Acanthopagrus latus (yellowfin seabream): 119015405
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Entry
119015405 CDS
T08233
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119015405
Pattern recognition receptors [BR:
alat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119015405
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
LRR_8
zf-Paramyx-P
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
119015405
NCBI-ProteinID:
XP_036947256
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All DBs
Position
24:complement(11369111..11398513)
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AA seq
1138 aa
AA seq
DB search
MSSMNQCEDREEGGPPSKTTGPEPGPGPGPGPGPEPSCVSFKSDRSIGRFIDFKGQPAPA
VKRVDQESSEVPRGPSVQQHQTHLDSIFMLLEENIVTFVKNELKKVHKVLSSDYPECLEN
QREDEEVLDGEDEEQRRSSREAFLKITLHFLRRMKQEELADRLQSKHVAAVCQRKLKSDL
QKKFQCVFEGIAKAGNPTLLNQIYTELYITEGGTAEVNDEHEVRQIETASRKPHRPETTI
RQEDIFKASPGRDEPIRRVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFREL
NVLKEKKFSLVELVHHFFTETKEICSFEEFQVVFIFDGLDECRLPLDFHNTEILTDVRES
TSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPGCVDMVTEVRGFTDPQKEEYFRKRF
RDEEQASRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKTREGGELPKTLTEMYIHFL
VVQTKVKKVKYDGGAETDPHWTPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIR
AASVYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLAALHVHLTFINSRANLPVEEKQST
SWWSKLYRDKPTHPINSQEYEARKNDVALTQHLQSFVDEALQSPNGHLDLFLRFLLGLSL
QTNQTLLKGLQTQTGSSSQTNQKTVQYIKEKISENLSPERSINLFHCLNELNDGSLVEEI
QQYLRSGRLSTDKLSPAQWSALVFILLSSEEDLDVFDLKKYSASEEALLRLLPVVKASNK
AXCKCGEVSSECSKCAVIDPNRNNXSCSAHYSLSRLSGCNLSERSCEALSSVLSSQSSSL
RELDLSNNNLQDSGVKLLSAELKSPHCVLETLRLSGCLITEEGCTSLVSALDSNPSHLRE
LDLSYNHPGDSGVKQLSARLEDPGWRLDTLRVEPAGVRCLTPGPWRYSCELTVDTNTVDR
YVKLSDNNRKMTRVKDNQSYPDHPERFECYWPQLLCRTGLTGRCYWEVEWRGRVSISVSY
RRIRRRGVSEDCEFGWNDQSWSLWCSDDGCYYVLHNNRETVLSSSSSSSSSSSSSSSSSS
SGRVAVYVNCPAGTLSFYRVSSDSLIHLHTFNTTFTEPLYPGFGFFWSSPGSVRLCGV
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatgaatcagtgtgaggacagagaggagggaggccctccctctaaaaccact
ggacctgaacctggacctggacctggacctggacctggacctgagcccagctgtgtgtcc
ttcaagagtgaccggtcaatcggtcgtttcattgattttaaaggacaaccagctcctgct
gtaaagagagtcgaccaggagagctcagaggttcccagaggtccgtctgtccagcagcat
cagacacacctggactccatatttatgctgctggaggagaacattgtgacttttgtgaag
aacgagctgaagaaggtccacaaggttctgagttcagattacccagaatgcttagagaat
cagagggaggatgaggaggtgttggatggtgaggatgaagagcagaggaggagcagcaga
gaggcatttctgaagatcacacttcacttcctgaggagaatgaagcaggaggagctggct
gaccgtctgcagagcaaacatgttgctgcagtttgtcagcgtaaacttaaatctgacctt
cagaagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaacccttctg
aatcagatctacacagagctctacatcacagagggagggactgcagaggtcaatgatgaa
catgaggtcagacagattgaaacagcatccaggaaaccacacagaccagaaacaacaatc
agacaggaagacatctttaaagcctcacctggaagagacgaaccaatcagaagagtgatg
acaaagggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgg
gctgaagacaaagccaaccaggacatacagttcacatttccattcactttcagagagctg
aatgtgctgaaagagaaaaagttcagcttggttgaacttgttcatcacttcttcactgaa
accaaagaaatctgcagctttgaagagttccaggttgttttcatctttgacggtctggat
gagtgtcgacttcctctggacttccacaacactgagatcctgactgatgttagagagtcc
acctcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgc
ctctggataaccacacgacctgcagcagccaatcagatccctcctgggtgtgttgacatg
gtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattc
agagatgaggagcaggccagcagaatcatctcccacatcaagacatcacgaagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgttg
aagaccagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctg
gtggttcagaccaaagtgaagaaggtcaagtatgatggaggagctgagacagatccacac
tggactccagagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctg
cagaaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcaga
gcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggactgtac
caggacaaggtgttctgcttcatccatctgagtgttcaggagtttctggctgctcttcat
gtccatctgacgttcatcaactctagagcaaatttgccggtagaagaaaagcagtcaaca
tcctggtggtctaaactatacagagacaaaccaacacatcccatcaactcccaggagtat
gaagcaagaaaaaacgatgttgcactgacacagcacctccagagttttgtagacgaggcc
ttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactg
cagaccaatcagactctcctaaaaggtctgcagacacagacaggaagtagctcacagacc
aatcagaaaacagtccagtacatcaaggagaagatcagtgagaatctgtctccagagaga
agcatcaatctgttccactgtctgaatgaactgaacgatggttctctagtggaggagatc
caacagtacctgagatcaggacgtctctccacagataaactgtctcctgctcagtggtca
gctctggtcttcatcttactgtcatcagaagaagatctggatgtgtttgacctgaagaaa
tactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaa
gctnnctgtaagtgtggagaagtttcttcagaatgcagtaaatgtgctgttattgaccca
aatagaaataatntatcttgttctgctcattattctttatccagactgagtggctgtaac
ctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctg
agagagctggacctgagtaacaacaacctgcaggattcaggagtgaagctactttctgct
gaactgaagagtccacactgtgtccttgaaactctcaggctgtcaggctgtctgatcaca
gaggaaggctgtacttctctggtctcagctctggactccaacccctcccatctgagagag
ctggacctgagctacaatcatccaggagactcaggagtgaagcagctttctgctcgactg
gaggatccaggctggagactggacactctcagggtggagcctgctggagtccgatgtttg
acaccaggtccgtggagatattcctgtgagctcacagtcgacacaaacacagtcgacaga
tacgtcaaactgtctgacaacaacaggaagatgacacgtgtgaaggacaatcagtcatat
cctgatcatccagagaggtttgagtgctactggcctcagctgctgtgtagaactggtctg
actggtcgctgttactgggaggtcgagtggagaggaagagtttctatatcagtgagttac
agaagaatcagaaggagaggagtcagtgaagactgtgagtttggatggaatgatcagtcc
tggagtctgtggtgctctgatgatggttgttactatgtcttgcacaataacagagaaaca
gtcctgtcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcc
tctggtagagtagcagtgtatgtgaactgtcctgctggcactctgtccttctacagagtc
tcctctgactcactgatccacctccacaccttcaacaccacattcactgaacctctttat
cctggatttgggttcttctggtccagtcccggttcagtgcgtctgtgtggtgtttag
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integrated database retrieval system
