Acanthopagrus latus (yellowfin seabream): 119015471
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Entry
119015471 CDS
T08233
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04080
Neuroactive ligand-receptor interaction
alat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119015471
04082 Neuroactive ligand signaling
119015471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119015471
Ion channels [BR:
alat04040
]
Ligand-gated channels
GABA-A
119015471
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119015471
NCBI-ProteinID:
XP_036947357
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Position
24:6438276..6622403
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AA seq
898 aa
AA seq
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MVALHSAPNNKVGRFSVMARLILSLLLLCECQNSLCQTSEAQKEAAANDNSTVFTRILDG
LLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPM
VMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLTISAECPM
QLEDFPMDAHACPLKFGSYAYPVSEVVYTWTTGAAKSVVVAEDGSRLNQYHLVGQTAGTE
DIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVT
TVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKK
ALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRASETKIPDP
KKTYNSVSKIDKVSRIVFPVLFGTFNLVYWATYLNREPVVKGVVTSTSQLEYSDYEDHHD
GHVSQMLVPRSHQEDATLILNNLLKEYDKTLRPDIGVKPTVIDVGIYVNSIGPVSSIDME
YQIDIIFAQTWVDTRLRYNSSSSMPTLTLNSNMVGLIWLPDTIFRNSKNADSHWITTPNQ
LLRIRDNGTILYTLRMTINAECQLQLHNFPMDEHSCPLVFSSYGYPRDEIIYKWAYNSVA
TSDQKYWRLYQFDFMGLRNTTDVLTTTAGDYVVMTVYFDLSRRMGYFTIQTYIPCILTVV
LSWVSFWIKSDATPARTALGITTVLTMTTLSTVARNSLPRVSYVTAMDLFVTVCFLFVFA
AMIEYAMLNYYSYSVRRPPPKTRRMTYSSFNMAHTPRPMMPMGNSLFWQDYEDNCMYECL
DGKDCTSFFCCYEECKEGGWKKGRIHVNIRELDSYSRVFFPTSFLLFNIVYWVSYLYL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtggctctgcattcagctcccaacaacaaagtgggcagattttcagtcatggcaagg
ctcatcctttccctcctgctcctgtgcgaatgccaaaatagtctctgccagacctccgag
gctcagaaggaggcggccgccaatgacaacagcacagttttcaccaggatcctggatggg
ctcctcgacggatacgacaacaggctccggcctgggctcggagagaatgtcacagagatc
aagacgaatattttcgtcaccagcttcggcccagtgtctgacacagagatggagtacacc
atagatgtgttcttccgccagagctggaaggacgagcgcctgtgcttcaaagggcccatg
gtgatgctgccattaaacaacctgctcgccagcaacatctggacccctgataccttcttc
cttaatggcaagaagtctatcgctcacaacatgaccacgcccaacaagctgctaaggctg
caggatgacggcactttgctttacacaatgagactgaccatatcagcagaatgccccatg
cagctggaggatttccccatggatgcacacgcctgccccctcaagttcggcagctatgca
tatccagtgtccgaggtggtctacacttggactacgggggcagcaaagtctgtggtggtg
gcagaggacggctccagactgaaccagtaccatcttgtcgggcaaaccgccggcacagag
gacatacacacaagcagaggacagtatacagtgatgatggcccacttctacctgaagagg
aagattggatattttgtcattcagacgtatatgccctgcttcatgactgtaatcctgtcc
caggtgtcgttttggctaaacagagaatcagttcctgcaaggactgtctttggggtgaca
accgtgctgaccatgaccaccctcagcatcagcgccaggaactcgctccctaaagtggcc
tacgccacagccatggactggttcattgctgtctgttacgctttcgtgttctctgccctc
atcgagtttgccacagtgaactacttcaccaagaggagctgggcctgggatggcaagaag
gcgctggaggcacagcacccaaagaaacgagaccccatggtgctgtcgaaaaagccaaac
aacgtttgctcagcgggcgtcaactacacccccaacctcactaaggacgtgtccatctcc
accatctccaacacaacgtcggtgcagctccgggcctccgagaccaagatcccggaccca
aagaagacctacaacagcgtcagcaagatcgacaaggtgtcgcggatagtgtttcccgtc
ctctttggaaccttcaacctcgtctactgggctacgtaccttaacagagaaccggtggta
aaaggagtggtcacctcaacttctcaactggaatatagcgactatgaagaccaccacgat
ggccacgtcagtcagatgctggtgcccaggtcgcaccaggaggacgctaccctcatactg
aacaatttgctcaaggaatacgacaagacgctgcggccggatattggagtgaaaccaact
gtcatcgatgtgggcatatatgtcaacagcatcgggcctgtgtcatccatcgatatggag
taccagatcgatattatcttcgctcagacctgggtggacacccgtctgcggtataacagc
agcagcagcatgccgactctaaccctcaacagcaatatggttggtctgatctggctgccc
gacaccatctttaggaattccaagaacgccgactctcactggatcacgacgcccaatcag
ctgctccggatcagggacaatgggacgatactttacacactgaggatgaccatcaatgca
gaatgccagctgcagctccataatttcccaatggacgaacactcctgtcctctcgtcttc
tccagctacggctacccgcgagacgagatcatatacaagtgggcgtacaactccgtggcg
acttcagaccagaaatactggaggctttaccagtttgatttcatgggactcaggaacacc
acagacgtgctcacgacgacagcaggtgactacgtggtgatgaccgtctactttgacctc
agcagacggatgggctacttcaccatccagacctacatcccctgtatcctgaccgtggtc
ctctcctgggtctccttctggatcaagagcgacgccacacctgcccggacggccctgggc
atcaccacagtgttgaccatgaccaccctgagcacagtggccaggaactcgctacctaga
gtgtcctacgtgacggccatggacctgtttgtcaccgtctgcttcctgttcgtcttcgct
gccatgattgagtatgccatgctcaactactactcctacagtgtacgcagaccccctccc
aagacgcggagaatgacgtactcatctttcaacatggctcacacccctcggcccatgatg
cccatgggcaactccctgttctggcaggactacgaagacaactgcatgtacgagtgcctg
gacgggaaagactgcacaagcttcttctgctgctatgaggagtgtaaagaaggcggctgg
aagaaaggacgcatccacgtcaacatccgcgagctggattcctactcccgggttttcttc
cccacctccttcttgctcttcaacatagtctactgggtcagctacctctacctctag
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