Acanthopagrus latus (yellowfin seabream): 119017087
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Entry
119017087 CDS
T08233
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119017087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119017087
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-60S particles
RNases
119017087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
119017087
NCBI-ProteinID:
XP_036949422
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All DBs
Position
1:5850120..5858525
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AA seq
819 aa
AA seq
DB search
MDPTTSLKRKYVAPTAHKNGKRLLTVQEGNGTLECERPHRSPRISVLLDRLQEPITMNDL
TELLHYAALGKAGGVKQPSWCRLLHQKRIAALNVVIVEGMTQSHFYKHYLALLHLRSNYT
TRVTFMPYPDVASRIFSSEVPKSATLSPRHKESSQLHKALKHHPVIAKFGTQRRGLTAYV
LSQEEMIKKNYPVKGMPGFEEFMCTNSADCVTDCSPMFGLDCEMCLTEKGNELARVSLVD
NDGNCVMDELVKPPNQIINYLTRFSGITAAMLKPVKTTLRDVQVKLRDLLPSDAVLVGHS
VNSDLLALKLIHPHVIDTSLLYRREFGQRFKLKVLAETVLRREIQTEERMGHNPTEDAVA
ALELAQYFIKTGPRQVVELHLEELWGYTIQEEPTDCEPEPEPEPEPAPSHRFADVLHTHG
RKVSYIGKRSDIALNLCNQQWHNTDKEVLATFRSQASCPFLSVLPFSSFSDCLKRCTLHQ
QLQYERVCANLRDLCVVFAGPFPAGFSEGEVRRLFCCCGPVRKIKMMNATVRVHAKVEFE
LLEGAVLALTTLNGLSVQGQLIKVQRPVDESMLDVDLTLDALMCDSLNSSNLYTVKLNPR
VAQRVHFPANINGHAFGSGSTAVDGFPPAKVNGTQHTTGKFKLSEEMVRETFSPFGTVDQ
VALHPKPGKHARHALIKFKSSEEKYAALSSTKDLWRENYLLCPSLTPPHLPSWVALTTAI
TTVDPDEDAAEDEERTHTVTSSEDQEMAPAIRKLDRRLWKLFRSLPDGTLSVVILPGHTS
AHGHSPGLCLMEVKNGQQWKKAGRGESRPAGVDLLCHLK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatcccacaacgtccctcaaaagaaaatacgtcgcccccacagctcacaagaacggc
aaacgattactaactgtgcaggaaggcaatgggacgctggagtgtgaacgtccacaccgc
tcaccgaggatctctgtgctgctcgaccgccttcaggaacccattacaatgaacgatctg
acggagctgcttcattatgctgctctggggaaagcaggtggcgttaaacagcccagttgg
tgtcgtctcctccatcagaagaggattgcagctttgaatgtggtgatcgtggagggcatg
acacagagtcacttttacaaacactacctcgccctgctacacctcaggagcaactacacc
actagggtcacctttatgccatatcctgatgtggcctccagaatcttcagcagtgaagtt
cctaaatcagccacactgtccccaagacacaaagaaagcagtcaattgcacaaagcgctg
aagcatcacccagtaatcgcaaagtttgggacacaaaggcgaggactgacagcgtatgtt
ctctctcaggaggagatgatcaagaaaaactaccctgtcaaaggaatgccaggctttgaa
gaattcatgtgcacaaacagtgctgactgcgtgactgactgcagccctatgtttggactg
gactgtgaaatgtgtctaacagagaagggaaatgagttggctcgagtttctctggtggat
aacgatgggaattgtgtgatggacgagctggtgaagcctccaaaccaaatcatcaactac
ctcaccaggttttctggtataactgcagcgatgttgaaaccagtaaagaccaccttgcgg
gacgttcaggtgaagctcagggatttgttgccaagcgatgcagttctggtgggccattca
gttaacagcgacctcctggctctgaaactgatccaccctcatgtcatcgacacctcgctg
ctgtacaggagagagtttggacagaggtttaaactgaaggtcctggctgagacggtgctc
aggagggagatacaaactgaagagaggatgggtcataatcccactgaggatgctgtggca
gccctggagctcgctcagtacttcattaaaacaggacctcgccaggttgtagaacttcac
ctagaggaactgtggggatacacaattcaggaggagccgactgactgtgaacctgaacct
gaacctgaacctgaacctgcaccgagtcacaggtttgctgacgtattgcacacacacggc
cggaaagtatcctatatagggaagcgctctgacatcgcactgaatctgtgcaatcagcag
tggcacaacactgacaaagaggtgttggccactttcaggagtcaggccagctgtccgttc
ctctcagtgctcccgttttcttccttctcagactgtctgaagaggtgcactcttcaccag
cagctgcagtacgagagggtgtgtgcaaacctccgagatttgtgcgtcgtgtttgccggg
ccgtttcccgcgggtttctctgagggggaagtgagacggctgttctgttgctgcggaccg
gttcggaaaatcaaaatgatgaacgcaacagtcagggttcatgcaaaggttgagtttgag
ctgctggagggagctgtgctggctttaactactctgaatggactttctgtgcagggacag
ctcatcaaggtccagcggcccgttgatgagtcaatgctggatgtggatctgactcttgat
gctttgatgtgtgacagtctgaacagcagtaacctctacactgttaaattaaacccccgt
gtggctcagcgggtgcactttcctgcaaacatcaatggacacgctttcggctctggaagt
acagctgtcgacgggtttcctcctgccaaagtcaacggcacccagcacaccaccgggaag
tttaaactgtctgaggagatggtccgagagacattttccccctttggcacagtggatcaa
gttgccttgcaccccaaacctggaaaacatgcaaggcatgcactcataaagttcaagagt
tcagaggaaaaatatgctgccctcagctccaccaaggacctctggagggaaaactacctc
ctctgtccatccctaactccgccccacttaccttcttgggttgccttgacaactgcaatc
accactgtggatcctgacgaggacgcagcagaagacgaggagaggacgcacacggtcacc
agttctgaggaccaggaaatggctcccgcaatcaggaagttggaccgccggctgtggaag
ctcttcagatctctgccagacggcaccctgtcagtggtcattctgcccggacacaccagc
gctcatggacacagtcctggtttgtgccttatggaggtcaagaatggacaacagtggaaa
aaagctggtcggggagaatccagaccagcaggggttgatctcctgtgtcacttgaagtga
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