Acanthopagrus latus (yellowfin seabream): 119015627
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Entry
119015627 CDS
T08233
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04136
Autophagy - other
alat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119015627 (atg13)
04136 Autophagy - other
119015627 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119015627 (atg13)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119015627 (atg13)
Membrane trafficking [BR:
alat04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119015627 (atg13)
Atg1 complex
119015627 (atg13)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119015627 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119015627
NCBI-ProteinID:
XP_036947717
LinkDB
All DBs
Position
24:2274315..2282024
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AA seq
541 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKRALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCGSHRPANMGQPCNYRAPDEE
DGGPFVGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPVPLDNVQLPLAPGLVTHTL
YASRLSYQPPAAAGAAELCHPAANPNQVMHGGKEGGVVLVPAHPVHGADAHLTAEHPPIT
PGSIGDDDSLSHSGDGRRDEGRRSVSPSDPVEALNAFTRKIGAFVNKPSTQVTAASLDLP
FAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGPQDDFVMVDFRPAFSKD
DLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDML
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacctggacaagttcatcaagttcttt
gccctgaagactgtccaggtgatcgtccaggcccgtctcggagagaagatctgcactcgc
tcgtcctcgtcgcctaccggctctgattggtttaatttggccatcaaagatattcctgag
gtgactcatgaagccaagagggcactggctggccagcttccaggcattgggcgctccatg
tgtgtcgagatctccctgaagacatcggagggggactcgatggagctagagacttggtgc
ctagagatgaatgaaaagtgtgataaggacatcaaggtgtcgtatacagtctacaatcgt
ctgtctgtccttctgaagtctctgctggctattaccagagtaacacccgcctataaactg
tctagaaagcagggacacgactacgtaatattatacaggatttactttggggaagtccag
ctgagtggattaggagaaggttttcagacggtgcgtgttggcgtcgttggcactccagtc
ggcacggtcacactttcatgtgcttaccgcaccaacctggccttcatgtctaacagacag
tttgagcggtcggctcctatcatggggatcattgtggatcactttgtggatcctccctgc
ggcagccatcgccctgcaaacatgggacagccctgcaactacagagctccagatgaagag
gacggaggaccatttgtaggcgttcaggattcacaggaggtctgcaccacctccttctcc
acctcccctccctcccagtgtgtgtgtactctgagtccttcgccctcgaaactgtctaag
cccgtccccctggacaatgtgcagctcccattggctcctggacttgtcactcacactctg
tatgcttccaggttatcataccagcctccagctgcagccggggctgctgagctgtgtcat
cctgctgccaatccaaaccaggtgatgcatggtgggaaagaaggtggggttgtattggtt
cctgcccacccagttcatggagctgatgcccatctgacagccgagcacccccccatcaca
cccggcagcatcggtgatgatgacagcctgtcgcacagtggagacggaaggagggatgag
ggcaggaggagtgtttctccctctgaccctgtggaggctctcaatgcgttcacgaggaaa
atcggagcctttgtgaacaaacccagcacacaggtcacagcagccagtctggacttgccc
ttcgctgcatttgctcctcggggcctggactcagaggaaaatgaccccatggtgcaacca
ccagactctcctccttgcccgtcacccctgcaggccagcctccattctcagggctcggag
ggatcggggccgcaggatgactttgtcatggtcgactttcgtccagccttctctaaagac
gacctgctgccgatggatctgggcactttttacagagagtttcagaaccctcctcagctg
gccagtctctcgctacacatcagctcacagtcgatggccgacgacttggactcactgcca
gagaaactggccgtttatgagaaaaacatcgacgagttcgacgcttttgtggacatgctc
caatag
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