Acanthopagrus latus (yellowfin seabream): 119015057
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Entry
119015057 CDS
T08233
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119015057
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119015057
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
119015057
NCBI-ProteinID:
XP_036946555
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All DBs
Position
24:complement(3399590..3447421)
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AA seq
961 aa
AA seq
DB search
MGQKDHVEAGAGHILDLGLDLEYLHVAGADCQAGAADGPPAMEEQGESSSTSSTANSPPP
TVVEDNAGSDAEGEPGSSSSATLAAGSDPDGAEGALTHSKSTHQPLCRTQCVDLGTEGPP
EPPSEPTLELEHDTPPQSSPSSPCKHPPESSSNQEPVSEAGGKEYQAKLEFALKLGYSEE
TVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGCSDLLDGQ
RSDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITVF
VPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDG
IIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVM
PEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRAIAKTCVTTKNQGDTGLVKS
HSVPAGSIEAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRAESQKSSLCSSSSSSRTMSP
APGGGPPSSLSLPQDQQSRTATPHALPAPSHDLYPHCESPDLSYYSVTRAYSGLSLSSRR
SPDCRFPNDTDLRLGSMGSAGSECGSESSVSCGSSCDSYGERSCPACPPDTLLEDSVHFA
NPHSRLYPHHALSNHELCGLHPADYTNIQHSHSSNAGVHSYHLSVARGQGCAHDQPPPEA
PPKRPLYPLPPHLQHQPLAARSSCPGDYHSLPQSNPHPPGSPLGRCLAPTRAESVSDSHL
YEHLSTSHHHHRAKALPSWDTYYRQPPLPPSRYEPSAYQSLPDTRQSSWHAPPWAQDGYS
QHHSSHPALHPSPTHYLNHPPPPAHPPHPPHPSGTPLPPYPPHSAHLSVPSHAPPPSSYM
PQHPESPAHSHYGDVREKVYVNLCNIFPSELVSRVMARSPHVTDPQQLAAAILAEKAQTG
Y
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggagcaggccacatcctcgacctggggctggat
ttggagtatctccacgtagcgggggctgactgtcaggctggcgccgctgacgggccccct
gctatggaggagcagggggagagctccagcaccagcagcacagccaattcccctccgccg
accgtggtggaggataacgctgggtctgacgcggagggcgagcccggatcctcttccagt
gccacccttgccgccggctctgacccagacggagcagagggagcgttgactcacagcaag
agcacccaccagccgctttgtcggacccagtgtgtggacttaggcactgagggtccccct
gagcccccatctgaacccacactagagcttgaacatgacacccctccccagtcctcaccc
agttccccatgcaagcacccacctgaatcttcatccaatcaagaaccggtatctgaggct
ggtgggaaggagtaccaggctaagctggagtttgccctgaagctggggtactcagaagag
acagtgcgactggtgctgtccaaactcggccctgacaccctaatcaatgatatactggga
gagctggtcaaactgggaaccaagtcagacagcgagcagccagctggatcattagcctct
acctcatcgtcatcatcctcctcttcctcttgcggctgttcggatttactggatggccag
aggtcggactcaccctgtccttcagactctctgtgtgaccaggacaacctgcggccaatt
gtggtggatggcagtaacgtagccatgagccatggcaacaaggaagtgttttcctgccag
ggcatccagctggccgtcgattggttcctggagcgtggccatcatgacatcacagtgttt
gtgcctgcgtggaggaaagagcagtcccgccccgatgccccaataacagatcaggaaatc
ctgcgtcgccttgagaaggaaaagatcctggtcttcactccttcgcggcgcgtccaaggc
cgacgcgtggtttgctatgacgaccgcttcatcgtcaagctggcctatgagtcagacggc
atcatcgtctccaacgataactacagagacctggctaatgagaagcccgagtggaagaag
ttcatcgatgaacggcttctcatgtattcctttgtaaatgacaaattcatgcccccggat
gaccctctcggtcgtcatggccccagcttggacaacttcctgaggaaaagacctgtcatg
cctgaacagaaaaaacagccgtgcccatatggaaagaagtgcacttacggccacaagtgt
aagtactaccaccccgaaagaggtgctcagcctcagcgtgccgtggctgatgagctgcgt
gccatcgccaagacctgtgtcaccacaaaaaaccagggggacactgggctagtgaagagc
cacagcgtgccagctggcagcatagaggcaaagaaaggcgctccgaaaaggcagtcggac
ccgagcatccgagcactgtcatacagcgatgcggaggagaagttgctggcgaaagggaga
gccgaaagccagaagagcagtctgtgtagcagcagcagtagcagcagaaccatgtcccca
gccccaggaggcggcccgccatccagtcttagccttcctcaggaccaacagtccagaaca
gcgactcctcatgctctaccagcccccagccatgacctttaccctcactgtgagtctcca
gacttgagctactactcggtgacgcgtgcctactcgggcctgagcctctcctccagaagg
agcccagactgtcgcttccccaatgacactgacctgcggctgggctctatgggctcagcg
ggctcggaatgtggcagtgaaagcagcgtgagttgcggtagcagctgtgactcgtatggt
gagaggtcatgtcctgcgtgccccccagacactttgttggaagacagcgtccattttgct
aatccccacagccggctgtatccccatcacgccttgtcaaaccatgaactatgtggcctt
catcctgccgattacacgaatatccaacacagccactcatctaatgccggagtacacagc
taccacctgagtgtggcgcgtgggcagggttgtgcccacgatcagcctccaccagaagca
ccccccaaacgccctctctaccctttgccccctcatctccagcaccagccactggccgca
cgctccagctgcccgggcgactaccactctctgccccagtccaacccccaccctcccggc
tcccctctcggccgctgcctggccccgacgcgagcagagagtgtgtcagactcacacctg
tatgaacacctctctacgtcgcaccaccaccacagggctaaagctctgcccagctgggac
acatactacagacagcctccgttaccgccgtccaggtatgagccgtcggcctatcagagc
ctgccagacacacggcagtcttcctggcacgctcccccctgggcacaagacggctacagc
cagcaccactcctctcacccagccctccacccgtccccgacacattacttaaaccacccg
ccacctccagcccaccctcctcacccgcctcatccatccggcactcctctcccgccgtac
ccgcctcatagcgctcacctttcagtgccctcccacgctcctcccccctcatcctacatg
ccgcagcaccccgaatctccagcacacagccactatggggacgttagggagaaagtgtac
gtcaacctgtgcaacatcttcccctcggagttggtgagccgggtgatggccaggagcccc
cacgtcacagacccccagcagctggcagccgccatccttgcagagaaagcccaaacaggc
tactga
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