Acanthopagrus latus (yellowfin seabream): 119015557
Help
Entry
119015557 CDS
T08233
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
PA14
Motif
Other DBs
NCBI-GeneID:
119015557
NCBI-ProteinID:
XP_036947541
LinkDB
All DBs
Position
3:18407869..18454821
Genome browser
AA seq
687 aa
AA seq
DB search
MMVTMLLAPVCVLLMLGARALAGGYPPIPHMKYMQPMMKGPIGPPFREGKGHYVDMPPMM
EVKGEPGPQGKPGLRGPPGPPGLPGKPGLGKPGLNGQPGPQGPAGFPGIGKPGLPGLPGK
IGPKGMPGFNGEVGPRGEPGPRGPPGQPGLPGPAGLSLNGKPGLPGIRGPPGTRGEPGIK
GGAGPPGERGIKGENGNGKPGPAGIRGPPGLKGSSGPPGLPGIGKPGLKGLPGLPGLKGD
QGLPGDRGEPGEPGAPGSQGLPGPIGIGKPGIDGLPGAPGLHGPKGEAGLRGPPGFPGTP
GYGKPGLSGPKGDKGHGGLPGLPGDKGEQGMMGPIGEPGLDGQSGPPGLQGPMGLPGKHG
MPGQKGDLGPQGPPGLPGLRGDQGPSGPFGKPGIPGEKGIPGSVGAIGKPGPKGEAGHIG
LPGNPGLTGAPGPKGETGFIGSPGPRGQSGIPGLQGPMGPMGPQGVPGLKGEPGLTGPPG
LGKFGEKGAIGPQGPPGKPGPSGLNGNPGLPGPPGPPGPPGNGQTVVAGPTDSQLEGDEV
PGDRKGPAYSQVLSASVAPAFTAILTTPFPPSAMPIKFDRTLYNGQNAYSSATGMFTAPL
SGVYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQVWVQ
MPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaccatgctgttagctcctgtctgtgtgctgctgatgctgggggcgcgagct
cttgccggaggctatccccccattcctcacatgaagtacatgcagcccatgatgaaaggg
ccgattggacccccattcagagagggcaagggacattatgttgatatgccacccatgatg
gaggtgaagggggaaccaggccctcaagggaaacctggactaagaggtccacctgggcca
ccaggacttccaggaaaacctggactgggcaagccgggtctcaatggccaaccaggccct
cagggacctgccgggtttccagggattggtaaacctggacttccaggtctcccaggaaag
attgggccaaaggggatgccagggtttaatggcgaggttggccctcgtggtgaaccaggt
ccaagaggtcctccagggcagcctggcctccctggtccagctggcctgtctctgaatggg
aaacctggtcttccaggcatcagaggcccccctgggactcggggtgagccaggaataaag
ggtggtgctggcccaccaggtgagcgtgggattaagggcgagaatggaaatggaaagcca
gggcccgcaggtataaggggtcctcctggactgaaaggcagttcaggaccacctggtctt
ccaggaattggtaaaccaggactaaaaggtttgcctggactgcctggcctgaagggtgac
caaggcctcccaggggatcgaggagaaccaggagagcctggggctccaggttcacaaggt
ctgccaggtcccattgggatagggaagcctgggatagatggacttcctggagcaccaggc
ctacatggcccaaaaggtgaggcagggctccgaggtcctcctggatttcctgggactcct
ggctatggaaaacctggtctgagtgggccaaaaggagacaagggccatggtgggttgcct
ggactcccaggggacaaaggagagcaaggaatgatgggtccaattggggaaccaggcctt
gatggacaatcaggaccaccaggacttcaaggcccaatgggactcccagggaaacatgga
atgccaggacagaagggagatctgggaccccagggccctccaggactgcctggtcttaga
ggtgaccagggccccagcggaccctttggaaaacctggcatccctggggaaaaaggaatc
cctgggtctgttggtgcaatcggaaaacctggaccaaaaggtgaggcagggcatattggc
ctacccgggaatccagggctgacaggtgccccagggcctaaaggtgaaacagggtttata
gggtctccaggccccaggggccagtcaggcattcctggtcttcagggccccatgggtcca
atggggccacagggtgtccctggcctgaaaggtgaacctggactcacagggcctccaggt
ctgggtaagtttggggagaagggagctatcggtccccagggtcctccagggaaaccaggc
ccttctggacttaatggtaaccctggtcttcctgggcctccggggccccccggtcctcca
ggaaatggccaaacagttgttgcagggccaacagattcacagttggaaggagatgaagta
ccaggggacaggaaggggcctgcttacagccaagtactctctgcctctgtggcaccagcc
tttactgccatcctcacaacacctttccctccttctgccatgccaatcaaatttgacagg
actctgtacaatgggcaaaatgcctacagctctgctactggcatgttcacggctcctctc
tctggtgtctactactttgcataccacatgcatgtgaagggaactagcttgtgggtggca
ctgtacaagaacaatgtaccagccacttacacctatgatgaatacaagaaaggctacatg
gaccaggcgtccggtagtgctgtcctagagctgaaggagggtgaccaggtatgggtccag
atgccctcggatcaggcaaatggcctctactctaccgagtacatccactcctccttctca
ggattcctgctctgtcccacataa
DBGET
integrated database retrieval system
