Acanthopagrus latus (yellowfin seabream): 119014068
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Entry
119014068 CDS
T08233
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119014068 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119014068 (tbl3)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119014068 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119014068
NCBI-ProteinID:
XP_036944871
LinkDB
All DBs
Position
23:complement(12165132..12178568)
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AA seq
930 aa
AA seq
DB search
MANINLQFKTNYAVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHSVEH
DDQEDITSFALSCDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSLDCGIRLWDLR
SSQCVCVLESHYSAVTSLSFSSDGGTMVSSGRDKICTVWNLKSRKANRTVPVYEAVESVV
VLPQNKDYPEIGVTSKDLHFITAGSKGVLRVWEASTARCVYTQTLTAVSEVEEEDKEDDP
RSLMYLLHMPSSSRLATVTAEHNILLYQLPGLTTQQQFVGYSDEVLDVKFVGKDDSHIVV
ATNSCQLKVFELLTNSCQILYGHTDTVLSLDVFKKGFLFASCAKDRSVRVWQMDSTSGQV
HCVAQGSSHTNAVGTISCSRLKASFVVSGSQDCTVKVWDLPADLSTSKADVHQLTPRATE
KAHDKDVNSVAVSPNDKLVASGSQDRTAKLWSLAGEGNVGLLGVFRGHRRGVWAVCFSPV
DQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTI
KTNECVKTLDAHQDKVWGLHGSRKDDKMVTGSADSNITVWLDVTDVELAEEQAKQEDQIL
KQQELCNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQVEDSSELLEKTLLKLRLDQRE
SLLRYCVVWNTNARNCQDAQAVLQVLLTHVPPEELLQYQGARAHLEGLIPYTERHMQRIG
RLLQASMFLNYMWQKMRVAGAPSSASQDEEMDTTPLGQPFFTIDKEKGVGSGDEEKRDGD
DGDSGQDEDPNCPADEEDCDDEVSATKKASSNNEQIENGGSAKTNGNHHSESEESSEEED
VEGDEKVETTEKVVKCLPVPSTPQCQTFAS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatcaacctccagttcaaaacaaattatgctgtttccagcaagattgaaccg
ttttataaaggagggaaagtgcagatcagcaaagatgaaaagtacatcttctgcacctgc
ggatctcgtgtcaatgttttggagatcagcacggggaagatcgtccacagtgtggagcat
gatgatcaagaagacatcacatctttcgcactgagctgcgatgacgagctgctggtcaca
gccagccgagctctgctgctcaagcagtgggactggaggcaagctcagtgtacgcgctcc
tggagggccattcacactgttcctgtagccagcatgacctttgactccacctctactctc
ctggccacaggtgggtgtgatggcacgataaagctttgggatgtggtgaagcagtactgc
acccacaacctgaaagggtcatctggggttgtacacctggtacagttccacccagacatc
agccggctgcagctcttctcctcctccctggactgtggcattcggctgtgggacctgcgc
tccagtcagtgtgtgtgtgtgctggagagccactacagcgctgtgacctccctcagcttc
agctccgacggtggcaccatggtcagctctggcagagacaagatctgcacagtgtggaac
cttaagagtcggaaagccaacagaactgtacctgtctatgaggctgtggagagtgttgtt
gttctgcctcagaataaagactaccctgagatcggagtgacgagcaaagacttgcatttc
atcacagctggcagcaaaggtgtactgagagtgtgggaggccagcacggcgcgttgcgtc
tacacccagaccctcacagccgtctctgaggtggaggaggaagacaaggaggacgacccc
cgcagcttaatgtacctccttcacatgccctcctcctccagactggcaacagtcacggca
gaacacaatatcctgctctaccagctgcctggtctcaccacacagcagcagttcgtgggt
tacagtgacgaggtgctggacgtgaagtttgtgggtaaagacgacagccacatcgtggtg
gccaccaacagctgccagctgaaggtgttcgagctgctcaccaacagctgccagatcctg
tacggacacacagatactgtcctctcattggacgtgttcaagaaaggctttctctttgca
agctgtgcaaaggacaggtcagtgcgtgtgtggcagatggacagtaccagtggtcaggtg
cactgtgtggcccagggctccagccacaccaatgctgtgggcaccatcagctgctccagg
ttgaaagcgtcctttgtagtgtctggcagtcaggactgtactgtgaaggtgtgggatctg
ccggcagacttgtccacgtccaaggcagacgtacatcagctcacccctcgcgccacagag
aaggcacacgataaggatgtcaacagcgtggccgtgtcgcccaatgacaagctggtggcc
tcgggctcccaggaccgcacagccaagctgtggtcgctggcgggggaggggaatgtgggc
ctcctgggggtgtttcggggtcaccggcgcggcgtctgggccgtctgcttctctcccgtc
gaccaggtgctcgccacgtcctccgctgacggcaccaccaagctgtggagcctgcaagac
ttcagctgcctcaagacgttcgagggccatgatgcgtcagtgttgaaggtcatctttgtg
agccggggcactcagctgctcaccagtggctccgatggtttagtaaagctgtggaccata
aagaccaacgagtgcgtgaagacgctggacgcccaccaggacaaagtatggggtctccac
ggcagccgcaaggatgacaagatggtgaccggctcggcggactctaacatcactgtgtgg
ctggatgtgactgatgtggagcttgcagaagagcaggccaaacaggaggatcagatactc
aagcagcaggagttgtgcaacctgctccatgagaagaagtatctgaaggccctgggtctt
gccatctcgctggaccagcctcacactgtgctcactgtgatcaaagcgatccgacaggtg
gaggatagcagcgagctgttggagaagacgctgctgaagcttcgactggatcagagagag
tcgctcctgcgctactgcgtggtgtggaacaccaacgccaggaactgtcaggatgctcag
gccgtcctgcaggtgctcctcacacacgtgccaccagaggagctgctgcagtaccaggga
gcccgagcccacctggagggactcatcccatacacagagcgacacatgcagaggattggc
cgtctgctgcaggcgtccatgttcctgaactacatgtggcagaagatgagggtggccgga
gcaccgtctagcgcgagccaggatgaagaaatggataccactcctcttggacagccattc
ttcacgattgacaaggagaaaggagtgggcagcggcgacgaggagaaacgagacggagat
gacggcgacagtggacaagatgaagatccaaactgcccagctgacgaagaagactgtgat
gatgaggtcagcgccaccaagaaagcctccagcaacaacgagcaaatagaaaacggaggg
agcgccaaaacaaacggcaatcaccactctgaaagcgaggagagttcagaagaggaggac
gtggagggagatgagaaggttgaaacgacagaaaaagtagtgaaatgtctcccggttccc
tccactccacaatgccagacattcgcaagctga
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