Acanthopagrus latus (yellowfin seabream): 119014433
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Entry
119014433 CDS
T08233
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119014433
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119014433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
C5orf34_2nd
Motif
Other DBs
NCBI-GeneID:
119014433
NCBI-ProteinID:
XP_036945499
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Position
23
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AA seq
481 aa
AA seq
DB search
MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLLGAEYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQNDPEDGEQTHISPNAIFKALQQADSPASSLGEVHSPGEHSGQSQGPPTPPTTPKT
DLPSSKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPHS
HAGMPGATQAGYTGSYGISSSSVGQGPNVGAHAWMSKQQQQQQQHSLTTLGGGGEQGQQG
QQRTTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSASSYPSITRAQYDYSDHQGGAN
SYYSHAAGQGSGLYSTFSYMSPSQRPMYTPIADNTGVPSVPQTHSPQHWEQQPIYTQLSR
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacagaagaacaggagaagtgtcactccgac
gctcccagccccagcatgtcggaggactccgcgggctcgccgtgcccgtccggctccggc
tcggacaccgagaacacccggccgtccgacaaccacctcctcctgggcgcagagtacaag
aaggagggcgaggaggagaagttccccgtgtgcatcagagacgccgtgtcccaggtgttg
aagggctacgactggacgctggtgcccatgccggtgcgcgtcaacggctccagcaaaaat
aaaccgcacgtcaagagacccatgaacgcgttcatggtctgggctcaggctgcacggagg
aagctggccgatcaatacccgcacctgcacaacgcggagctcagcaaaactctgggcaaa
ctctggagactgctcaacgaggtggagaagcggccgttcgtggaggaagccgagcgcctg
agagtgcagcacaagaaggaccaccccgactacaaataccagccgaggcggaggaaatcg
gtcaagaacgggcagaacgacccggaggacggcgagcagacgcacatctccccgaacgcg
atcttcaaggcgctgcagcaggccgactctcctgcgtccagcctgggcgaggtgcattca
cctggagagcactcaggtcagtcccagggccctccgacgcccccgaccacccccaagaca
gatctcccctccagcaaagccgacctgaagcgcgagggccgccccatgcaggagggcacc
agtcgccagctcaacatcgacttcggcgccgtcgacatcggcgagctgagcagcgaggtc
atctccaacatggggagcttcgacgtcgacgagttcgaccagtacctgccgccccacagc
cacgcagggatgcccggggcgacccaggctggctacaccggcagctacggcatcagcagc
tcctcagtcggccaggggcccaacgtgggggcccacgcatggatgtccaagcagcagcag
cagcagcagcagcactctctgaccaccctgggcggaggaggagagcaaggccagcagggt
cagcagagaaccacccagatcaagacagagcagctgagcccgagccactacagcgagcag
cagggctccccgcagcacgtcacctacgggtccttcaacctgcagcactacagcgcctcc
tcttacccctccatcacgagagcacagtatgactactcagaccaccaaggcggcgccaac
tcctactacagccacgcggcgggccaaggctccggcctgtactccaccttcagctacatg
agccccagccagaggccgatgtacaccccaatcgccgataacaccggggtgccctccgtg
cctcagacgcacagtccgcagcactgggagcagcagcccatttacacgcagctctccagg
ccgtga
DBGET
integrated database retrieval system
