Acanthopagrus latus (yellowfin seabream): 119015199
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Entry
119015199 CDS
T08233
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119015199
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119015199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
FISNA
NACHT
LRR_1
LRR_4
NOD2_WH
PRY
SPRY
LRR_8
AFG1_ATPase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119015199
NCBI-ProteinID:
XP_036946882
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All DBs
Position
24:13805804..13822907
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AA seq
1369 aa
AA seq
DB search
MICVSSPDESVCEMSSMNQCEDREEGGPPSKTTGPGPGPGPGPGPGPEPSCVSIKSDWSN
DRDINFKEQPAPAVKRRPASTGPGPGPGPGPEPSCVSFKSDWSNDRDINFKEQPPPAVKR
VDQESSEVPRGPSVQQHQTHLDSIFMLLEENIVTFVKNELKKIQKVLSSDYPECSESQRE
DEEVLDSEDEEQRRSSREAFLKITLHFLRRMKQEELADCLQSKSHSAVCQRELKSNLQKK
FQCVLEGIAKAGNPTLLNQIYTELYITEGGTAEVNDEHEVRQIQTASRKPHRPETTVRQE
DIFKASHGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVL
KEKKFSLVELVHHFFTETKEICSFEEFQVVFIFDGLDECRLPLDFHNTEILTDVRESTSV
DVLLTNLIRGKLLPSARLWITTRPAAANQIPPGCVDMVTEVRGFTDPQKEEYFRKRFRDE
EQASRIISHIKTSRSLDILCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQ
SKVKKVKYDGGAETDPHWTPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAAS
VYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLAALHVHLTFITSGVNLLATNKQTKDRR
SAEKRLYQSAVDEALQSPNGHLDLFLRFLLGLSLQTNQTLLKGLLTRTGSCSQTNQETVE
YMKKKISENLSPERSINLFHCLNEVNDRSLVEEIQQYLSSGRLSTDKLSPAQWSALVFIL
LSSEEDLDVFDLKKYSASEEALLRLLPVVKATNTVLLSDCNLSERSCEALSSVLSSQSSS
LRELDLSNNNLQDSGLRHLSVGLESPQCRLETLRLSGCNLSERSCEALSSVLSSQSSSLR
ELDLSNNNLQDSGVKRLSAELKSPHCVLETLRLSGCLITEEGCTSLASGLDSNPSHLREL
DLSNNNLQDSGVKRLSAQLKSPHCVLETLRLSGCLITEEGCSSLVSALDSNPSHLRELDL
SNNNLQDSGVKLLSAELKSPQCVLETLRLSGCLITEEGCTSLASALDSNPSHLRELDLSN
NNLQDSGVKRISAELESPHCVLETLRLSGCLITEEGCTFLTSALDSNPSHLRELDLSYNH
PGDSGVKQLSARLEDPGWRLDTLRVEPAGVRWLTPGLRKYSCELTVDTNTVSRNIKLSDN
NRKMTSVEEDQSYPDHPERFESWCPQLLCRTGLTGRCYWEVEWRGRVYITVSYRRIRRRG
GSTDCWFGCNDQSWSLDCDDSRYSVWHNNRRTFLSSSSSSSSSSSSSSSSGRVAVYVDCP
AGTLSFYRVSSDSLIHLHTFNTTFTEPLYPGFGLYLSSSVSSSVRLCGV
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtgtttcctctccagatgaaagtgtgtgtgagatgagcagcatgaatcagtgt
gaggacagagaggagggaggccctccctctaaaaccactggacctggacctggacctgga
cctggacctggaccaggacctgagcccagctgtgtgtccatcaagagtgactggtcaaat
gatcgtgacattaattttaaagaacaaccagctcctgctgtaaagaggagaccagcctct
actggacctggacctggacctggacctggacctgagcccagctgtgtttccttcaagagt
gactggtcaaatgatcgtgacattaattttaaagaacaaccacctcctgctgtaaagaga
gtcgaccaggagagctcagaggttcccagaggtccgtctgtccagcaacatcagacacac
ctggactccatatttatgctgctggaggagaacattgtgacttttgtgaagaacgagctg
aagaagatccagaaggttctgagttcagattacccagaatgctcagagagtcagagggag
gatgaggaggtgttggacagtgaggatgaagagcagaggaggagcagcagagaggcattt
ctgaagatcacacttcacttcctgaggagaatgaagcaggaggagctggctgactgtctg
cagagcaaaagtcattctgcagtttgtcagcgtgaactcaaatctaaccttcagaagaag
ttccagtgtgtgttagaggggatcgctaaagcaggaaacccaacccttctgaatcagatc
tacacagagctctacatcacagagggagggactgcagaggtcaatgatgaacatgaggtc
agacagattcaaacagcatccaggaaaccacacagaccagaaacaacagtcaggcaagaa
gacatctttaaagcctcacatggaagagacgaaccaatcagaacagtgatgacaaaggga
gtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaagac
