Acanthopagrus latus (yellowfin seabream): 119016445
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Entry
119016445 CDS
T08233
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03250
Viral life cycle - HIV-1
alat03272
Virion - Hepatitis viruses
alat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119016445
03272 Virion - Hepatitis viruses
119016445
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119016445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119016445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119016445
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
119016445
Exosome [BR:
alat04147
]
Exosomal proteins
Proteins found in most exosomes
119016445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
COG3_N
Motif
Other DBs
NCBI-GeneID:
119016445
NCBI-ProteinID:
XP_036948140
LinkDB
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Position
3:13557731..13572904
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AA seq
888 aa
AA seq
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MATFISVPLKKSSEVDLVKPLSKFVTASYPTGDEQGEYIRAVEELNKLRRNALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIASEQNLDNDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVIFLKATSDKMKDAVIAKLANQAADFYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCIMQANAELHQSVLAKQKKRFGEEIARLQHAAELVRTVASRYDEYVS
VKDLSDKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVRATAITPPLSQKFTDLFE
KMVPMAVQQSMSIYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARSIVQQGGLQSVEQLIRDLPELLTRNREILDESLKMLDDEETTDNELRTKFNQRW
NRTPSGDLYKPLRAEGTNFRSILDKAVQADQVVKDRYNTHCDMIALLCKPENELNAAIPS
ANPTKTLQGSEVVNVLRSQLAQLEEVKKERETLEGEIKAVTFDMSVCFLTALAQDGAINE
EQLSLAQLDQLYGSYNQRVQASLRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKELQQSIARE
PSAPNFNVPAYQSTPAAPAAGPTPAPRTVFTPPVQQQQQPQAKPQPPARPPPPSFTPQAA
STTPTSTPPTGPPTGNPPPMVPQSQAQGPPYPSYQGYPGYFQMPMGYNPYAYGQYNMPNM
PNMPNMPYSPYQATPGQGGYPAAPPTGQPGYPGYPQQPPQQQPYYPQQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtttatttcagtcccgttgaaaaagtcctctgaagtggatctggtgaaaccg
ctgtcgaaatttgtcacagcctcgtatccaacgggcgacgagcagggggaatacatccgc
gccgtggaggagttgaacaagctccgcagaaacgcgctgggaaggcctctggacaaacac
gagagctccctggagattctgctcagatactatgaccaactgtgtgctgttgagcctaag
ttccccttttctgaaaaccagctctgcttaaccttcacatggaaggacgcctttgataaa
ggatcactgttcggtggctcagtcaagctcgctttggcgagtttgggctacgagaagaca
tgcgtgttgttcaacgcagcggcgctggccagtcagatcgcctcagagcagaacctggac
aacgacgagggactgaaggctgcagccaaatactatcagctggccagcggagcgtttggc
cacatcaaggacacagtgctgtcagcacttaacagggagcccaccatggacatctcccct
gaaactgtgggcaccctgagcctcatcatgctggcccaggcccaggaggtcatcttcctc
aaagccacctcagataagatgaaggatgctgtcatcgcaaagctggccaatcaagcagcg
gatttctatggcgacgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgccggtgctggcggccaagcactgcatcatgcaagccaacgct
gagctgcaccagagcgtcctggctaaacagaagaagcgctttggagaagagattgcacgt
ctgcagcacgcagcagagctggtgaggacagtggcatctcgttacgacgagtatgtgagc
gttaaggacttgagcgataaaatcaaccgagccctcaccgcagccaaaaaagacaatgac
tttatctaccacgaccgcgtgcccgaggtcaaagatctggaacacatcggcaaagcagcg
ctggtcagagccaccgccatcacacctccactcagtcagaaattcacagacttgtttgag
aagatggtccccatggcggtgcagcagtccatgagcatttacagccagaggaaggctgag
actgttaacagactggtgggaacaatgagggaggccaccaatctctgcaacggggtgctg
gcgtccctgaacctgccagctgctctggaagatctgtctggagactctatcccacaatcc
attgctgaaaaggcacggtccatcgtgcagcaaggaggactgcagagcgtcgagcagctg
atcagagacctgccagagcttctgacccgcaacagagagatcctggacgagtctctgaag
atgctggatgatgaagagacgacagacaacgagctgagaaccaaattcaaccagcgctgg
aacagaactccctctggagacctctacaagcctctccgtgcagagggaactaacttccgc
agcatcttggacaaggccgtgcaggcggaccaggtcgtgaaggatcgctacaacacccac
tgtgacatgattgccctgctttgtaagccagagaacgagctcaacgctgccatcccctcc
gccaacccgaccaagacactgcagggcagcgaggtagtgaacgtgctgcgctcccagctc
gcccagctggaggaggtgaagaaggagagggagaccctggagggagagatcaaggccgtg
acctttgatatgtccgtttgcttcctgacggcgctcgcccaggacggggccatcaacgag
gagcagctgtcactcgcacagctcgaccagctgtacggttcctacaaccagagggtgcag
gccagcctccgcacacaggaagagctgcttggacaagttcagacgtcccaccaggagttc
agcagtctgaagcagtccaacacggaggccaaccagagggaggaggtgctgaagaagctg
gcttcagcccacgacagctacgttgagatcagcagcaacctgcgcgaaggcaccaagttc
tacaacgacctgacagaaatcctgctcaagttccagaacaaatgcagcgacatcgttttc
gctcgtaagacagagcgggatgaactacttaaggagctgcagcagagcatcgcccgagag
cccagcgctccaaacttcaacgtccccgcctatcagagcaccccagctgcccccgccgcc
ggcccaacccctgcaccacggaccgtatttactccacctgtccagcagcagcagcagccc
caggcaaagccccagccaccagcaaggcctccaccaccaagcttcacccctcaggcagca
tccaccactcccaccagcacaccacccactggccctcccactggcaaccctccacctatg
gttccacaatcccaggcccagggaccaccttaccccagctatcagggctatccagggtac
ttccagatgcctatgggctacaatccctatgcctacggccagtacaacatgcccaacatg
cccaacatgcctaatatgccctactcgccgtaccaggcgactccaggacagggaggctac
ccagcagccccacccaccggacagcctggctaccctggctacccacagcaaccccctcag
cagcagccctactaccctcagcaataa
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