIYESMNYNKKFGAVLPSNYTCYRCGTTGHHIRNCPA
TGVRPEHDKNFEALPRLKKSTGIPRSFLLEVDDPSIKGAMLTNSGHYAIPAIHAKAYAIG
KKEKPPFIPQEQLEPEGEEDPVPTELLCLICHDLLSDAVVIPCCGNSYCDDCIRTALLDS
EDHMCSTCGKSDVSPDTLIPNKFLRQAVNTFKKEQGQSKRGKCGSSQSQNPTPTPSPVPT
PPPPTMQIQPQKPYQSTHSQQDPLLYCAQTADTPSSSQVCEAPPTASGPAPAPDTPSTFL
QPAQGHLEVSDREPEERTHDDSAAAAPSVLVSHEDPTAAASQLIPLVKHTAEEQPQTVNP
QQSSSGAAQRNPGPPTIWESASSSSGYPPTAWSELNNRQLPPSSSSSSSYPVAPPPLFPS
PLFHTFLATQPPHNRYPPGYPPATPVWTLPTPQGAPIPSLCSSASSSSIPTLIPQNWYMH
QRKKKERSPNRGSTYRRSSSRSKSSMSKSSHSYSRSSSKSRSRSRSRSQGRSRPHSPYSR
HRNLHPRSQSSHSYSYGYKRSPTPSSSSSPRVGYRSRSKSPSDHHKASHHSRHHSKKSTS
SRYSSRRRGEHPQKETGGEGRGHLYAQPANQTRGLELDRERYLQWKQAYKEWCEKYFNSY
VGHFHQLPPPPLLGLPPSPPPQWVEREGSRSHSRANSKSRNRLQGRRTDGRSPPSQSSSD
SRSPPSHSSSDSRSTRSQSSSESRSSLSHSSRDSRSPPSQSSSDGRSTPSEDGVPPRALT
KGSEEAVLQERNTDDKQLITKKSENFSTSKHEQWSVKKHEKERGEVSSSPESTDDCRKDK
KRDNSGPSAYKDGTPVRDKVTASEALESVQTLMKPGKHLDKQRKSREQRSLEMDKRTRSD
KYSDSKQDVERRHKERRSKGAGRVDTDRYRNPEGSRASDSRSDKNRKRKGEDGQRSSVKA
QSSKCLKTKITEVPETRKSESLNPMDGKKQNIEKKQEKKMLPLTEQDIWEGGIKVKPQKK
ISININLDLKRKEESTEKLDLSSFESIAVKTSEEIETTGNGEKLNRGAAEIEVNEKKESS
RNREGEPEDEIKPEEREAKPVLKKDTHRDDEREMKTKEHSEEEDFDLWHYAFSGAEEQKK
ESKKQWEEQDRTEASEGRELSNDERRSAREGAQTERRVWSDGGGREMEESIAGPQKEKQR
AEGGNLPKEELMEGAKWWMGKAEEEEGMTKPKSQRSRDESHPHRSNTELDDGSTYEDHEE
TKTVMKTLEEFTQDRAADREEDLTLKQVPRSKWEEEESEEEEQDQPEIKVQKEALAVFLL
PLPSSSSSVSVTAETPTDRKMEGEKEQQRHREIENGRDRGRGREGEKNSRSVAPSSGRDR
PDNTSLMERGGERRTEMERPKDRERGRESERPRDRQKESKRSKERTRDEGRGRDRETERG
HGSRNLPSSSHDRERRDRHRGDDQSGDKSSWCPGRKSSSGSISRAGEPPDQNAHRTCRDT
FPDWKCKDRSRCQNPRDTSGNYRHQDRPTGTRHSPPSLSHSWGKALPPESPGGSELRKPR
MSSPGRELTQSKAEKGEYKRNRVDKVVKEGKVEGDADKLCGGRELEEGERPSSNSVSTSA
SQESSDDDDSDRGKEQKKKHRKEKRQGALELLEEGVLKKHKHKKAKKSRDGGAEGSSGEV
DNKWKEEEECAKLCSLMLF
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcattataaattctcctccaaactcagctacgacacggtggtgtttgac
ggcccgcacatcacgctgaaggacctgaagaggcagatcatgggcagggagaagctgcga
gccggggactgcgacctgcagatcaccaacgcacaaaccaaggaagagtacacagatgaa
gaaggtctgatacccaaaggctcctctgtcatcgtcaggaggatccccaacagcggagtc
aagtccggctcacacagcaagacccgaaacactgagcgatcagagggccagcatcaccac
gcttttggagcctacaaagcaatggaggagcagagttctaccagagccttaccccttttt
tccaagatggccaacctggcagatgcggacgtgtcggaggaggataagattaaagttgtg
ttaaatcagtccatctacgaatccatgaattacaacaagaagtttggtgctgttcttcca
tcgaactacacctgttaccgctgtggaactacaggacaccacatcaggaactgccccgct
accggagtaagaccagaacatgataaaaacttcgaggcccttccgagattgaagaaaagc
acaggcatccctcgttccttcttgctggaggtggacgatccaagcataaagggagccatg
