Acanthopagrus latus (yellowfin seabream): 119015002
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Entry
119015002 CDS
T08233
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140
Autophagy - animal
alat04148
Efferocytosis
alat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119015002 (vps16)
04148 Efferocytosis
119015002 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119015002 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119015002 (vps16)
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119015002 (vps16)
Hops complex
119015002 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
119015002
NCBI-ProteinID:
XP_036946399
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All DBs
Position
24:15970161..15978852
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AA seq
834 aa
AA seq
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MAFITANWNPLGEAFYRKTELYEMSWNLREGLRDCLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVSITSFPWKSGPVVQLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPTCWVVL
TQDRQTKVLLSNGPELFILDNTSCTAVCPPGFSPQAGSIVHMSVSFSYKYLALFTDTGYL
WTGSSQLQDKLSEVDTKKSMPPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCNDTIQFPI
EDHCVLVGELDGVRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDTNTQKSLLRAASFGKCFLTDFSPDLFVMTCR
ELRVLNAVRESSVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQDTLKDLYNQDDDHQELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FAAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATIEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFAKSKKSPIGYLAFVEVCMKSHNKYEAKKYVSKVTPEQK
VKAHLAVSDLEGAADAAIERKNESEIGVVLSRCSASDRLLIDRLNRARALTAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcaccgccaactggaacccgctgggagaagccttttatcggaaaacagaa
ctgtatgagatgagttggaacttgagggaaggactcagagactgtttggtggctgcagct
ccttatggaggacctatagctctcctcagagaacctcacagacgttctcccagttctcgt
ccccagttggagatttattctgcatctggagtctccataaccagcttcccatggaagagt
ggtcctgtggtccagttgggttggacagtcagtgatgagctgttgtgtattcaggaggac
ggctcggttctgatctatgatctgtttggatccttcaagagacactttagtatgggacag
gaagtggttcagagtcaggtgttggaagccaaagtgttccactctccttatggaacaggc
gtcgccatagtaactggctcctcccgattcaccttggcaacaaacatcgatgacctgaag
ctgcggagattacctgaagtcccaggtttgcaggggaagcctacctgttgggtcgtcctc
actcaggacagacagactaaagtcctcctgtccaatggacctgaactcttcatcctggac
aacacgtcctgcactgctgtgtgtcctcctggtttcagtcctcaggctggcagtattgtc
cacatgtcggtgtctttcagctataagtacctggctcttttcactgacactggatacctg
tggacaggctcctcccaactgcaggacaaactgagcgaagtcgacactaaaaagtcgatg
cctcccaagcagatggtctggtgtcgaagaccgaagagtcagcaaccatctgtggtgttg
atgtgggacagactgctcatggtggccggagtctgtaacgacaccatccagttcccaata
gaggatcactgtgttctggttggagagctggatggagttcgaatcatcagctcgaccaat
caggagctgcttcaggaggttcctctggtctgtcaggacatcttcaagatcgcttccatg
gctcccggagctctgctgcttgaggcccacagggagtatgagaagtccagtcagaaggcc
gatgagtacctgagggagatcaaggagcaaagcatgctgggagaggcggttagacagtgt
gtcgaggcggctggacacgaatatgacaccaacacccagaagtccctgctgagggcggcc
tcgttcgggaaatgcttcctgacagacttcagtcccgacctgtttgtgatgacctgcaga
gaactacgagtgctgaatgccgtcagagagagcagcgtagggctgccgctcacacacaca
caatttaaacagatgactctgcaggtgctgatcgacaggttggtgtatcgacagttttat
ccattagcgatagaaatctgtcgttacctgaagattccagattatcagggagtcagcaga
gtcctcaaacactgggcatcatgcaaggtgcagcagaaggacctatcagatgaggctata
gcccgagctgtgtgtgtgaaggtgggagactcacctggtgtttcttactcacacattgca
gctaaagcttatgagtgtgggcgtactgagctcgccattaagctgttggatttcgaggct
cggtctggagaacaggttcctctgctcctgaagatgaagaggagccagttggctctcagt
aaagctgtggagagtggagacactgacctggtttacactgtggtgacttacctgaagaat
gagatgaaccgaggagatttcttcatgacgctgaggaaccaaccggttgcacttagcctg
tacagacagttctgtaaactgcaggaacaggacacactgaaagatctctataaccaggac
gatgatcaccaggagctcgccaactactacgttactgccagttacagagaaaagaggtta
gaaagccgtctgtctctcctgcagagtgctgttgatgaatacaacaaggcgaagaatgag
tttgctgcaaaggccacagaggatgagatgcgtcttctacgattccaacgaaaactggat
gatgagaagggggcggggttactgggactatctctgcaggctacaattgaggctctgctg
gcgttgggactccacaaacaagcagaacaactttacagagacttcagagttcctgataaa
aggtactggtggttgaagctgaagtctctggcagagaaagaggagtgggaggagttggaa
aagtttgcaaagagtaaaaaatctcctattggctacctggcatttgttgaagtttgcatg
aagagtcacaacaagtacgaagccaagaagtatgtttccaaggtaacacctgagcagaag
gtcaaagctcacctggccgtcagtgaccttgagggggcggcagatgctgccatcgaacgc
aagaacgaatcagagattggggtggtcctctccagatgctccgcctctgatcgcctgttg
attgacaggttgaaccgagccagagcattaactgccaaaaagtga
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