Acanthopagrus latus (yellowfin seabream): 119016872
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Entry
119016872 CDS
T08233
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119016872 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119016872 (arid1ab)
03021 Transcription machinery [BR:
alat03021
]
119016872 (arid1ab)
03036 Chromosome and associated proteins [BR:
alat03036
]
119016872 (arid1ab)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
ARID
119016872 (arid1ab)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119016872 (arid1ab)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119016872 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119016872
NCBI-ProteinID:
XP_036949114
LinkDB
All DBs
Position
3:complement(23443229..23498466)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKDPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDSGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPSYPQGDYNNQEGANKGPGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRSQPYGGPNPYSQQQQGPPTGPGPQHGGSYPGQGYGPPGPQRYPMGMQS
RTPGTMGSMQYGQQMSAYGQQGPGGYSQQSQSYYGQHGPPPHPGQQQQQQPQQPQQQQQP
QQQQPPYAGQPQGTSGTPYPQQGHPSQPPGQHGQSGPPYQQSQGPHGPTPGQPPYNQPQQ
SQPGQPPYVPPQQQQQQQQQQQQQQQQQQQQGPGPQSQQGPQGQPGYPQPTGSGQPPQQQ
PPQQQQPQQQQGPPQQQQQQQQQQQQQQQQQPQQQQQQQQPGGPPPQTQQPPGHGQQGQP
SPYSQTPPLQQQQPPQQQQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPMASNKSSQE
DSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHL
PGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSMNQPAMGQD
RVYMRNPQMPPYGSPGQPGSALSPRQSSGGQIHSGMGPYPQNNSMGNYGPQGGQYGPQGY
PRQPGYTGMPNANYPPSGPGMGGTINPMPGQGSGAPYGGIPPGRIGPGQMGARPYGPAMA
SNMAGMPPQVGSGMCPPPGMNRKDGGPAMHHGPTNSIHNRPPGYPNMSQGMMGAGSPYGP
GMNSMHSMMNQGGPGPYPMGANMANNTPGMAPSTEFGMEKMAPAPKMNNKVEGTPKPESK
KKSSSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMNNLPAVGRKPLDLFRLY
VSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP
DFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHTQMPPM
PGVRSSVNLQDPFADGGDPAFSRRNAMTPNSQGYQPGMGGPEMMGRMGPYESNKDPFGGM
RKAGEQFMQPGPNSGMGEQYNRGPPGPMANMQMGQRQQYPYGYDRRQEPGMGPDGTMGPG
APQPNMMPSGADTGMYSPSRPPPQQRHDSYTNQFPGQGAPPGGPYPNQQPGMYPQQQPNY
KRPVDGGYGPPAKRHEGEMYNVPYSGQQQPGPQSSGPQGQQDMYNQYNAYPGGERRPPGP
QNQFPFPFGRDRGPTPAGPNSQSPMPPQMMATPMPSGPDGPQGPMWQGRNEMGYPNYPNR
QGPPVPGQGPSYHGMNRSEEMMPSDQRMNHEGQWPSHVNQRQPPFGPGGSGPPMTRPLPS
TYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQP
MIRRDVAFPPGSVEASQPHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINI
LLYDDNSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPNAAEDS
DDDMPMPEGEDMDLDEDDEEDEEVEETKANPDTSSLVQVKQEEESSQKHKSSEDEEEEKE
RESSIKEPNTSTSGSSQDPNLHMEKPKQASKFDKLPIKVVRKKNPFLVNHSSKLGQRQSF
DSGLIHWSIGGGDTTEHIQTHFESRMDLLKQRKRTATATESGKKVQVTETVMENSEKAKS
NGENKPRQQQPQSSEPQKSPAEKTPPPLPIGAPVTATIDDVLSARPGSVTEEAVRGGAEE
QKENGKYLFSINPDLQSRRNIKILEDEPHSKDETPLSTLSYWQDSLARRCICVSNIVRSL
SFVPGNDQEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWD
CLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGPHGS
LSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCREMAVVLL
ANLAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGAPQFEPTSVDM
MRRAARALHALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggttgccagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gatccgggacctgacggcggatcccctggtcagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaatcagaatgattcaggtgggcccgaagggaataaccatccc
gggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccctaac
cattataacaactacagcccgttccagaacaggacttcttatcagggccaaggatacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacagctatggctgcctcttacaataatcagaggtataacatg
ggaaaccaacaacctacgtctacgccaactttaaatcagcttttgacatccccaagctct
gccaggagctacccgagttacccccaaggagactataacaatcaggaaggggccaataag
ggaccaggagatatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcccatgagcccgggaaacactggacagcctccaaacagaaatcag
cctccaagcccaatggaccaggtagggaagatgcgtagccagccatatggaggacccaac
ccctactctcagcagcagcaagggccccctacagggcctggaccccagcatggaggttct
tacccagggcagggctacggacctccaggccctcagaggtatcctatggggatgcagagc
agaacaccaggcactatgggcagcatgcagtatggacagcagatgtcagcctatggacaa
caggggccaggtggctacagccagcagagccagagttactatggtcagcacggcccccct
cctcaccctggccagcagcagcagcagcagccgcagcagccacagcagcagcagcagccg
cagcagcagcagcctccatacgcgggccaaccccagggcacctctggaaccccctatccc
cagcagggccacccttcacagcctcctggccaacacgggcagtcaggaccaccctaccaa
caatcccaaggtccccacggccctactccagggcagcctccctataaccagccccaacag
tctcagccaggacagccaccctatgtccctccccagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagggaccaggtcctcaaagtcaacagggc
ccacagggccagccaggctatccacaacccacaggatcagggcagccaccccagcagcaa
ccccctcagcagcagcaaccgcagcagcagcaagggcccccgcaacaacaacaacagcaa
cagcagcagcagcaacaacaacaacaacaacaaccacaacaacaacaacaacaacaacaa
ccaggaggtccacctcctcaaacccagcaacctccaggtcatggccagcagggtcaacca
tctccttactcccagacaccccccttgcaacagcagcagccaccacagcagcagcaacag
cagtcaccatatcagaggttcccacctcctccacaggaactctcccaggattccttcagc
tcgcagtccagcgctcctccttccaaccagcccatggcctccaacaagagcagtcaggaa
gacagcatgcaaggccggccatctagtctgccggacctttcgggatccattgatgacttg
ccaactggtacagagggtgccctgagcccaggtgtcagcacctcaggggtgtccagcagt
cagggcgagcagagcaatcctgcccagtcgcccttctctccgcacacttcaccccacctg
ccaggtatacgtgggccctcgccatcacctgtgggttctcctgctagtgtcaccccctcc
cgcactggcccactgtcccctgctgctgtgccaggtaatcagatgcctccccggccaccc
agtgtccagtcggacagcatcatgcactcttccatgaaccagccagccatgggccaggac
agggtgtacatgcggaaccctcagatgcccccctatgggtcccctggccagcctggctct
gccttatctccacgccagtcttcaggaggccagatacatagtggaatgggaccttatccc
cagaacaactccatgggaaactacgggcctcagggagggcagtacggtccacaaggttac
cccaggcagcctggctacacagggatgcctaatgccaactaccctcccagtggtcccggc
atgggcggtaccataaaccccatgcctggtcaaggcagcggggctccgtacggaggcatc
ccaccaggcaggataggcccggggcagatgggtgcacggccctacggtcctgcaatggcc
tcaaacatggctggcatgcctcctcaggtgggctctgggatgtgtccccctcccggcatg
aacaggaaggacggcggccccgccatgcaccacggacccacaaactccatacacaacagg
ccacctggctaccctaacatgtcccagggcatgatgggagcaggctctccatacggccct
ggcatgaacagcatgcacagtatgatgaaccagggaggtccagggccatacccaatggga
gcaaatatggccaacaacacccctggaatggctcctagtacggagtttggcatggagaaa
atggcccctgcaccgaagatgaacaacaaagtggaggggacgcccaagcctgaatccaaa
aagaagtcgagctcatccaccattaccaatgagaagatcactcgtctatacgagcttggc
ccagagccagagaggaagatgtgggtagatcgatatctggcgtttgctgaggagaaggcc
atgggcatgaacaacctacccgcagtgggacgcaagcctctcgatctcttcagactctac
gtttccgtcaaagagatcggcggcctcacccaagtgaataagaacaagaagtggagggag
ctggccaccaacctgaacgtgggcacgtcaagcagcgcggccagttcgctcaagaaacag
tacatccagtgtttgtacgccttcgagtgcaagatcgagcgcggcgaggacccgcccccg
gacttcttcaacacggacaccaaaaagaaccagcccaagatccagcctcccagcccagct
ggttctggatccctgcaaggaccccagacgcctcagtccaccagtagttcgatggcagag
gggggagacctgaagccccccaccccagcctccaccccacacacacaaatgcctccaatg
cccggtgtcaggagtagcgttaatctgcaggacccctttgctgatggtggagatccagcg
ttttccagaaggaacgccatgactcctaactcacaaggctaccaacccggcatgggtggc
ccagagatgatgggccgaatgggtccctatgagtcaaacaaggacccctttggtggtatg
