Acanthopagrus latus (yellowfin seabream): 119017108
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Entry
119017108 CDS
T08233
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119017108 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119017108 (pex1)
Membrane trafficking [BR:
alat04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
119017108 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
RNA_helicase
nSTAND3
ABC_tran
AAA_28
AAA_18
AAA_33
NPHP3_N
DUF815
AAA_5
NACHT
TIP49
Sigma54_activ_2
AAA_2
AAA_29
ATP-synt_ab
RuvB_N
Mg_chelatase
Viral_helicase1
ATPase
TsaE
AAA_7
IstB_IS21
FtsK_SpoIIIE
ORC-CDC6-like
AAA_25
CLP1_P
Parvo_NS1
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
119017108
NCBI-ProteinID:
XP_036949450
LinkDB
All DBs
Position
3:13862319..13873742
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AA seq
1248 aa
AA seq
DB search
MFCNQGIQPVTVVFNNTKNCFLHLSSKLALHLSLNENQALELSWDHGSPVFLSWTHNRTS
SSLDSHKVELCRQLGEKLGLRDGEQGFLRPCHQVSSVRQVFVEPLSADDWEILELHSAAL
EQQLLDQIRVVFQDAVFPVWVDSHTAIYIQIASLSPSVPYGRLEQFTELVVSPKIRPGIG
NLSGSPGRTSEEQHFHRQQNMDHSTRAGPSPIPQNHQWGGIADLKSLLRYMIKGTCGPVN
ELQPVPDIPALFTDSMYRVCAAPPASLCTISHVATGVIHLFPLSHKSNAGLTGGQAPVTY
GLLLKVPSPKEQRDRAKQAMEKKKNTGVTKAAATADGGEGVKEEEAAVVRVVWHGTGEER
HLRKGEIHSGRVWIPQPLATRLDIIPHSTVRIKPVKSTVKVASSIRLQPLKPLPEEEEEE
EEEIQTAFLGWLHTQSHEPLACLTPRTGNILLHGTDAKLELALTVLKPEAESDPPDQLFL
LSPAVIGKEHLQLDREPVATPAVTSVAETPKPDLPSLSILGGMDELSRTGFQFISHSLLG
SPLSRELGTAGRGLQGGSLLITGAKGSGKSTLSRALCGKAREHLDAHVEVVDCKKLQGKR
AETVRQMLQDVFEQAEWRQPSVVLLDDLDHVTGTPSSPEHEHGPEAVLQQHIAQSLKDVV
DELVLHSSLVCLIITSQSEHSLHPSLTEVQGSHFIQGLVHIQPPDQAQRAEILQRLILRK
NSLAEETLQTLDLAAVAKETEGYMPQDLVLLLERAVHASTVQQRHSDQGVCLSSRDFVQA
LKGFTPPSLWGADLHSPSGVGLERVGGLREVRQQLMDTIMLPAKYPILFANLPIRHRSGI
LLYGAPGTGKTLLARAVAKDSGMHFISIKGPELLSKYIGASEQGVRDVFQRAQAAKPCIL
FFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPG
RLDKSLYCPPPDLEARVEILKALSSGITLAADVDLEQLAAATEQFTGADLKALLYNAQLE
AVHNSLGSGTPHELTSGSESDMSLSSMIFPNNCSGSDDSVGEGEAVAGLDQSMVLLEPSE
LKVEDEHLGNVWRLYFGSSYESESGNSPISGLISQCASGPNSGNHDFSRASVRDPGGLIP
PAYMSSLRSGYEELGPEQLERLQQDVNNIKNNCRRGNEDCARVRSASSQPGLLLCSAHVN
SALAATKPSLSKADWNRYTKLYEAFGGAGDGKSPQSVTFKPGQRVTLA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtaatcagggcattcaacccgtaactgttgtttttaacaacacaaaaaactgc
tttcttcacctctcctcgaagttagcgttgcatctttccttgaacgagaatcaggctttg
gagttgtcatgggaccacggatctccagttttcctcagctggactcacaacaggacctcc
tccagcctggacagccataaagtggagctatgtcgacaactgggagaaaagctaggcctg
agagatggagagcagggtttcctgagaccatgtcaccaggtttcatcagtgcgtcaagtg
tttgtggagcctttgtcagctgatgattgggaaatcttggagctccacagtgccgcactg
gagcagcagctgctggatcaaatcagagtggttttccaagatgctgtgtttcctgtgtgg
gtggacagccacacagccatctacatccaaatagcatcactttcaccatccgtgccctac
ggtcgcctggagcagttcacagaactagttgtctctccaaagatccgccctggaattggc
aacctcagtggttctccagggagaaccagcgaggagcagcattttcacagacagcaaaat
atggatcattccacccgcgcaggaccatcccccattcctcaaaaccaccagtggggtggt
atagctgacctgaagagcctactacgctatatgattaagggtacctgtggtccagttaac
gagctccagcctgtacccgacatccccgccctcttcacagactccatgtacagagtgtgt
gctgcacctccagcctctctttgcactataagccacgtcgcaaccggcgtcattcactta