aaagccaaccaggacatacagttcacatttccattcactttcagagagctgaatgtgctg
aaagagaaaaagttcagcttggtggaacttgttcatcacttcttcactgaaaccaaagaa
atctgcagctttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttccacaacactgagatcctgactgatgttagagagtccacctcagtg
gatgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctcctgggtgtgttgacatggtgacagag
gtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcagagacgag
gagcaggccagcagaatcatctcccacatcaagacatcacgaagcctcgacatcttgtgc
cacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaagaccaga
gagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtggttcag
tccaaagtgaagaaggtcaagtatgatggaggagctgagacagatccacactggactcca
gagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaagga
aacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctca
gtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtaccaggacaag
gtgttctgcttcatccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
acattcatcacctctggagtcaatctgctggcaacaaacaaacaaacaaaagaccgtcga
tctgcagagaaacgtctctaccagagtgctgtggacgaggccttacagagtccaaatgga
cacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcagactctc
cttaaaggtctgctgacacggacaggaagttgctcacagaccaatcaggaaacagtcgag
tacatgaagaagaaaatcagtgagaatctgtctccagagagaagcatcaatctgttccac
tgtctgaatgaagtgaacgatcgttctctagtggaggagatccaacagtacctgagttca
ggacgtctctccacagataaactgtctcctgctcagtggtcagctctggtcttcatctta
ctgtcatcagaagaagatctggacgtgtttgacctgaagaaatactctgcttcagaagag
gctcttctgaggctgctgccagtggtcaaagccaccaacacagttctactgagtgactgt
aacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagt
ctgagagagctggacctgagtaacaacaacctgcaggattcaggattgaggcatttgtcc
gttggactggagagtccacaatgtagacttgaaactctcagactgagtggctgtaacctc
tcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgaga
gagctggacctgagcaacaacaacctgcaggattcaggagtgaagcgactgtctgctgaa
ctgaagagtccacactgtgtccttgaaactctcaggctgtcaggctgtctgatcacagag
gaaggctgtacttctctggcctcaggtctggactccaacccctcccatctgagagagctg
gacctgagtaacaacaacctgcaggattcaggagtaaagcgactttctgctcaactgaag
agtccacactgtgtccttgaaactctcaggctgtcaggctgtctgatcacagaggaaggc
tgttcttctctggtctcagctctggactccaacccctcccatctgagagagctggacctg
agtaacaacaacctgcaggattcaggagtgaagctactgtctgctgaactgaagagtcca
caatgtgtccttgaaactctcaggctgtcaggctgtctgatcacagaggaaggctgtact
tctctggcctcagctttggactccaacccctcccatctgagggagttggacctgagtaac
aacaacctgcaggattcaggagtgaagcgaatttctgctgaactggagagtccacactgt
gtccttgaaactctcaggctgtcaggctgtctgatcacagaggaaggctgtacttttctg
acctcagctctggactccaacccctcccatctgagagagctggacctgagctacaatcat
ccaggagactcaggagtgaagcagctgtctgctcgactggaggatccaggctggagactg
gacactctcagggtggagcctgctggagtccgatggttgacaccaggtctgaggaagtat
tcctgtgagctcacagtcgacacaaacacagtcagcagaaacatcaaactgtctgacaac
aacaggaagatgacaagtgtggaggaggatcagtcatatcctgatcatccagagaggttt
gagtcctggtgtcctcagctgctgtgtagaactggtctgactggtcgctgttactgggag
gtcgagtggagaggaagagtttatataacagtgagttacagaagaatccgaaggagagga
ggcagtacagactgttggtttggatgtaatgatcagtcctggagtctggactgtgatgat
agtcgttactctgtctggcacaataacagaagaacattcctctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatgtggactgtcct
gctggcactctgtccttctacagagtctcctctgactcactgatccacctccacaccttc
aacaccacattcactgaacctctttatcctggatttggactctacttgtccagttctgtt
tcctcctcagtgcgtctgtgtggtgtttag
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