Acanthopagrus latus (yellowfin seabream): 119014388
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Entry
119014388 CDS
T08233
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03440
Homologous recombination
alat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119014388 (top3a)
03460 Fanconi anemia pathway
119014388 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119014388 (top3a)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119014388 (top3a)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119014388 (top3a)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Topoisomerases
119014388 (top3a)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119014388 (top3a)
FA (Fanconi anemia) pathway
119014388 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
119014388
NCBI-ProteinID:
XP_036945400
LinkDB
All DBs
Position
23:complement(6846466..6862987)
Genome browser
AA seq
1018 aa
AA seq
DB search
MVVYLLGRALLRSGLQRLGLQRRCFCAAQSVLNSDTSQQADMIRNRTQIKRVLCVAEKND
AAKGISEIMSNGRSSRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLALEFKAPFQK
WHSCNPVLLFDAEVEKYCPDNMMQIKRTLEKEARQCQALVIWTDCDREGENIGFEIIDVC
KAVRPNLQVFRAKFSEITPNSIRRACETLMAPDANISDAVDVRQELDLRIGASFTRFQTL
RLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEFS
WKRNRLFNHTACLVLYQICMEDPIATITSVTSKPKSKWRPLPLDTVELEKLASRKLRISA
KETMKIAEKLYTQGYISYPRTETNIFPQTLALGPLVEQQIQSPNWGAFAQRVLDQPGGPN
PRQGKKSDQAHPPIHPTKYSNTLQGNEGRLYEFIVRHFLACVSQDALGQETVVDIDIAQE
KFSASGLMIIARNYLDVYPYDKWNTKLIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEADL
ISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGRKDKQSVLQHYIQKYKAVFIESARKAKKLDEALSPYLGAAQEITE
EEEQDMEIPLPVRKCPNCGRDMVLKKKREGNGKYLSCVGFPDCKTAVWFPDTALEVSRDN
SVCSTCQPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRGGGGGRGD
NRRPPAPLPPRPNPPRAPSSNPRPSLPAEPSWTTQPRPPPSPGGGGVIADANSDVIVCNC
GQDALLLTVRKDGPNQGRQFYKCGAGSCNFFLWADEPSQQGAPQNPQPPRPSLGFRNTPA
AGIGQQGGVGEHPGQSMCNCNETAVMRTVQKDGPNKGRMFHTCGKPRDQQCGFFQWADEN
APPSGGFGGGFNGGRDGWKKGRKITGDATANKPPAAKKARTCGICHMPGHTRVTCPQR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgtacctactggggagagccttgcttcgatcgggactacagcggctagggctc
caacggaggtgtttctgtgcggcacagagtgtcctgaactctgacacttctcagcaggca
gacatgatccgcaaccggactcaaatcaagagggtcctctgcgtcgccgagaagaacgat
gcagccaaaggcatttcagagatcatgtccaacggcaggtccagcaggagggaagggatg
tcgaagtttaacaaaatctatgagtatgaatatcatctctttggtcagaatgtgacagta
acaatgacatcagtatcaggccatttactcgctcttgagttcaaagcaccattccagaaa
tggcacagttgtaatccagtgctgttatttgatgctgaggtagagaagtattgtccagat
aacatgatgcaaatcaagcggacactggagaaggaggcgaggcagtgccaggccttagtc
atctggactgactgcgacagagagggagaaaacattggctttgaaatcatagatgtctgc
aaagcagtgaggcccaatttacaagtctttcgagcaaagttttctgagatcacccccaac
tctattcggagagcatgtgagactctaatggcgccagatgctaacatcagtgatgctgtt
gatgtgcgtcaggagctggacctgcggataggtgcgtccttcactcgattccagacgctt
cgcctgcagaaaatctttcccgagtctctggccaatcagctgatctcatacggcagctgt
cagtttcccactctgggcttcgtggtggagcgcttcaaagccatccaggctttcataccc
gagactttctacaagatcaaagtgctgcacgaggtggaggaggacaccgtagaattcagc
tggaagagaaaccgtctcttcaaccacacagcttgcctggtgctctaccagatctgcatg
gaggatcccatagcaacaatcacctcagtaaccagcaaacccaagagcaagtggagaccg
ctgcctttggacactgtggaactggagaaactggcatctcgcaagctaaggataagtgcc
aaagagaccatgaaaattgcagagaaactctatacccaggggtatatcagctacccccgt
acagagacaaacattttcccccaaaccctggccctcggcccgctcgtggagcagcagata
cagagccccaactggggggcgttcgcccagcgggtgctcgaccagcctgggggtccgaac
ccccggcaaggcaagaaatctgaccaggcccatccccccatacaccctaccaagtacagc
aatacactgcagggcaatgaaggacgtctgtatgagttcatcgtcaggcacttcctggct
tgtgtttcccaggatgctttggggcaggagaccgtggtagacatagacattgcccaggag
aagttctccgcctcgggactcatgatcattgcaaggaactacctggatgtttacccgtat
gacaagtggaacaccaagctgattccagtgtacgagcaaggctcccagttccagccctct
gctattgagatggtggacggacagacgagtcctccgcagctgctcactgaagctgaccta
atatcactgatggagaagcatggcattggcacagatgcaactcacgcggagcacatcgag
actataaagagtcgcatgtacgtgggcttgacagcagaccagaggtttctccctggggag
ctcggcatgggactggtggagggttacaactccatgggctatgagatgtccaaaccaaac
ctgcgtgctgaattggaggccgacctcaagctggtatcagagggcaggaaggacaaacag
agcgtgcttcagcattacatccagaaatacaaggctgtcttcatcgagtctgccaggaag
gcaaaaaagttagatgaagccttgtctccatatctgggtgcagctcaagaaatcactgaa
gaagaggagcaggatatggagatcccattgccagtcaggaagtgccctaattgtgggcgg
gacatggtgttgaagaaaaagagggaaggaaatggtaagtacctgtcctgcgtgggcttc
ccagactgtaagacagcagtgtggttccctgacacggcgctggaggtcagcagagacaac
agcgtctgctctacctgtcagccgcaccctgttcacatgttgaagttcaagttccgcagg
ggcagcctcccccccatgatgcctttagagtttgttggctgcatcggtggatgtgatgag
acactcagagaggtgctagacctgaaatacctccgaggaggaggaggaggaagaggagac
aaccgtcgtccaccagcacctttgccccccagaccaaatccacccagagccccaagttca
aatccccgaccttcccttcctgctgaaccctcctggactacacaaccgcgacctccacct
tctccaggtggcggcggtgtcattgcagacgctaacagtgatgtcatcgtgtgcaactgc
ggtcaagatgcgctcctcctgaccgtgcgaaaagacggtcccaatcaaggtcgccagttc
tacaagtgcggcgctggcagctgcaacttctttctgtgggcggacgagccaagtcagcag
ggggcaccgcagaacccacagccccctaggccatctttgggtttcaggaacacccctgca
gcaggcatagggcagcaagggggcgtgggggaacatccaggccagtcgatgtgcaactgt
aatgagacggcagtgatgcgcacggtgcagaaagacggcccgaacaagggacggatgttc
cacacctgcgggaagcccagagaccagcagtgtggcttctttcaatgggccgatgagaac
gcacctccatcaggtggttttggtggtggatttaatggcggtagagatggatggaagaaa
ggaaggaagatcacgggtgacgccacggcgaacaaacccccagctgctaagaaagcccgt
acctgcggcatctgccacatgccgggacacacccgagtcacctgtccccagcggtga
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