Acanthopagrus latus (yellowfin seabream): 119014361
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Entry
119014361 CDS
T08233
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03320
PPAR signaling pathway
alat04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119014361 (rxrba)
03320 PPAR signaling pathway
119014361 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119014361 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alat03310
]
119014361 (rxrba)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119014361 (rxrba)
Nuclear receptors [BR:
alat03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119014361 (rxrba)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
119014361
NCBI-ProteinID:
XP_036945355
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All DBs
Position
3:3383149..3403852
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AA seq
506 aa
AA seq
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MQLTASCSSKCQLNTNHSKNKIFINKAACIIKISTNGRMMEDSRSPDSSSVSSPPSGQRS
PPLVPSAAASMTSLPPITTSGVNSPISSIGSPFSVISSSLGSPCLPGTPSVGYGPISSPQ
INSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPMLSQKRLCAICGDRSSGKHYGVYSC
EGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQYCRYQKCLAMGMKREVAKMNDRSV
QEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAVEQKTELHADGSSGGSSPNDPVTNI
CQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSISVKDGILLAT
GLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILF
NPDAKGLSNSSEVELLRERVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHL
FFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcacagccagctgcagcagcaagtgccaactaaatacaaaccacagcaaaaac
aaaatattcataaataaagcagcttgcatcataaaaatttcaacaaatggaaggatgatg
gaggattctcgcagcccagacagctcgtctgtctcctcccctccgtcgggccagcgctcg
cctccgctggttccctcggctgcagcttccatgacctccctccctcccatcaccacctca
ggggtcaacagccccatcagtagcattggctcccccttttctgtcatcagctcttctctg
ggctcgccatgcctgcctggcacaccgtcggttggttacggccccattagcagcccacag
atcaactcaacagtgtccatgtcggggctccatgcagtgagcagctctgatgatgtgaaa
cctccgttgggcttgaagcagctctcgtcccacagcccagggccgatgctttcccaaaaa
cgcctgtgtgccatctgtggagacagatcctctggtaaacactacggtgtctacagctgt
gagggctgtaaaggcttcttcaagcggaccgtgcgcaaagacctgacctacacctgtcgg
gacaacaaagactgtatggtggataagaggcagaggaaccgctgccagtattgtcgctac
cagaagtgcctggccatgggcatgaagagagaagtggccaagatgaacgacagatctgtc
caagaggagcgacagaggaacaaggaacgggaaggcgaggtggagtcgactagtgcagtg
aacgaggagatgccagtagagaagattttggaagcagagatggctgtagagcaaaagacg
gagcttcatgctgatggaagctcaggcggcagctctcccaacgaccctgtcaccaacatc
tgtcaggcagcagacaagcagctctttaccctggtggagtgggccaagaggatccctcac
ttctctgaactgcccctggacgaccaggtcatcttgctccgtgctggctggaatgaactc
ctgattgcatcgttctcccatcgctccatctctgtgaaggacgggattctgctggccacc
ggcctgcatgtccacaggaacagtgctcacagtgcaggtgttggagccatctttgacagg
gcgcacaatgctgaggttggggccatatttgacagagttttgacagagcttgtaagcaag
atgagagacatgcagatggacaagacagagctgggctgccttcgagccatcattctgttc
aacccagatgctaagggtttgtccaactccagtgaggtggagctcctgagagagagagtg
tacgcatctctcgagtcctactgcaaacagaagtatcctgatcagcagggcaggtttgca
aagctccttctgcggctcccagcactgcgctccattggtctgaagtgcctggagcacctg
ttcttctttaaactgattggtgacacgcccatcgacaccttcctgatggagatgctagaa
gcgcctcaccagctcacctag
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