ttccctctgagccataagtcaaatgctgggcttactggaggtcaggccccagtgacttat
ggcctgctcttgaaggtgccctcgcctaaagagcagagggacagagccaagcaggccatg
gagaaaaagaagaacacaggagttactaaagctgctgccacagcggatggaggagagggg
gtaaaagaagaagaagctgcggtggtcagggtggtgtggcatggtactggggaggaaaga
catctcagaaagggagagatccatagtggaagagtgtggatcccacagccccttgccacg
aggttggatatcatcccacattcaaccgttagaattaaaccagtcaaatcgactgtcaaa
gtcgcctcctctattcgcctacagcccctaaagccactgcctgaggaggaggaggaggag
gaggaggagattcagacagctttccttggttggctccacactcagagtcatgaaccttta
gcctgtctcactccacggactggcaacatcctcctacatggaactgatgcaaagttagag
ttggctttgactgtgctgaaaccagaagcagagagtgaccctccagaccagctgttttta
ttatcacccgcggttatcgggaaggaacacctacagttagacagagagccagtggccacg
ccggctgtgacatctgtagctgaaacacccaaaccagatcttccctccctcagtattctt
ggtgggatggatgagctcagtaggactgggttccagttcatctcccacagccttctgggt
agtcccctctcacgagagcttggcaccgctggacggggtctccaaggtggcagtctactc
atcactggtgctaagggaagtggaaagagtaccttgtcccgagccctctgtggaaaagct
agagaacatctggatgcacatgtggaggtggtggactgcaaaaaactacaaggcaaacgg
gcagaaaccgtgagacagatgctgcaggacgtttttgagcaggcggagtggaggcagcct
tctgttgttctgcttgatgacttggaccatgtgacaggaacgccatcctcacctgaacat
gagcatggtcctgaggcggtgctgcagcagcacattgcacagagtctgaaggatgtggtg
gacgagctggtgcttcactccagcctggtgtgtctgatcatcaccagccagagtgagcat
tccctccacccctccctgacagaggtgcaggggtcccacttcatccagggcttggtgcac
atccagccaccagaccaggctcagagagcagaaatcctgcagcgtctgatcctcagaaaa
aacagcctagcagaggagaccttacagactctagacctagccgctgttgccaaggagacg
gagggatacatgccccaagacctggtactgctgttggaacgggccgtccacgccagcact
gtgcaacaaagacacagtgaccagggtgtgtgtctgtcgtcgagggacttcgtgcaggct
ctcaagggattcacacctccctctttgtggggtgctgacctccacagcccaagtggagtt
gggctggagagggtgggcgggctgagggaggtgcgacagcagctaatggacaccataatg
ctccctgctaagtatcccatcctgttcgccaatcttcctatccgccatcgctcaggaata
ttgctgtatggagctcctggtacagggaagaccctgctggccagagctgtggccaaagac
agtggtatgcacttcatcagcatcaagggacctgaactcctcagtaagtacattggggcg
agtgagcagggagtccgtgatgtcttccaaagggcacaagctgccaagccgtgcatcttg
ttcttcgatgagttcgactctctggcccccaggaggggccacgacagcacaggtgtcacc
gaccgtgtggtcaaccagctcctcacccagctggatggggtggagggactgcagggtgtt
tatgtgctcgcggccaccagccgtccagatctgattgatccggccctgctgagacctgga
agactggacaaatccctgtactgcccccctcctgacctggaggctcgtgtggagatcctg
aaggctctgagcagcggcatcaccctcgctgccgatgtcgacctggagcagctggctgca
gcgacggagcagttcaccggggctgacctgaaggccctgctatacaacgcccagctggag
gcagtccacaacagcctgggctccggcacaccgcatgagctgacctctggctcagaaagc
gacatgagcctgtcctccatgatcttcccgaacaactgcagtggctcggatgattcagtg
ggggagggagaagcggttgcggggctggatcagtccatggttctcctggagcccagcgag
cttaaagtggaagacgaacatcttgggaacgtctggagactctacttcggaagctcctac
gagtcggaatcagggaactcgccgatttctggactgatctcccagtgcgcctctggaccc
aactccgggaaccatgacttttcaagggcgtcggtccgtgaccccgggggcttgatccca
cctgcatacatgtcgtccctccggagcgggtacgaagagctcggccccgagcagctggag
cgtctacagcaagacgttaataacatcaagaacaactgcaggagagggaacgaggactgt
gcgcgggtgcgttcagcctcgagccagccgggcctcctgctgtgttcggctcatgtgaac
tctgccctggccgcgaccaagccgtctctcagcaaagccgactggaacagatacacaaaa
ctgtatgaagcgtttggcggtgcgggggacggaaaatctcctcagtctgtcacttttaaa
cctgggcaacgagtgactttagcttga
DBGET
integrated database retrieval system
