Acanthopagrus latus (yellowfin seabream): 119017053
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Entry
119017053 CDS
T08233
Symbol
rab42a
Name
(RefSeq) ras-related protein Rab-42a
KO
K07925
Ras-related protein Rab-39B
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119017053 (rab42a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119017053 (rab42a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
alat04031
]
119017053 (rab42a)
Membrane trafficking [BR:
alat04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
119017053 (rab42a)
GTP-binding proteins [BR:
alat04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
119017053 (rab42a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SRPRB
Motif
Other DBs
NCBI-GeneID:
119017053
NCBI-ProteinID:
XP_036949350
LinkDB
All DBs
Position
3:complement(24543691..24550289)
Genome browser
AA seq
218 aa
AA seq
DB search
MDILWQYQFRIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSLDIEPGVKIKL
QLWDTAGQERFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHKEVSEHILPHHMVYIL
IGHKSDLNKDRKVSRDEAEQLAAELGIRYVETSAKCNSNVDRAFELLTRDIYELMKMGEI
VTRDGWDGVKSGLTAKVLYPAEDEEELATATAEKGCHC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggatattttgtggcaataccagttcagaatcatcttactcggggactccacggtgggg
aagtcgtcgttgctgaaacgcttcacggacggaatttacagcgatgtagcggatccgacg
gtcggggtggatttttatgcgcgctcgcttgatatcgagcccggggtgaaaatcaagctt
cagctgtgggacacggctggacaggaacgattcaggtccatcacaacatcttactatcgc
aactctgtcggcgggctactagtcttcgacctcaccaatcgcaagacctttgaccatgtg
agggagtggcacaaggaagtgagtgagcacattctgcctcaccacatggtctacatcctc
ataggccacaaaagcgatctcaacaaggaccgcaaggtgagccgggacgaggcggagcag
ctggctgccgagctgggcatccgctacgtggagacgtcagccaagtgcaacagcaacgtg
gatcgggccttcgagctgctgaccagagacatctacgagctgatgaagatgggcgagatt
gtcacccgagacggctgggacggtgtgaagagcggcctcaccgccaaggtcctctacccg
gcagaggacgaagaggaactagctaccgcaaccgctgagaagggctgccactgctga
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