Acanthopagrus latus (yellowfin seabream): 119014347
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Entry
119014347 CDS
T08233
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
alat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119014347 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119014347 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119014347 (mgrn1b)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119014347 (mgrn1b)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119014347 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119014347
NCBI-ProteinID:
XP_036945317
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All DBs
Position
23:19914212..19922413
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AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKIDF
NEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHEEHSGTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGGDGRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSSSPAPTDGTATEDVAESLSPDDEDR
MHAGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPASSI
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcagaatcgctggtgttgaggatatcgatatccaggccaac
tcggcctatcgatttccaccaaaatcggggaattactttgcgagccacttcttcatggga
ggagagaaattcgacacaccacatcctgagggataccttttcggagaaaacatggacctg
aattttcttggaaataggccggtgcagttcccatacgtgacgcctgcacctcacgagcct
gtgaaaactctgaggagtctggtcaacatcagaaaggactctttgcgtttggtcaggtat
aaagatgactctgacacaccggtggaagaaggtggaaaaccaaaggttcagtacggtgtg
gagttcaccttcgatgctgatgcacgagtggccatcactctctactgtcaagcatttgag
gagttctccaacgggatggcagtgtacagccctaagaatccgtcgctggtctctgaaact
gtgcactacaagcgaggggtgagccagcagttctccatgccgtctttcaaaatcgatttc
aacgagtggaaagaggaagacctgaactttgacctggaccgaggagtgttccccatggtg
atccaggctgtggttgatgaaggggacgactgcctcggacatgctcacgtacttttggca
gcctttgaaagacatgttgatggcagtttctccgtcaagcctctgaagcagaagcagatt
gtggaccgtgtgagctacctcttacaggagatctatgggatcgagaacaagaacaaccaa
gaaaccaagccctcagacgatgagaacagtgacaacagcaacgagtgtgttgtctgtctg
tctgacttgagagatacgctcatcctgccctgcagacatctgtgtctctgcaactcctgc
gcagacacgctgcgttaccaggccaacaactgtcccatatgcaggctgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcctggggctctttcccccgtgtctttcagc
cctgttctggctcagactatggaccacgaggagcactcaggcacagactcagttcctccc
ggctttgaacccatctcactgttggaggctttgaatggtctgcggtcagtgtctcctgcc
atcccgtctgcccccctctatgatgaaatcaacttctcagggggtctgggaggtgacggc
agacagctgagctccccggagcatttaagtgatggcagtctgcagaaaggaaaagtcagc
aagtcacctgacagcacccttcggtctccatcctctcccatccaggaggaagatgaagag
aagctgtccgagatgtctgacgctcagccgcacacaatgctgtccagcagccctgctccc
acagacggcacagcaaccgaggatgtggcagaatccctgtctccagatgatgaggacagg
atgcatgctggaggagacatcctacaggactgcagcagtgaacacagcagcttgaccaaa
acagagagcgacccaccgggcgacttgtctctgccagggtcatcagaatcaacagaaagc
ctgaaaagtcagagcacaaactgttccagccagcctctcctgtgtcctgcgagcagcatt
catatggaggatgagcacctcaacccctga
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