Acanthopagrus latus (yellowfin seabream): 119016559
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Entry
119016559 CDS
T08233
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
alat03083
Polycomb repressive complex
alat04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119016559 (rbbp4)
03083 Polycomb repressive complex
119016559 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119016559 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119016559 (rbbp4)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119016559 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
119016559 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
119016559 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119016559 (rbbp4)
PRC2.2
119016559 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119016559 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
119016559 (rbbp4)
Chromatin remodeling factors
NuRD complex
119016559 (rbbp4)
NuRF complex
119016559 (rbbp4)
NuRF complex (fruit fly)
119016559 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
119016559
NCBI-ProteinID:
XP_036948361
LinkDB
All DBs
Position
3:20282691..20288060
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI
KISHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDASGECRPDLRLRGHQKE
GYGLSWNPNLSGSLLSASDDHTVCLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTD
PEATA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcaggtgcatttgatgatgctgttgaggagagggtgataaatgag
gagtacaagatctggaagaaaaacacccccttcctgtatgacctggttatgacccatgct
ttagagtggcccagcctgactgctcagtggctgcctgatgtctccaggccagaggggaag
gattacagtgtgcaccggctggtgttgggcactcacacatctgacgagcagaatcaccta
gttattgccagcgtccagctgcccaatgacgacgcccagtttgatgcctcacattatgac
agcgaaaaaggagagtttggaggctttggctctgtaagcggcaagatcgagatagaaatc
aagatcagccacgaaggagaggtgaaccgtgcccgctatatgccccaaaacccctgcatc
atcgctaccaagacccccacctcagatgtcctggtgtttgactacaccaagcacccctcc
aagccagatgcttcaggagagtgtcgccctgatctgcgtctcagaggccatcagaaagaa
ggctatggtctctcctggaatccaaatctgtctggctctctgcttagtgcatcagatgac
cacactgtctgcctgtgggacataagtgcggtgccaaaagaggggaagattgttgatgca
aagactattttcactggtcacactgccgtagtggaagatgtctcctggcacttgcttcac
gagtcactctttggatctgttgcagatgaccagaagctcatgatttgggacactcgttca
aacaacacctccaagcccagccatgcagtcgatgcccacacggcagaggtcaactgtttg
tcatttaacccttacagcgagttcatccttgcctctgggtctgcagacaagactgtggct
ctttgggacttgaggaacttgaaactgaagctgcattccttcgaatcacacaaggatgag
atcttccaggttcagtggtcacctcataacgagaccatactggcttccagtggaacagac
cgtcgcctcaatgtctgggacctcagtaaaatcggagaggagcagtcaccagaagatgca
gaggatggcccacctgagctgctgtttattcatggaggacacacagccaagatctctgac
ttctcttggaaccccaacgagccctgggtcatctgctctgtgtctgaagacaacattatg
caagtttggcaaatggctgagaacatctataacgatgaagatccagagggttcgacagac
cctgaagccacagcatag
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