Acanthopagrus latus (yellowfin seabream): 119015095
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Entry
119015095 CDS
T08233
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119015095
03041 Spliceosome [BR:
alat03041
]
119015095
03036 Chromosome and associated proteins [BR:
alat03036
]
119015095
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119015095
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119015095
mRNA cycle factors
Common to processing body (P body) and stress granule
119015095
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119015095
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119015095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
119015095
NCBI-ProteinID:
XP_036946636
LinkDB
All DBs
Position
24:2579964..2596239
Genome browser
AA seq
739 aa
AA seq
DB search
MSHVAVENVHGLEQQLAVLDLSAADGQGGGTNRRYIPPHLRNKDASKTGNAFAAGRQGGY
TIAPAANYGWDGGRNNFVNGYHDNRMTGGNTFNRGPPRMERGRGGVGGGYRGNRGGAFNP
MNQAQPMPFAAYDNKDAGGWNTAKDAYSNFGNNRGKSAFFNDRGNANRGRFDHGGFGGGG
GGGSSRWVEESRDEGDWSKPTPRNERLEHELFSASNTGINFEKYDDIPVEATGQNCPHHI
ENFQDVDMGEIIMGNIGLSRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPIL
SQIYCEGPGEALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSRV
RPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMIERGKIGLDYCNYLVLDEADRMLDM
GFEPQIRRIVEQDTMPHKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENI
TQKVVWVEESDKRSFLLDLLSATVIPSEVQDNTGDNIEKPGKDSLTLVFVETKKGADALE
DFLYREGYACTSIHGDRSQRDREEALSQFRSGKCPILVATAVAARGLDISNVKHVINFDL
PSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEH
QHKSSNRGRSKRFSGGFGARDYRQTAAGGNAGGFGGRGGRNQAGHGGNRGFGGGGFGNFY
TSDGYGGNYSHSQVDWWGN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgtccacggtctagagcagcagctcgctgtactagac
ttgagtgcagcagacggacaaggtggaggcacaaacaggcgatacattcctccacattta
cggaacaaagacgcttccaaaactggaaatgccttcgctgctggtcgacagggtggctac
accattgcacctgcagccaactatggttgggatggcgggcgcaacaactttgtcaatggc
taccatgacaaccgcatgactggtggcaacacgtttaaccgtggaccacctcgcatggag
cggggccggggtggcgtcggaggaggttaccgtggcaacagaggtggggcttttaacccc
atgaaccaagcacagccaatgccgtttgctgcctatgataataaagacgctggcggctgg
aacactgccaaggacgcctacagcaattttggtaacaaccgagggaagtctgcgttcttc
aatgacaggggcaatgctaacagagggaggtttgaccatggtggatttggtggtggagga
ggtggaggaagcagccgctgggtggaggagtccagagatgagggagactggtctaaacca
acaccacgtaatgaacgccttgaacatgagttgttctctgccagtaatactgggattaac
tttgagaaatatgacgacattcccgttgaggccacaggacagaactgccctcaccacatc
gagaatttccaagatgtggacatgggtgagatcatcatgggtaacattggtctgagtcgc
tacaccagaccgacccctgtccagaaatatgccatccctattgtcaagtcaaagcgagac
ctcatggcctgcgcacaaacaggttctgggaagactgcagccttcctgctgccgatcctt
agccagatctattgtgaaggaccaggagaagctctgaatgcagctaaagcatctgggcag
gaaaatggaaagtatgggcgtcgtaagcagtaccccatctcactggtgttggctccaacc
agagaactggcattacagatatatgatgaggccaggaagttttcctaccgttccagagtg
cgtccctgtgttgtgtatggaggagcagacattggccagcagattagagatctggaaaga
ggctgccacctgctggtggccacaccagggagattggtggacatgatagagaggggcaag
attggactggactactgcaactacctggtcctggatgaggcagatcgtatgttggacatg
ggatttgaaccacagattcgacgcattgtggaacaggacactatgccccacaaaggcatc
cggcaaaccatgatgttcagtgcaacctttcctaaagagatccagatccttgccagggat
ttcctggaggagtacatcttcctggcggtcggaagagttggttccacctcagagaacatc
actcagaaagtagtgtgggtggaggagagcgataaaagatctttcctcctggacctgctc
agtgctacagtcatccccagtgaggttcaggacaatactggagacaacatagagaaacct
ggtaaggactcactgaccctggtttttgtggagacaaagaaaggtgctgatgccttggag
gacttcctgtatcgggaaggctatgcctgtaccagtatccatggcgaccgctcccagaga
gaccgagaggaggccctcagccagttcagatcaggaaaatgccccattctggtggccaca
gcggtagcagctcgtggactggacatctccaatgtgaaacatgttattaattttgacctg
cccagtgacatcgaagagtatgtccaccgtattggacgtacaggacgagtcggaaaccta
ggacttgcaacatcgttcttcaatgacaaaaatggtaacatcactaaagacctgctggac
atcctggtggaggccaaacaggaagttccatcatggcttgagagcctggcctatgaacac
cagcataagagcagcaacagaggacgctctaagaggttctccggtggttttggagcacgt
gattatcgccagacggctgcaggaggcaatgctggagggtttggcggacgtggcggtcgc
aaccaggcaggacacggaggaaaccgaggctttggaggaggtggctttggcaacttctac
accagtgacggctatggaggcaactattcgcattctcaagttgactggtggggcaactag
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