Acanthopagrus latus (yellowfin seabream): 119014835
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Entry
119014835 CDS
T08233
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119014835 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
119014835 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119014835 (thoc6)
03041 Spliceosome [BR:
alat03041
]
119014835 (thoc6)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119014835 (thoc6)
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119014835 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_EIPR1
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
Beta-prop_ACSF4
WDR54
MIOS_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
119014835
NCBI-ProteinID:
XP_036946236
LinkDB
All DBs
Position
23:24780393..24786089
Genome browser
AA seq
324 aa
AA seq
DB search
MCFSVQLLHMSVFSQSFSPCGRYLAAGNNYGEIALFSLSAALSPDATALSQKPVLTFTAH
EGPVFALISSDCHLLSAGNGEIRAWSWTELIKKNIKPLWTKRPNYKSSLEIPEINAMIIN
PRDNSLVVGGGDNNVHILDLEHGVFKSVLQGHTDYIHCVSVREREADILSGGEDGAVRIW
DSRMDQSVHCIEVYKYESCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSIF
PLTGCQRQAAFHQDMILAVGDGPFVSHCLLGGEVKAQIPCTPQSLNTLQINTNSTEHRVL
TAGGSSDHIDVFTNLSYRAFSLSF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcagtgtgcagctcctccacatgtcggtcttctctcagagtttttctccctgc
ggtcgatacctggcagcaggaaacaactacggagagatcgccctcttcagcctgtctgca
gctctgagtccagacgccaccgctctgagtcagaaacctgttctcaccttcacagctcat
gaaggtcccgtcttcgctctcatctcctccgactgtcacctcctcagtgcaggaaacgga
gagatcagagcctggagctggaccgagctcatcaagaagaacatcaaacctctgtggacg
aaaagaccgaactacaagtccagcctagagatcccagagatcaacgcaatgatcatcaac
cccagagataatagtctcgtggtcggaggaggagacaacaacgtccacatcctggacctg
gaacacggagtcttcaagtcggtccttcagggtcacaccgactacatccactgtgtgagt
gtgagagagcgggaggccgacatcctgtcagggggcgaggacggcgccgtgaggatctgg
gacagcaggatggatcagtctgttcactgcatcgaggtttacaagtacgagagctgtgct
cggcctcagtacggtaaatggatcagctgtgtgaccactgactctgactggatgctgtgt
ggtggaggtccgtctctgtctctgtggcacctccgctctctgtccccgacctccatcttc
cccctgacaggctgccagagacaagctgccttccaccaggacatgattctggctgtaggt
gatggtccattcgtgtctcactgtctgctgggtggagaagtcaaagctcagatcccctgt
acaccacagagcctcaacactctgcagatcaacaccaacagcactgagcacagggtactg
acagcaggaggcagcagtgatcacatcgacgtgttcaccaacctgtcctacagagccttc
tcactcagcttctga
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integrated database retrieval system
