Acanthopagrus latus (yellowfin seabream): 119015116
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Entry
119015116 CDS
T08233
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119015116
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119015116
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
NOD2_WH
SPRY
LRR_6
PRY
LRR_1
AFG1_ATPase
LRR_4
LRR_8
NPHP3_N
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
119015116
NCBI-ProteinID:
XP_036946685
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All DBs
Position
24:complement(15211223..15225853)
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AA seq
1110 aa
AA seq
DB search
MNQCEDREEGGPPSKTTGPGPGPGPGPGPGPGPEPSCVSFKSDKSNNRDINFKAQLPPAV
KRRPASTGPGPGPGPGPEPSCVSFKSDRSIDRNIDFKQEPSSDRQVDQESSEVPRGPSVQ
QHQTHLDSIFMLLEENIVTFVKNELKKVQKVLSSDYPECSESQREDEEDEEQRRSSREAF
LKITLHFLRRMKQEELADCLQSKSHSAVCQRELKSNLQKKFQCVFEGIVKAGNPTLLNQI
YTELYITEGGTAEVNDEHEVRQIETASRKPDRPETTVRQEDIFKASPGRDEPIRTVMTKG
VAGIGKTVLTQKFTLDWAEDKDNQDIQFTFPFTFRELNVLKEKKFSLVELVHHFFTETKE
ICSFEEFQVVFIFDGLDECRLPLDFHNTEILTDVRESTSVDVLLTNLIRGKLLPSARLWI
TTRPAAANQIPPGCVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMC
HIPVFCWITATVLEDVLKTRKRGELPKTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWTP
ESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDK
VFCFIHLSVQEFLAALHVHLTFINSGVNLLVEEKTADRQSTEKRLYQSAVDQALLSPNGH
LDLFLRFLLGLSPQTNQTLLRGLQTQTGSISQTNQETVEYIKKKFEETLSAERSINLFHC
LNELNDRSLLEEIQQYLSSGSLSTDKLSPAQWSALVFILLSSEEDLDVFDLKKYSASEEA
LLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSA
ELKSPHCVLETLRLSGCLITEDGCTSLASALDSNSSHLRELDLSYNHPGDSGVKQLSARL
EDPGWRLDTLRVEPAGVRWLTPGLRKYSCELTVDTNTVSRNIKLSDNNRKMTHVEEEDQS
YPDHPERFESRWTQLLCRTGLTGRCYWEVEWRGSVSISVSYRRIRRKGDSKDCVFGGNDQ
SWSLWCNYGRYSVWHNKRLTDVSSSSSSSSSGRVAVYVDCPAGTLSFYRVSSDSLIHLHT
FNTTFTQPLYPGFGLYRTSSGSSSVRLCGV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtgtgaggacagagaggagggaggccctccctctaaaaccactggacctgga
ccaggaccaggacctggacctggacctggacctggacctgagcccagctgtgtgtccttc
aagagtgacaagtcaaataatcgtgacattaattttaaagcacaactacctcctgctgta
aagaggagaccagcctctactggacctggacctggacctggacctggacctgagcccagc
tgtgtgtccttcaagagtgaccggtcaattgataggaacattgatttcaaacaagaacct
tcctcagacagacaagtcgaccaggagagctcagaggttcccagaggtccgtctgtccag
cagcatcagacacacctggactccatatttatgctgctggaggagaacattgtgactttt
gtgaagaacgagctgaagaaggtccagaaggttctgagttcagattacccagaatgctca
gagagtcagagggaggatgaggaggatgaagagcagaggaggagcagcagagaggcattt
ctgaagatcacacttcacttcctgaggagaatgaagcaggaggagctggctgactgtctg
cagagcaaaagtcattctgcagtttgtcagcgtgaactgaaatctaaccttcagaagaag
ttccagtgtgtgtttgaggggatcgttaaagcaggaaacccaacccttctgaatcagatc
tacacagagctctacatcacagagggagggactgcagaggtcaatgatgaacatgaggtc
agacagattgaaacagcatccaggaaaccagacagaccagaaacaacagtcagacaagaa
gacatctttaaagcctcacctggaagagacgaaccaatcagaacagtgatgacaaaggga
gtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagac
aaagacaaccaggacatacagttcacatttccattcactttcagagagctgaatgtgctg
aaagagaaaaagttcagcttggtggaacttgttcatcacttcttcactgaaaccaaagaa
atctgcagctttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttccacaacactgagatcctgactgatgttagagagtccacctcagtg
gatgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctcctgggtgtgttgacatggtgacagag
gtcagagggttcactgatccacagaaggaggagtacttcaggaagagattcagagacgag
gagcaggccagcagaatcatctcccacatcaagacgtcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaagaccaga
aagagaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcag
tccaaagtgaagaaggtcaagtatgatggaggagctgagacagatccacactggactcca
gagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaagga
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaag
gtgttctgcttcatccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
accttcatcaactctggtgtcaatctgctggtagaggaaaaaacagcagaccgtcaatct
acagagaaacgtctctaccagagtgctgtggaccaggccttgctaagtccaaatggacac
ctggacttgttccttcgtttcctcctgggtctttcaccgcagaccaatcagactctcctg
cgaggtctgcagacacagacaggaagtatctcacagaccaatcaggaaacagtcgagtac
atcaagaagaagtttgaggagactctgtctgcagagagaagcatcaatctgttccactgt
ctgaatgaactgaacgatcgttctctactggaggagatccaacagtacctgagttcagga
agtctctccacagataaactgtctcctgctcagtggtcagctctggtcttcatcttactg
tcatcagaagaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggct
cttttgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggctgtaac
ctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctg
agagagctggacctgagtaacaacaacctgcaggattcaggagtgaagctactttctgct
gaactgaagagtccacactgtgtccttgaaactctcaggctgtcaggctgtctgatcaca
gaggacggctgtacttctctggcctcagctctggactccaactcctcccatctgagagag
ctggacctgagctacaatcatccaggagactcaggagtgaagcagctgtcagctcgactg
gaggatccaggctggagactggacactctcagggtggagcctgctggagtccgatggttg
acaccaggtctgaggaagtattcctgtgagctcacagtcgacacaaacacagtcagcaga
aacatcaaactgtctgacaacaacaggaagatgacacatgtggaggaggaggatcagtca
tatcctgatcatccagagaggtttgagtccaggtggactcagctgctgtgtagaactggt
ctgactggtcgctgttactgggaggtcgagtggagaggaagtgtttctatatcagtgagt
tacagaagaatcagaaggaaaggagacagtaaagactgtgtgtttggagggaatgatcag
tcctggagtctgtggtgcaattatggtcgttactctgtctggcacaataagagactaaca
gacgtctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatgtggactgt
cctgctggcactctgtccttctacagagtctcctctgactcactgatccacctccacacc
ttcaacaccacattcactcaacctctttatcctggatttggactctacaggaccagttct
ggttcctcctcagtgcgtctgtgtggtgtttag
DBGET
integrated database retrieval system
