Acanthopagrus latus (yellowfin seabream): 119017059
Help
Entry
119017059 CDS
T08233
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119017059 (trim71)
04121 Ubiquitin system [BR:
alat04121
]
119017059 (trim71)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119017059 (trim71)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119017059 (trim71)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119017059 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119017059
NCBI-ProteinID:
XP_036949362
LinkDB
All DBs
Position
3:complement(20638434..20672782)
Genome browser
AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEEQIQNKNG
HHHPRGILGGGSSGFHHSHGGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCVRA
HQRVRLTKDHFIECLGENLHLGRVNANTNSGQPGVSGSIAQSLQNNFALLSLFQDRMSFC
QHHDNEVFLFFCESCSVPICRECSVGRHIGHTFVYLQDAVQDCRAITIQLLADAQQGRQA
VQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALDERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQVLDEGRHLDVLLARERMLTQIHELKALRGLLQPQEDDR
FMFTPPDQALYIAIQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGEPRL
SGGDTVSAIIMSGTDGNLSAAEVTDHQNGSYTVSYLPKCEGEHLVSVLVCNQHIQGSPYK
VIVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHR
VQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgactcggacctgcagacttgtccgctctgcaaggagctgtgcggc
tcctctgctcccatttcctccagctcttctacctcctcatcttcatcacatacctcgtcc
tcctccagccagactacgaggaggctgcacgtcctgccctgcctccatgccttctgcagg
cagtgcctggagggccagcgcagtcctggggacccgctgaagctgcggtgccccacctgc
gaccagaaggtgtccatctctgaggccggggtggactccctgccttcctccaacttcctc
ttcagcaacctgctggatgtggtggtgagctctgaggagcagatccagaacaagaacggc
caccatcatccccggggaatcttaggtggaggctccagcggcttccatcactctcatgga
ggcctgctgcaccctcaccacctgggagagcctcagtgcagctcctgcgatgaggagaac
ccagccacctcccactgccttgactgccaggagtatctgtgtgataactgtgtgcgggca
caccagcgggtgcggctgaccaaggaccacttcatcgagtgcctgggagaaaacctccac
cttggccgagtcaacgccaacaccaactcgggccagccgggggtgtcggggtccatcgca
cagtccctgcagaacaacttcgccctgctgtccctcttccaggatcgcatgagtttctgc
caacaccatgacaatgaggtattcctgttcttctgtgaaagctgctcggtgcctatctgc
agggagtgcagcgtgggccgccacatcggccacaccttcgtttatctacaagacgccgta
caggactgcagggccatcaccatccagctgttggcagacgcacagcaggggcgacaggct
gtgcagctaagcatggagaaggtgcaggccatggcagaacaggtggagatcaaagccaag
gtggtgcagactgaagtgaaggccctggtcctcagacacaagaaagcgctggacgagaga
gagtgtgaactactgtggaaggtggagaagatccgtcaggtgaaggcaaagtctttgtac
ctgcaggtggagaagctgcatcagagtctgaccaagttggacagcaccatcgctgctgtc
agccaggtgctggacgagggccgccacctcgacgtgctgttagccagggagcgaatgctc
acccagatccatgaactgaaggctctgaggggcttgctgcaaccacaagaggatgaccgc
ttcatgttcactcctcctgaccaggctctgtacatagccatccagtccatgggtctcatc
agcagcggagcttttgccccagtcaccaaagctcatggcgagggtctaaaaagtgcgctt
cgtggcaagcccgcctccttcactgtgattggatacgaccacgatggtgagccacgtctc
tctggaggggacacggtgtccgccatcatcatgtcaggtacggatggcaacctgtctgca
gcggaggtaacagaccaccagaatggctcgtacaccgtcagctacctgcccaaatgtgag
ggggagcacctggtgtcggtgttggtgtgtaaccagcatatccagggcagcccctacaag
gtgatcgtgaagtcagggcggagctatggctccctgggctcgcaagtatcatcctttggg
tgcgaaggggagggagatggacagctgtgtcgtccgtggggcatcagcgtggacaaggag
ggatacgtggtggtggctgatcgcagcaacaaccgcatacagatattcaagccttgcggt
gctttccaccataagtttggctctctgggttcccggcctggtcagtttgatcgtccagct
ggggttgcatgtgacagtcagagacgaatcattgtggctgataaggacaatcaccgtgta
caggtgtttacttttgagggccagttcctgctgaagtttggggaaaagggtaccaagaat
ggacagttcaactatccctgggatgtggctgtcaactctgagggtaagatcctggtctca
gacaccaggaaccaccgcgtgcagctcttcgcccctgacggctctttcctcaacaagtat
ggctttgaaggggccctgtggaaacactttgattctcccagaggcgtggcctttaaccac
gaagaccacctggtggtgaccgacttcaacaaccaccggctcctggtcatccggccagac
tgccagtctgctcgctttctgggctctgagggcaccgggaacgggcagtttctgcggccc
cagggtgtcgctgtggaccaggagaaccgcattatcgtggcggactcccgcaaccacaga
gtccaagtgtttgaacccaacggaaacttcttatgcaaatttggcacacaggggagtggc
ttcggacagatggatcgcccctctggcgtagctgtgacgcctgacggagtcattgtggtt
gttgactttggaaataatcgcatcctcaagttctaa
DBGET
integrated database retrieval system