aggaaagctggagagcagttcatgcaaccaggccccaacagtggaatgggagaacagtat
aacagaggccctccaggccctatggccaacatgcagatgggccagaggcaacagtaccct
tacggatatgaccgaagacaggagccaggcatgggacctgatggcaccatgggaccagga
gctcctcagccaaacatgatgccttctggagccgacacagggatgtactcgcccagccgc
cctccaccacagcaacggcatgactcctataccaatcagttccctggccaaggagctccc
cctggtggcccatacccaaatcaacagccaggaatgtatccacagcagcaaccgaactac
aagcgtcctgtagatggagggtatggaccaccagccaagcgccatgagggagaaatgtat
aatgtaccctacagtggtcaacagcagccaggaccccagtcctctgggccccagggccaa
caggacatgtataatcagtataatgcataccctggaggagaacgcagaccaccaggccca
cagaaccagttcccttttcctttcggccgggaccgaggaccgacacctgcaggccccaac
tcccagtccccaatgcctccccagatgatggcaacccccatgccttcaggtcctgacggc
ccccagggcccaatgtggcagggtcgcaatgagatgggctaccccaactatcccaaccga
caggggcctcctgtacccggccagggccccagctaccatggcatgaaccgctcggaggag
atgatgccgtcagaccagcgcatgaaccatgaggggcagtggcctagccacgtcaaccag
cggcagccgccatttggccccggtggttccggacctcccatgaccagacccctgccatcc
acctaccagacttcccagaaccacattcctcaggtgtcaagcccagcacccatgccacgg
cccatggaaagcaggacgtctcccagcaagtcaccctacatgcatccgggcattaaggtg
cagaaagctggaccaccggtacccgcgtcacatattggccaggcccctgtgcagcaaccc
atgatcaggcgagatgtggccttccctcctggctctgtggaggcctcccaaccccacctg
aagccccgcaggcgactcaccatgaaggacattggcactcctgaggcttggagagtgatg
atgtcactaaagtcaggcttactagctgaaagcacctgggccttggacaccatcaacatt
ttactgtatgacgacaatagcatttctactttcaacttgtgccagctgcctggattcttg
gagctggttgtggagtacttccgacgctgcctcattgagatctttggcatcttaaaggag
tatgaagtaggagaccccggccagcgcaccctcatagaccctaacgctgcagaggactct
gatgatgacatgcccatgcctgaaggcgaggacatggacttggacgaagacgacgaagag
gatgaggaagtggaggaaacaaaggccaatcctgacacctcctcgctggtccaggtgaaa
caggaggaggagagctcacagaaacacaagtcttcagaggatgaggaagaggagaaggaa
agggagtcttctatcaaggaacccaatacctctacctcagggtcctcccaggaccccaac
ctccacatggagaagcccaagcaggctagcaagtttgataaactccccatcaaggtggtg
aggaagaagaaccccttcctggtgaaccactcgtccaagcttgggcagcggcaaagcttt
gacagcggcctgatacactggagcattggtggtggtgacactaccgaacatatccagacc
cactttgagagccgaatggaccttctgaagcaacggaaacgcacagcaacagccactgag
agcggcaagaaagttcaggtgactgagactgtgatggaaaactcggagaaagccaagtcc
aacggggagaacaagcctcggcagcagcagccccagtcttctgaacctcagaagtctcca
gcggagaagacgcctcctcctcttcccattggtgctccggtcactgccaccattgatgat
gtactatctgcccgcccaggctcggtcacggaggaagcggttcgtggaggtgctgaagag
cagaaagagaacggcaagtacttgttcagcatcaaccctgacctccagagccgacgcaac
atcaagatcctggaggacgagcctcacagcaaggatgaaacgccacttagcaccctgtca
tactggcaggactcgttagctcggcgctgcatctgcgtgtccaacattgtgcgaagcctc
tccttcgttcccggaaacgaccaggagatgtcaaaacacccagggctcctgctgctgttg
ggccgcctcgtgttgcttcaccacaggcaccctgagcgcaaacaggcgcccgtcacctac
gagaaggaggaagaggaggatgaaggcgtgagttgcgagagagatgagtggtggtgggat
tgcctcgaggtgttaagggagaactgcctggtcactctggcgaacatctcaggccagctg
gacctttctatctacccagagagtatatgcctgccgctgctggatggcctgctccactgg
gccgtctgcccctcagcagaggctctggaccccttccccacgctggggccccacggctca
ctttccccccagagactggtcctcgagaccctcagcaagctcagcatccaggacaacaac
gtcgacctcattctggcaacgccgccgttcagccgcttggagaagctgtacggctcactg
gtgcgtctggttggtgaacgcaaggtggccgtttgccgggaaatggcggtcgtcctgttg
gctaacttggcccagggtgacagcctagcagcgcgggctatcgctgtacagaaaggcagc
gtgggtaacctgctgggcttcctggaggacagcctagctgccacacagtaccagcagagc
cagagctctctgcttcaaatgcagggcgcacctcagtttgagcccaccagtgtggacatg
atgcggcgggcagcccgggccctgcatgccctggccaaggtggaggaaaaccactcggag
ttcactttgtacgagtcgcggctactggacatctcagtgtctccacttatgaactctctg
gtgtcccaagtgatctgtgacgtactgtttctgattggccagtcatga
DBGET
integrated database retrieval system
