Acanthopagrus latus (yellowfin seabream): 119015521
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Entry
119015521 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119015521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119015521
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119015521
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119015521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
119015521
NCBI-ProteinID:
XP_036947478
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All DBs
Position
24:5001451..5066846
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLPAPHSGPNSPGEEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDCHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLIEECDLLIDIIQQRRQ
IIGSKIKEGKAQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEINLTDTFDTFALDFGREKKLLESLDYLTAPNAPCIREELCTASYDT
IAVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QDRFTSQSSYGVVGNVFIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYLTFYDAVGSQHLHTFHVSFCQPVC
PVFNVWNKCLTILTGLPIPDHLEGMEPQD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgcttcggctgcgcccaccgcatccttatctcc
cactgcgcgaccaacgaatccgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatttccctgagtcctgagcgtggattagagggacttaagagaaacgtgacctta
cagaatattatcgatagagttcagcgggcctcatcctcagcagggctgcctctacccctg
ccgctgcctgcgccccacagcgggcccaactctcccggcgaggaagggagcaaccgattg
gcgctggtccctgtcagtgccgccatgtccagcccaggtacgcctcccgagccggtccag
tgccagttctgcgagcaggacccgccgcaggacgccgtcaagacttgcgtgacgtgcgag
gtgtcgtactgtgaggagtgcctccgggcgactcaccccaacaagaagccgttcacgggc
caccggctcatcgagcccatgccggactgccacctcagagggctccagtgcctggagcat
gacgaggagaaggtgaacatgtactgtgtcactgatgaccagctcatctgctcgctgtgc
aaactggtcggaaggcacagagaccaccaggtggcggcactgagcgaccgctatgaaaaa
ctcaagcaagccctggactccaacctgagcaacctgatcaagaggaacaacgagctggag
tcgctcatggggaagctgatccagacttgtcaacatgtggaggtgaacgcgtcccgtcag
gagggcaagctcatcgaggagtgcgatctcctgattgacatcattcagcagaggaggcag
atcattggcagcaagatcaaggaggggaaggcgcaaaggcttcggaagctcgcccaacag
atctccaactgcaagcagtgcatcgagaggtcctcagcgctcatcacgcaggccgatcag
acgctgaaagaaaccgatcacgctcgcttcctgcagactgctaagagcatcaacgagagg
gtttccatggcaactgcgtcaacccaagtgctgatccccgagataaacctaacggacacc
tttgacacatttgccctggactttgggagagagaagaagttgctggagagtctggactac
cttaccgctccgaatgctccgtgcataagggaggagttgtgcaccgcttcctacgacacc
atcgcagtccactggacgtccgatgatgagttcacggtggtttcctatgagctccagtat
gccatcttcactggacagtctaacattgccagtctgtgtaactcgctggagagctggatg
attgttcccaacatcaagcagaaccactacacggtgcacggtctgcagagtggcaccaag
tatatctttgttgtcaaggccattaaccaggcgggaagcaggagcagtgagccggggact
ctgaagactaacagccagccgttcaagctggatcccaaatctgcccacaagaagttgaag
gtgtcccacgataacctgacggtggagcgggacgaaaccacgtccaagaagggccacagc
caggatcgcttcaccagccagagcagctacggcgtggtggggaacgtcttcatcgacagc
ggtcgccactactgggaggctttaattggagggagcacatggtacgctgtgggcatcgcc
tacaagtcagctcctaagcacgagtggatcggcaagaactcggcctcctgggtgctctgc
cgctgcaacaactcttgggtggttcgtcacaacagcaaagagctggccatcgagccctcg
ccccacctgcggcgagtcggggtcctgctggactacgacgctggctacctgaccttctac
gacgcggtgggctcccagcacctgcacacatttcacgtctccttctgtcagcccgtgtgt
cccgtgttcaacgtgtggaataagtgtctgacgatcctcaccggtctacccatccccgac
catctagagggaatggaaccccaggactaa
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