Acanthopagrus latus (yellowfin seabream): 119014836
Help
Entry
119014836 CDS
T08233
Symbol
si:ch211-81a5.1
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119014836 (si:ch211-81a5.1)
04121 Ubiquitin system [BR:
alat04121
]
119014836 (si:ch211-81a5.1)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119014836 (si:ch211-81a5.1)
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119014836 (si:ch211-81a5.1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119014836 (si:ch211-81a5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_19
zf-rbx1
zf-RING_5
zf-ANAPC11
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
119014836
NCBI-ProteinID:
XP_036946239
LinkDB
All DBs
Position
3:8861483..8870750
Genome browser
AA seq
354 aa
AA seq
DB search
MGCRCDVRRCALTVKMAEAAEAPQHRFFCHCCKCETNPKLPDLVCPRCDSGFIEEVSEDS
SLLQDSSTSSSSEESDSLFSELWQLLFMERSALLSHPPSSESDPDDGEQVSAGQSRPSPV
SPGAAEAREPESPSQPGEERSPRSEQRPAVEGCVGMDGAAVLGRPVRRQRKPRCCTGCTV
STFRSSIRLLRFLISSGVCLTPPPSFFSLLSSFRPSLRSSMLQLYANPGDYAWGQGGLDT
VITELLGQLESTGPPPAERDMISSLPRVCISEEQTDCRLECPVCREEYSLGESVRKLPCL
HYFHSDCIVPWLELHDTCPVCRKSLDGVDNSLPPTAQPPEARSVRMEQQERQAS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggctgccgctgcgacgtcaggcgctgcgctctcaccgtgaagatggcggaggctgcg
gaggcaccacaacaccggtttttctgtcactgctgtaaatgtgaaactaaccctaaactc
ccggacttggtctgtcccaggtgtgactccggtttcattgaggaggtgtcagaagactcc
agtcttctgcaggacagcagcacatcatcgtccagtgaggagtcggactctttgttctcg
gagctatggcagctgctgtttatggagcgctctgctctgctgtcgcatccgccgtcctcg
gagtccgacccagacgacggcgagcaggtatctgcgggtcagagccgtccgtctccggtg
tcgccaggcgccgccgaggcccgagaaccagagtctccgtcgcagcctggagaggagagg
tcccccaggtctgagcaaagacctgcagtggaagggtgtgtgggaatggatggtgcagca
gttcttggccggcctgttcgccggcaacggaaaccacggtgctgcaccggctgcactgta
agcactttccgatcttcgattcgcctccttcgctttctgatttcctctggcgtttgtctg
acgccccctccctctttcttctctctcctgtcctctttccgtccgtcgctcagatccagc
atgctacagctgtacgcaaaccctggagattacgcgtggggtcagggaggcctggacact
gtcataacagagctgttaggacagctggagagcacgggtcctccccccgcagagagggac
atgatctcatccctgccaagagtttgcatctctgaggaacagacagactgcagactggag
tgtccagtttgtagggaggagtattcattaggggaatctgtcaggaagctaccctgcctc
cattacttccacagtgactgtatagtgccttggctggagctgcacgatacctgcccggtg
tgcagaaaaagccttgacggtgtggacaacagcctcccgcccacagcacagcccccagaa
gcccgctccgtcaggatggagcaacaggagaggcaggcgagctga
DBGET
integrated database retrieval system
