Acanthopagrus latus (yellowfin seabream): 119016704
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Entry
119016704 CDS
T08233
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119016704 (shoc2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
119016704
NCBI-ProteinID:
XP_036948745
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Position
1:complement(21428957..21442199)
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AA seq
582 aa
AA seq
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MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALAGLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcct
gcggggaaagaaagggaaaaggaggccaaggctctagccggcttagtcaaggatggtggc
aaagaaacgaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagctca
acaccgggtgttgccttctccgttgacaatacgataaagcggccaaaccctgcaccaggt
acgcgcaagaagtccagcaatgccgaggtgatcaaagagcttaacaagtgccgggaggag
aactcaatgagactagatttatctaaacggtccattcacatgctgcccacctccattaag
gagttgacgcagctggctgaactctacttatacagcaacaagctgcagagcctgccggcc
gaggtgggttgcctgtcaggcctggtcaccttggccctgagtgagaactccctgaccagt
ttgcctgactccttggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccacctgttgtctaccggttgacttcacttaccacgctgtacctgcgc
ttcaaccgcatcacaacagtggagaaggacatccgaaacctatccaagctcaccatgctc
agcatccgtgagaacaagattaaacagctgcccgcagagataggggagctgtgcagcctc
attactctggatgttgcccacaaccagttggagcacctaccgaaggagattggcaattgc
acacagataacaaacctcgacttgcagcacaatgagctcttagacctcccagagactata
ggcaatctggcaagcataaatcgcttaggtctgagatacaacagattgtcagccattccc
agatcattagctaaatgtcgagaactggaggagttaaaccttgaaaacaacaacatttca
gtgttgccagagggcctactatcaagtttggtcaacctgaccagtctaacactggcaagg
aactgcttccagtcgtaccctgtgggcggaccatcccagttttccaccatctactccctc
aacatggagcacaaccgcatcaacaagatcccctttggtatcttctccagggccaaagtg
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccactggactttggcaca
tggactagcatggttgagctgaacctggccaccaatcagctgacaaagatcccagaggat
gtctgtggtttagtctctctggaggttttaatattgtccaataatcttctcaagaagtta
ccacatggtattggaaatctgagaaagctacgggagctcgacttggaggagaacaagttg
gaatgtctacctaatgaaattgcttatcttaaagatttacagaaattggtgttgacaaat
aatcagctgacaacgttacccaggggcatcggccacctcaccaacctgactcatcttggt
ttgggggagaacctgctgcaacaccttccggaggagattggtacactggagaacctggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcattgagaactgtcccctcagccacctgccgccacagatt
gtcgcaggaggcccctccttcattatccagttcctcaagatgcagggaccgtaccgtgcc
atggtctga
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