Acanthopagrus latus (yellowfin seabream): 119014427
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Entry
119014427 CDS
T08233
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00310
Lysine degradation
alat00514
Other types of O-glycan biosynthesis
alat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119014427 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119014427 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
alat01003
]
119014427 (colgalt1a)
Enzymes [BR:
alat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119014427 (colgalt1a)
Glycosyltransferases [BR:
alat01003
]
O-Glycan biosynthesis
O-linked Gal type
119014427 (colgalt1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
119014427
NCBI-ProteinID:
XP_036945490
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All DBs
Position
23:complement(20927954..20936840)
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AA seq
610 aa
AA seq
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MSGLSCLPAALLLLLLSSCGPARGYFAEERWNPESPLLAPRVLLALVCRNSEHSLPYFLG
TIERLNYPKDRMALWVATDHNEDNTTAILRDWLVKVQNLYHYVEWRPKEEPRRYRDEEGP
KQWTDTRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPDVLWKLMKENKTIIAPML
ESRAAYSNFWCGMTSQGYYKRTPAYIPMRKFVRKGCFAVPMVHSTFLIDLRKEASRQLAF
HPPHPEYSWAFDDIIVFAFSARMADVQMFVCNKENYGHLPVPLRAHNTLQDEADSFLHSL
LEVNVRNPPVMPSKYIPAPRKQPDKMGFDEVFMINLKRRTDRRDRMLRTLYEQEIACKVI
AAVDGKAMNISEVQAMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERGLDTSL
VIEDDLRFEIFFKRRLMNLMREVEEEGLDWDLIYIGRKRMQIDHPEKAVPNIHNLVEADY
SYWTLGYMISSQGAMKLLKAEPLKKILPVDEFLPIMFNKHPVSDYMEQFETRNLKAFSAE
PLLVYPTHYTGDNGYISDTETSTVWDNDKVRTDWDRARSGKTHEQAKISTEAQNSDVLQS
PLDSTAREEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggctctcctgcctccccgccgccctgctcctcctgctgctgtcctcctgcggt
cctgctcggggatatttcgccgaggagcgctggaaccccgagtctccgctgctcgccccc
cgggtcctcctcgccctcgtctgcaggaactccgagcactctttgccgtatttcctcggc
accattgagcgtctcaactacccgaaggaccgtatggctctgtgggtagcaactgatcat
aacgaggacaacaccaccgccattctgcgcgactggcttgtcaaggtgcagaacctttac
cattatgtggagtggaggccaaaagaggaacccaggcgttatcgggatgaagagggtccg
aagcagtggacagacacccgttatgagcacgtaatgaaacttcgccaagtagcactggag
tcagctcgcgagatgtgggcggactactttatgttggtggactgtgacaacctcctcacc
aatccagatgtgctctggaagctcatgaaagagaataagaccatcatcgctccaatgctt
gaatcccgtgcagcctattcaaacttctggtgtggaatgacctcccagggttactataag
cgcacccctgcctacatacctatgaggaagtttgtgcgtaagggctgttttgcagttccc
atggtccactccaccttcttgatagacctgaggaaagaggcgtccagacagcttgccttt
cacccgccacacccagaatacagctgggcttttgatgacatcattgtgtttgccttctct
gcccggatggcagatgtccaaatgtttgtgtgtaataaggagaactatggtcaccttccc
gttcctctgcgagcccacaatactttacaggacgaagctgacagcttcttacactccttg
ctggaggtaaatgtgcgaaatccaccagtgatgccctccaaatacatacctgctcctaga
aaacaacctgacaaaatgggcttcgatgaggtgtttatgataaacctgaaaaggcgcact
gaccgccgagatcgtatgctgaggacattatatgaacaggagattgcatgtaaggtcatt
gcagctgtagatggaaaagcgatgaatatcagtgaagttcaagctatgggcatccacatg
ctccctggctacagtgacccctatcatggtcgcccactgacaaagggagagctgggatgc
ttcctctcccactataacatctggaaagagattgtggaacgaggcctggacacctccctg
gtgattgaagacgatctgcgctttgagatcttcttcaaacgccgcttgatgaacttgatg
agggaggtggaggaagaaggactggactgggatctcatttacattggtcgcaagagaatg
caaatagatcacccagagaaagcagtgcctaacatacacaacttggtggaagcggactat
tcatactggacacttggttatatgatatcgtcacaaggtgcaatgaagcttttgaaagca
gaaccactcaagaagattttgccggtggatgagtttcttcctatcatgttcaataaacat
cctgtgtctgattatatggaacagtttgaaaccaggaacctgaaggcattttcagccgag
cctcttctagtgtatccaacacactacacgggcgacaacgggtacatcagcgacactgag
acctccacagtgtgggataacgacaaggtccgtacagactgggacagagcgcgctcagga
aaaactcatgagcaggcaaagatcagcactgaggcccagaactcggatgtgctccagtcg
cctttagacagtacagctcgggaggagctatga
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