Acanthopagrus latus (yellowfin seabream): 119014273
Help
Entry
119014273 CDS
T08233
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04137
Mitophagy - animal
alat04144
Endocytosis
alat04340
Hedgehog signaling pathway
alat04350
TGF-beta signaling pathway
alat04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119014273 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119014273 (smurf2)
04350 TGF-beta signaling pathway
119014273 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119014273 (smurf2)
04137 Mitophagy - animal
119014273 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
119014273 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119014273 (smurf2)
04121 Ubiquitin system [BR:
alat04121
]
119014273 (smurf2)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119014273 (smurf2)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119014273 (smurf2)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119014273 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
119014273 (smurf2)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119014273 (smurf2)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119014273 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
119014273
NCBI-ProteinID:
XP_036945184
LinkDB
All DBs
Position
23:5753891..5803804
Genome browser
AA seq
772 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLSPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPTSGGDQRAQERRVR
SQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCE
ELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSHRGIESQNV
SRQNQLKDQAQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIE
VSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKP
ITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQD
TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDIND
WKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPR
LFTIHQIDASTNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcggaatggccccgtgaagctgcgactaacagtcctctgc
gccaaaaacctggtgaagaaagacttcttccgcctccctgatccctttgccaaggttgtc
gtggacggttcagggcaatgccactcgacagacactgtgaggaacacacttgaccccaag
tggaatcaacactatgacctatacattgggaagtcagattctatcaccatcagcgtgtgg
aatcacaagaagattcacaagaagcaaggggctgggttcctgggctgcgtccgccttctg
tccaacgctatcaaccgccttaaagacacaggctgtaagtaccagagactggacctgaac
aagctgagtcccaacgacagtgacacagtcagaggccagatagtggtgagtctgcagtcg
agggaccggataggcacaggaggccctgtggtggactgcagtcggctgtttgacaatgat
cttccagatggctgggaggagaggaggacagcgtctggacggatccagtacttgaaccac
atcacacgcaccacacagtgggagaggcctaccaggcctgcatcagagtactccagccct
ggccggcctctcagctgcattgtggatgaaaacacacccattagcacgaatggggccacg
cccaccacagcgttgccgaccagtggcggggaccagcgggcccaggagagacgggtccgc
tcccagaggcaccgcaactacatgagcagaacccacctgcacacgccacctgacctccct
gagggatatgagcagaggaccacgcaacaaggccaagtgtactttctccacactcagaca
ggtgtcagcacgtggcatgaccccagagtacccagagatctgagtaatgtgaactgtgag
gaactgggtcctttacctcctggatgggagatacggaacaccgccaccgggagggtttac
tttgtcgaccacaacaaccgaaccacacagttcacagacccgcgcctctccgccaacctg
catctagtcctcaatccgagtcccaatggttctcatagaggcatagaaagtcagaatgtc
agtcgtcagaaccagctgaaggatcaggcccagcaggctctggtgtcccccggtcagctc
ccagaggaggccgagtgcctcacggtgcccaagtacaagagagaccttgttcagaagctc
aagatcctccgccaggaactgtcccagcagcagcctcaggctggccactgccgcatcgag
gtgtcccgtgaggagatctttgaggaatcatatcgacaggtgatgaagatgaggccgaag
gacctgtggaaaaggctaatggtgaagtttagaggagaagaggggctggattatggagga
gtcgccagggagtggctctacctgctgtcccatgagatgctgaacccgtactacggcctg
ttccagtactcacgtgatgacatttacacactgcagataaacccagactctgctgtcaac
cctgagcacttgtcatacttccacttcgtcgggcgtatcatggggatggcggtgttccat
ggccactacatagacggaggcttcactctgcccttctataaacagctgctgggtaaaccc
atcaccctggatgacatggagtctgtcgaccccgacctgcacaacagccttgtgtggatc
ctggacaacgacatcacaggtgtcctggaccacaccttctgtgtagaacacaacgcctac
ggagaaatcatccagcacgagctcaagcccaatggtaagagcatccccgtcacccaagac
accaagaaagagtacgttaggctctacgtcaactggcgcttcctgcgaggcatcgaggct
cagttcttggctctgcagaagggctttaacgaggtcatcccccagcacctgctgaaggca
tttgatgagaaggagcttgagctgattgtatgcggcctaggcaaaatcgacatcaatgac
tggaagtccaacacacggctcaaacactgcaccccagacagcaacattgtgaagtggttc
tggaaagccgtggagtcgttcgatgaggagcgcagagcccggctgctgcagtttgtcacc
ggctcttccagagttcccctgcaaggcttcaaggcgctccaaggtgctgctggcccacgg
ctcttcaccatccaccagattgatgccagcaccaacaacctgcccaaagcccacacctgt
tttaatcggatcgacattcctccctacgagcactatgacaaactatatgacaagctgctc
actgccattgaggagacgtgcggctttgctgtggagtga
DBGET
integrated database retrieval system