ctgaccaactctggacattacgccattcctgccatacacgctaaggcgtacgccattggc
aagaaggagaagcctccattcattcctcaggagcagctagaaccagaaggcgaggaggat
cctgtccccaccgaactcctctgtctcatctgtcacgacctgctgagtgatgctgtggtc
ataccctgctgtggaaacagctactgtgacgactgtattcgcactgctttgctggattca
gaggaccatatgtgctccacttgtggcaagtcagatgtctcccctgataccttgataccc
aataaatttctccggcaggctgtgaacactttcaagaaagagcaaggtcaatctaaaaga
ggaaagtgtggtagctcccaatcccaaaacccaaccccgacgccgagccctgtccccacc
ccgccgcctccaaccatgcagatccaaccacagaagccttaccagtcgacccacagccag
caggatcctctcctctactgcgcacagactgcagacacaccatcatcgtctcaggtgtgt
gaggcgcctcccacagcatcaggccccgcccctgctcctgacacgccaagcacattcctc
cagcctgcgcaaggccacctggaggtatctgacagggagcctgaagagaggacacatgat
gactcagcggctgctgcaccttctgtgctggtgtcacatgaagatcccactgctgctgca
tcacagctgataccactggttaaacacactgcggaggaacagccccagacagtgaatcca
cagcagtcctcctcaggtgcagcccagagaaaccctggaccaccaacaatttgggaaagt
gcctcctcctcttcaggttatccccccacagcctggagtgagctgaacaaccggcagctg
cctccctcatcctcctcttcctcctcatatccagtagctcctccgcctctctttccctca
ccccttttccacacgttcctcgccactcagccgcctcacaaccgttacccccctggatac
ccacctgccacgcccgtctggaccctcccgaccccccagggtgcccctatcccttccctc
tgctcctctgcctccagctcctccatccctaccctcatcccccaaaactggtacatgcat
cagagaaagaagaaggaaaggtcacctaacagaggatctacctacagacgctcctcgtct
cgctcaaagtcttcaatgtccaaatcttcccactcctactctcgctcgtcgagtaagtcc
agatcccgctcccgatccaggtcccagggcagatcaaggccccactcaccctactcccgc
cacagaaacctccacccccgctctcagtcctcccactcctacagctacggttacaagcgc
tcccctacgccgtcctcgtcgtcttcacctcgagtcggttaccgttcaaggtccaagtcc
ccctcagatcaccacaaagccagccatcacagtcggcatcacagcaagaagtccacttcg
agcaggtacagctccaggaggcgaggtgaacaccctcaaaaggaaacaggaggcgagggg
agaggtcacctgtacgctcagcctgcaaatcaaaccagaggtctggagctggacagagag
cgctacctgcagtggaagcaggcgtacaaagagtggtgtgagaaatatttcaacagctac
gtcggtcacttccaccagctgcctcctcctcccctcctcggtcttcctccctctcctcct
cctcagtgggtcgaaagagaaggaagcagaagtcactcgcgcgccaactcgaaatcacgc
aatcgactccaaggtagacggacggatggacgctcccctccatcccagtcatccagcgac
agccgctcccctccatctcactcttcaagtgacagccgctccacgcgatctcagtcgtcg
agcgaaagtcgctcctctctgtctcattcgtcccgcgacagccgctcccctccgtctcaa
tcgtcctctgacggacgctccaccccatcagaagacggagttccgccgagggcacttaca
aagggcagtgaagaagcggttttgcaggaaagaaatacagatgacaagcagctaattaca
aagaaatcagagaacttcagcacctcaaaacatgagcaatggagcgtgaagaaacatgag
aaggaaagaggagaggtgtcctcatcccccgagtcaacggatgactgcagaaaggacaag
aagagggacaactctggaccaagtgcctacaaggatggcaccccggtacgtgacaaagtc
accgccagtgaggccttagaatcagtccaaacactcatgaaaccaggtaaacatttggat
aaacaaagaaaaagcagagagcaaagaagtttggaaatggataaaagaacgagaagtgac
aaatactctgactcaaagcaggatgtggagagacgacacaaagaaaggcgcagcaaaggt
