Acanthopagrus latus (yellowfin seabream): 119014286
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Entry
119014286 CDS
T08233
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04137
Mitophagy - animal
alat04144
Endocytosis
alat04340
Hedgehog signaling pathway
alat04350
TGF-beta signaling pathway
alat04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119014286 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119014286 (smurf1)
04350 TGF-beta signaling pathway
119014286 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119014286 (smurf1)
04137 Mitophagy - animal
119014286 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119014286 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119014286 (smurf1)
04121 Ubiquitin system [BR:
alat04121
]
119014286 (smurf1)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119014286 (smurf1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119014286 (smurf1)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119014286 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119014286 (smurf1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119014286 (smurf1)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119014286 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119014286
NCBI-ProteinID:
XP_036945199
LinkDB
All DBs
Position
23:complement(7076627..7094315)
Genome browser
AA seq
734 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQESRLQAQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIIRYSQQSQAKESSQAPQMDVGGEEVGGGGVGGGGGGGDGDVAARYERDLVHKLK
LLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGV
AREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHG
HYINGSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFG
KFLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPF
DHKELELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTG
STRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEK
LLTAVEETCGFAVE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtt
gtggtggatgggtcgggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactccatcaccatcagcata
tggaaccacaaaaagatccataaacgacagggggcgggcttcctgggctgcatacgactt
ctttccaatgccatcagcaggctgaaagacacaggataccagcgtttagatctatgtaaa
ctgaacccctcagacagtgacgcagtgcgaggacagatagtagtgagcttacagacgcga
gaccgcattggcagcggaggccctgtggtggactgcagaggactgttggaaaacgatggg
cctgtgtttgagggatgtttcagtgaagagccgctgccctactccgaccccactggcgcg
gcagggggagggaactgtcggctcgactcgcccagtcaagagagtcgtcttcaagcgcag
cgaatcagagggcaggattcaagaggccatggccacacccctcaaaacagacctcacggg
caccaaccacctgacctgccagagggatatgagcaacgaacaacagtgcagggccaggtt
tattttcttcacacacagacaggtgtcagcacctggcatgacccccggataccacgggat
ctggccagtgtgagctgcgaggagcttggacctttaccagtgggctgggaggtccgaagc
actgtgtcgggtcggatctacttcgtggaccacaacaaccgaaccacacagttcacagac
ccgcgcctgcacaccatcatcaggtacagccagcaatcccaagcgaaggaatcctcccag
gccccccagatggatgtggggggtgaggaagtgggaggcgggggagtgggtgggggtgga
ggaggtggagatggagatgtggcagcacgctacgagagagacttggtccacaagttgaaa
ctgctccgccacgagctgtccctgcagcagcctcaggcaggacactgtcgcatagaggtg
tcccgagaggaaatctttgaggagtcgtatcggcagatcatgaagatgaggcccaaagac
ctgaagaagcgtctgatggtgaagttcaggggagaggagggcctcgactatggaggggtg
gccagggagtggctgtacctgctatgtcatgaaatgctgaacccctattacggcctgttc
cagtactcaacagacaatatctacacactacagatcaaccccgactcctccatcaaccct
gaccacctgtcatatttccactttgtgggtcgtgtgatgggcctggcagtctttcatggt
cactacatcaacgggagtttcacgctgcccttctacaaacagctgctaggcaaaccgatc
cagctcaacgacctggagaccaccgacccggaattgcacaagagcctcgtctggatatta
gagaacgacatcacttcagtcctcgaccacacattctgcgtagagcacaatgcctttggg
aagtttttacaacatgagctcaaaccgaatggccgcaatatccctgttactgaggaaaac
aaaaaagaatatgtgagactttatgtgaactggaggtttatgcgtggaatcgaagcccag
tttctggctctacagaagggattcagtgagctcatcccccagcacctcctcaaacccttc
gaccataaagaactggagttgatcatcggtggactggggaagatagaccttgcagactgg
aagacaaacacccgcctgaagcattgcacaagtgaaagcaacgtggtgcggtggttctgg
caggcagtggaggccttcagcgaggagaggagaggacgcctcctgcagtttgtcacgggc
tccaccagggtccccttacaaggcttcaaagcattgcagggttctacaggttctgcagga
ccaaggctcttcaccatccacttgatagatgccaacacagacaacctgcccaaggctcac
acatgttttaaccggatagacatccctccctacgagtcttatgagaaactttacgagaaa
ctgctgacggctgtggaggagacctgcggcttcgccgtggagtga
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