Acanthopagrus latus (yellowfin seabream): 119016693
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Entry
119016693 CDS
T08233
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119016693 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119016693 (cnot3b)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119016693 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119016693 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
119016693
NCBI-ProteinID:
XP_036948713
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All DBs
Position
3:complement(2951548..2979535)
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AA seq
958 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRHHI
RMLETILRMLDNDSVQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQTLVA
TSPPGHSHLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSSSSSSSVSGLTSSSLVSMATIAVGGSSSSSGGNS
HHGSSGGLLSNTSAGSYSNATQQPPHPSAQQQQQQQQAKNLVSSASSVPNSNPITSSNSH
PASSTSSPPNVSTQGLFTSVSQSQVLSVPTPTSNSLGLSLGLSLGKGGSITTSPMSGSLG
LSGMPASLSGMASLLSSSTPAPYAQAAASGAVGSGLPGSLGGVITTTTNSALGSIGSGSI
TVGGPTSSTGGLLGSVPVVTSIGSGILGLTSSQSGMQGSSLVSLSPVGGLAPGSGVGVIG
SNGGSSGSAGSGVVGGNSSLSIRPPSQQKQNGSTNITGYSAVVADSTTDSALNSASQSQS
SQSSSLTSTANQPANWDKAYWYANEMCKDTGPSLLGSLSLSSSSPSPAFYSEAKTVSGSS
LLNGPLSYSQSSDVIKPQEPLSSLKSMAERAALSSGMEGDVPSLHLTPDIFPSSTTASSG
PPSAPQPSLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRCSEM
QYLMRNPCPTLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggaa
ggagttgaacagtttgaagacatttggcaaaagcttcacaatgcagccaacgcaaaccag
aaggaaaaatatgaagcagacctcaagaaagagattaaaaagctccagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagagaac
cgcaaactaatagaaacgcaaatggagcggttcaaaatagtggaaagagaaacgaagacg
aaagcgtactcaaaagaagggttgggtctggcccagaaggtggacccggcccagaaagag
aaggaggaggtcggcacgtggctaacgaacacgatagacacgttgaacatgcaggtggat
cagttcgagagcgaagtggagtctctttcagtccagaccaggaaaaagaaaggagacaag
gagaaacaggaccggatcgaggagctaaagaagttcatcgagaagcaccggcaccacatc
cggatgctggagacaattctgaggatgctggacaacgactccgtgcaggtggactccatc
aggaagatcaaggatgatgtggagtattatctcgactcgtcgcaggatccagacttcgag
gagaacgagtttctgtacgatgacctcgacctggaagacatccctcagacgctggtcgcc
acctccccgccgggacactcgcacctggaggacgagatcttccagcactccagcagcacg
cccacctccaccacctcatcctcacccatccccccgtcaccagccacttgcactacggag
aactcagaagacgacaagaagaggggacgttcaacagacagcgaagttagtcagtcacct
gtgaagaacggaaacccctcttcctcgttatcttcctcctcctcctcttcctcttcctct
tcctcctcctcttcctcctcttcttcttcttcctccgtctcgggactgacctcatcctcc
ctggtctctatggcgaccatcgctgtggggggaagcagcagcagctccgggggcaacagt
catcacggcagctcggggggtctcctctccaacacttccgccggcagctacagcaacgcc
acccagcagccgccacacccgtcagcacagcagcagcagcagcagcagcaggccaaaaac
ttagttagctccgcctcctcagttcccaactccaaccccatcacctccagcaacagccac
ccagcctcctccacctcctcaccccccaacgtcagcacacaggggctcttcacttcagtc
agtcagtcccaggttctgtcagtgcccacgcccacctccaacagtctcggcctcagcctg
ggcctctcgctggggaaaggcggctccatcaccacaagcccgatgtcggggagcctgggt
ctgtcagggatgccggcgtccctgagcggcatggcgagcctcctctccagctccaccccg
gcaccctacgctcaggcagctgcctcgggcgccgtcggctccggcctgccaggctctctg
ggcggcgtcatcaccaccacgaccaacagcgcactgggctccatcggcagcgggagcatc
acagtcggcgggccgacgtcctcgaccggaggtctgctgggctcggtgccagtggtgacc
agcatcggctcgggtattctgggtttgacttctagtcagtcggggatgcaggggtcttct
ctggtgtcgctgagcccagtcggaggtttagcgccgggtagtggagtcggagtcatcggg
agcaacggaggcagctcgggatcagcagggagcggagtggtgggaggaaactcgtcactc
tccatcaggccgcccagccaacagaagcagaacggtagcaccaacatcacaggttacagt
gctgtggtagcagacagcacaacagactccgccctcaacagtgccagccaatcacaaagc
agccaatcttcatctttgacctccacagccaatcagccggctaactgggataaagcttac
tggtatgcaaatgaaatgtgtaaggacactggtcccagtttactgggctctttgagtttg
tcgtccagctccccgtcgccggccttctacagcgaggctaaaacagtgagcggcagcagc
ctgctgaacggcccgctgtcctactcgcagtcctccgacgtcatcaagccccaggagcct
ctgagcagcctgaagtccatggccgagcgagcagcactcagctcagggatggagggagac
gtgccctccctgcacctcaccccagacatcttccccagcagcactacggcctcctcgggc
cctccgtcagcacctcagccctcgctgtcggaggtcagcatccccccgtcgttgggggtc
tgcccgctggggccggtccccctgtccaaagaccagctctaccaacaggccatggaggag
gcggcgtggacgcacatgccccacccgtccgactccgagaggatcaggtgcagtgagatg
cagtacctgatgaggaacccgtgccccaccctgcctttccaccaccaggtgccaccgccc
cactccgacaccgtcgagttttaccagagactctccacggaaacgctcttcttcatcttt
tactacctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcg
tggaggttccacacaaagtacatgatgtggtttcagcggcacgaagagcccaagaccatc
actgatgagtttgagcagggaacatacatttactttgactatgaaaaatggggccagcgg
aagaaggaaggcttcacgtttgagtaccggtacctcgaagaccgagacctccagtga
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