Acanthopagrus latus (yellowfin seabream): 119015212
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Entry
119015212 CDS
T08233
Name
(RefSeq) protein NLRC3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119015212
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119015212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
WHD_NOD2
LRR_1
LRR_4
PRY
SPRY
LRR_8
AFG1_ATPase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119015212
NCBI-ProteinID:
XP_036946910
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All DBs
Position
24:13835466..13859833
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AA seq
1109 aa
AA seq
DB search
MLLEENIVTFVKNELKKVQKVLSSDYPECSESQREDEEVLDGEDEEQRRSSREAFLKITL
HFLRRMKQEELADCLQSKHLAAVCQRELKSNLQKKFQCVFEGIAKAGNPTLLNQIYTELY
ITEGGTAEVNDEHEVRQIETASRKPHRPETTVRQEDIFRASPGRDEPIRTVMTKGVAGIG
KTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEKKFSLVELVHHFFTETKEICRFE
EFQVVLIFDGLDECRLPLDFHNTEILTDVRESTSVDVLLTNLIRGNLLPSARLWITTRPA
VANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPVS
CWITATVLEDVLKTREGGELPKTLTEMYIHFLVVQAKVKKVKYDGGAETDPHWTPESRKM
IESLGKLAFDQLQKGNLIFYESDLTECGIDITAASVYSGVFTQIFKEERGLYQDKVFCFI
HLSVQEFLAALHVHLTFINSRVNLLATNKQTKDRRSAEKRLYQRAVDEALRSPNGHLDLF
LRFLLGLSLQTNQTLLKGLLTRTGSISQTNQKTVEYMKKKISENLSPERSINLFHCLNEL
NDRSLVEEIQQYLRSGRLSIDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRL
LPVVKASNKVLLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKRLSAELKS
PHCVLETLRLSGCLITEEGCTSLASALDSNPSHLRELDLSNNNLQDSGVKQLSAELKSPH
CVLETLRLSGCLITEEGCTSLASALDSNPSHLRELDLSNNNLQDSGVKRLSAELKSPHCV
LETLRLSGCLITEEGCTSLASALDSNPSHLRELDLSYNHPGDSGVKRLSARLEDPGWRLD
TLRVEPAGVRWLTPGLRKYSCELTVDTNTVSKYIKLSDNNRKMTRVKEDQSYPDHPERFE
SSYPQLLCRTGLTGRCYWEVEWRGRVSISVSYRRIRRKGDSEDCLFGCNDHSWSLWCFAD
DCYSVWHNNRRTLLSSSSSSSSSSSSSSSSSGRVAVYVNCPAGTLSFYRVSSDSLIHLHT
FNTTFTQPLYPGFGLYWSSSGSSVSLCGV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaggagaacattgtgacttttgtgaagaacgagctgaagaaggtccagaag
gttctgagttcagattacccagaatgctcagagagtcagagggaggatgaggaggtgttg
gacggtgaggatgaagagcagaggaggagcagcagagaggcatttctgaagatcacactt
cacttcctgaggagaatgaagcaggaggagctggctgactgtctgcagagcaaacatctt
gctgcagtttgtcagcgtgaacttaaatctaaccttcagaagaagttccagtgtgtgttt
gaggggatcgctaaagcaggaaacccaacccttctgaatcagatctacacagagctctac
atcacagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccacacagaccagaaacaacagtcagacaagaagacatctttagagcc
tcacctggacgagatgaaccaatcagaacagtgatgacaaagggagtggctggcatcggg
aaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggac
atacagttcacatttccattcactttcagagagctgaatgtgctgaaagagaaaaagttc
agcttggtggaacttgttcatcacttcttcactgaaaccaaagaaatctgcaggtttgaa
gagttccaggttgtgttaatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacactgagatcctgactgatgttagagagtccacctcagtggatgtgctgctgaca
aacctcatcaggggaaacctgcttccctctgctcgcctctggataaccacacgacctgca
gtagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcact
gacccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggccagcaga
atcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtctcc
tgctggatcactgctacagttctggaggatgtgttgaagaccagagagggaggagagctg
cccaagaccctgactgagatgtacatccacttcctggtggttcaggccaaagtcaagaag
gtcaagtatgatggaggagctgagacagatccacactggactccagagagcaggaagatg
attgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctat
gaatcagacctgacagagtgtggcatcgatatcacagcagcctcagtgtactcaggagtg
ttcacacagatctttaaagaggagagaggactgtaccaggacaaggtgttctgcttcatc
catctgagtgttcaagagtttctggctgctcttcatgtccatctgacgttcatcaactct
agagtcaatctgctggcaacaaacaaacaaacaaaagaccgtcgatctgcagagaaacgt
ctctaccagcgtgctgtggacgaggccttacggagtccaaatggacacctggacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagactctccttaaaggtctgctg
acacggacaggaagtatctcacagacaaatcagaaaacagtcgagtacatgaagaagaag
atcagtgagaatctgtctccagagagaagcatcaatctgttccactgtctgaatgaactg
aacgatcgttctctagtggaggagatccaacagtacctgagatcaggacgtctctccata
gataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaa
gatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctg
ctgccagtggtcaaagcctccaacaaagttctgctgagtggctgtaacctctcagagaga
agctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggac
ctgagtaacaacaacctgcaggattcaggagtgaagcggctttctgctgaactgaagagt
ccacactgtgtccttgaaactctcaggctgtcaggctgtctgatcacagaggaaggctgt
acttctctggcctcagctctggactccaacccctcccatctgagagagctggacctgagt
aacaacaacctgcaggattcaggagtgaagcagctttctgctgaactgaagagtccacac
tgtgtccttgaaactctcaggctgtcaggctgtctgatcacagaggaaggctgtacttct
ctggcctcagctctggactccaacccctcccatctgagagagctggacctgagtaacaac
aacctgcaggattcaggagtgaagcgactgtctgctgaactgaagagtccacactgtgtc
cttgaaactctcaggctgtcaggctgtctgatcacagaggaaggctgtacttctctggcc
tcagctctggactccaacccctcccatctgagagagctggacctgagctacaatcatcca
ggagactcaggagtgaagcggctgtctgctcgactggaggatccaggctggagactggac
actctcagggtggagcctgctggagtccgatggttgacaccaggtctgaggaagtattcc
tgtgagctcacagtcgacacaaacacagtcagcaaatacatcaaactgtctgacaacaac
aggaagatgacacgtgtgaaggaggatcagtcatatcctgatcatccagagaggtttgag
tcctcttaccctcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtc
gagtggagaggaagagtttctatatcagtgagttacagaagaatcagaaggaaaggagac
agtgaagactgtttgtttggatgtaatgatcactcctggagtctgtggtgctttgctgat
gattgttactctgtctggcacaataacagaaggacactcctctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctcctctggtagagtagcagtgtatgtgaactgt
cctgctggcactctgtccttctacagagtctcctctgactcactgatccacctccacacc
ttcaacaccacattcactcaacctctttatcctggatttggactctactggtccagttct
ggttcctcagtgagtctgtgtggtgtttag
DBGET
integrated database retrieval system