gcaggcagggtggatacagacaggtacagaaaccctgaaggcagcagagcctctgactca
cgatcagacaagaaccgaaaaagaaaaggagaggacggtcagagaagctctgtgaaggcc
caaagcagcaagtgtctgaaaacaaaaatcacagaggtcccagagacccgcaagagtgaa
tcccttaatccaatggatggaaagaaacaaaacatagagaagaagcaggagaagaagatg
ttgcctctgacggagcaggacatctgggagggagggataaaggtgaaaccacagaagaag
ataagcatcaacatcaacctggatttaaaaaggaaggaagagagcacagaaaaactggac
ttgtcttctttcgagagcatcgcagtaaaaacaagtgaggaaattgagacaactggtaac
ggagagaagttaaacaggggagcggcagaaattgaagtaaatgaaaagaaggaatccagc
agaaatcgggaaggtgagcctgaagatgaaataaaaccagaagaaagagaggcaaaacca
gtactgaagaaagatacccacagagacgatgagagagagatgaagacaaaagagcatagt
gaggaggaggactttgacttatggcattatgccttcagcggagcagaggagcagaagaag
gagagcaagaaacagtgggaggaacaagacaggacggaggccagcgaaggacgagagctg
tcgaatgacgagaggaggagcgcgagggaaggagcccaaacagaacggagagtgtggagt
gacggcggaggtagagagatggaagagtctatagcaggtccccagaaggagaagcagaga
gcagagggaggaaacctgccaaaggaggagctgatggagggagcaaagtggtggatgggg
aaagcagaagaagaagaaggcatgaccaagcccaagtcacagaggagcagagacgagagc
caccctcacagatcgaacaccgagctggacgatggcagcacatatgaggatcatgaggag
acaaagacggtgatgaaaactctggaggagttcacacaggacagagctgctgacagggag
gaggatctcactctcaaacaggtccctcgctccaaatgggaggaggaagagtctgaggaa
gaagagcaggaccaaccagagatcaaagttcaaaaggaggctcttgcagtgttcctgctg
ccgctgccatcatcatcatcatctgtgtctgtgacagcagagacgccaacggacaggaag
atggagggagagaaagaacaacagagacatagagaaatagagaacgggagggacagaggg
aggggaagggagggagagaaaaactccagaagtgtggctccctctagtggcagagacaga
cccgacaacacctcattaatggagagaggtggggagaggaggacagagatggagagaccg
aaagacagagagagaggaagggagagcgagaggccgagggacaggcagaaagagagcaaa
cgatctaaagagagaacgagggatgaagggagagggcgggacagggagacagagagggga
catggcagcaggaatctcccttcctcgtcacatgacagagagaggagagacaggcaccgg
ggggacgaccagagcggcgacaagagctcctggtgtcccggcaggaaatcctccagcggc
tcgataagcagagccggcgaaccacctgaccaaaatgcacacagaacatgtcgagacacg
ttccctgattggaaatgtaaagacaggagccgttgccaaaatccccgagacacatcaggc
aactacaggcaccaagacaggcctacggggacccgccactcccctccttccctctcccac
agctggggtaaagcgctaccgcccgaatcccccggagggtcagagctcaggaagcccaga
atgagcagccctggtcgggaattaacgcagagcaaggcagaaaagggggaatataagcga
aacagggtggataaggtagtaaaagagggcaaagtagagggcgatgctgacaaactgtgc
ggagggagagagctggaggagggggagaggcccagcagcaacagcgtcagtacatcagcg
agccaggagagcagtgacgacgacgacagtgacagaggtaaagagcagaagaagaagcac
agaaaggagaagagacaaggcgccctggagctcctggaggaaggagtgctgaagaaacac
aaacacaagaaggcaaagaagagcagagatggaggagcagaagggagcagtggagaggta
gacaacaagtggaaagaggaggaggaatgtgccaagctctgctcacttatgttattttga
DBGET
integrated database retrieval system
