Acanthopagrus latus (yellowfin seabream): 119017150
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Entry
119017150 CDS
T08233
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119017150 (vps52)
Membrane trafficking [BR:
alat04131
]
Protein recycling
Others
EARP complex
119017150 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
119017150 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF5740
MscS_porin
CoV_NSP7
Rubis-subs-bind
COG6_N
Motif
Other DBs
NCBI-GeneID:
119017150
NCBI-ProteinID:
XP_036949504
LinkDB
All DBs
Position
3:1182977..1192881
Genome browser
AA seq
724 aa
AA seq
DB search
MADVAAAAVGAGSDVNTAGNPTEVAMAYLQDEKTDGDMTNLNLGELDLTTDEFILDEVDI
HIQANLEDDLVKEALKTGVDLRQYSKQVESELQRIEQASIKDYIKESQNIASLHNQITAC
DSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVDELVVPG
AMISTILDSPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLKAVSKIR
EFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYYSY
FKSYSSRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAILSPAEL
EGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREYLFLSDFFMVAGNSALDLFNSIM
GKTLSMFLKSMSTYVSDCYDSIAIFLCIHIILRFRAITAKRTIPALDKYWEAVLELLWPR
FEMILEMNIHSIRNTDPQKLGLLDTRPHYITRRYAEFSSAIVSINQTFPNERTHTLLGQL
QVEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLLARTQE
FIEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNEEARITQLVRGFSSTWKQSVESMSQD
VMRSFTNFKNGTSIIQGALTQLIQYYHGFHKILNQPTFRSLAVRSELINLHHLMVEVKKH
KPNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagctgcagccgctgttggagctggttccgatgtaaacacagctggaaac
ccgacagaagtcgccatggcgtatttacaagacgagaagactgatggagacatgaccaat
ctaaacctgggagagctggacctcaccaccgatgagttcatcttggatgaagtggacatt
catatccaggccaatctggaagatgacctcgtgaaggaggcgctcaaaacgggggttgac
ctccgtcagtactccaaacaggtggagtcagagttgcagaggatcgagcaggcctccatc
aaagactacatcaaggagagtcagaacatcgcttcgctgcacaaccagatcaccgcctgt
gactccatactggagcggatggagggcatgctgagcggcttccagagcgacctgtcctcc
atcagcagtgagatccagacactgcagcagcagtcggtcagcatgaatgtgaggctgaag
aacaggcaggcagtgcgcagccacctcagtcagctggtggacgagctggtggtgcccggc
gccatgatctccaccatcctggacagtccggtgacggagcaggagtttctggagcagctc
cacgaactcaacaacaagatcaacttcgccaaagagctgagcttcagagagacgctggcc
tgctctgacatccaggacatcgttgaccgcctcaaactcaaggcggtgtcaaagatccga
gagttcattcttcagaagatttactccttcaggaagccaatgaccaactaccagatccct
cagaacactctgcttaagtacagatttttctatcagttccttttggccaatgagaggacg
gtcgccaaggagatcagagatgagtacgtcgacaccatgagcaagatttactacagttac
ttcaagtcgtacagcagcaggctgctcaaagtgcagtatgaggaggttgcagacaaagac
gacctgatgggagtagaagacacggccaagaaaggtttcttctccaaaccgtctctgaag
agcaggaacaccatcttcactttgggccagaggggcgctatcctgagccccgccgagctg
gaggggcccatcctggtcccgcacacggcccagagaggagacagccggtatccatatgag
acgttgtttcgcagtcagcactacgctctgctggacaatggctgcagagagtacctcttc
ctctcagacttcttcatggtggcaggaaactcggcgctagacctctttaacagcatcatg
gggaaaactctcagcatgttcctgaagagcatgtccacgtacgtgtccgactgctacgac
agcatcgccatcttcctgtgcatccacatcatcctccggttcagagccatcaccgccaag
aggacgatccccgccctcgacaagtactgggaggcagtgctggagctgctgtggccgagg
tttgaaatgattctggagatgaacatccacagcatcagaaacacagaccctcagaaactg
ggattgcttgacaccagaccacactacatcacgcgtcgttacgcagagttctcgtccgcc
atcgtcagcatcaaccagacatttcccaacgagaggacacacactctgctgggacagctg
caggttgaggtagaaaactttgttctgaagatggcagcagagtttccctccagaagagat
cagctcatcttcctcattaacaactacgacatgatgctgagcgtcctcatggagagggca
gcagacgacagcaaagaagtggaaggtttccagcagttgctcttggcgaggacgcaggag
ttcatcgaagagattctgtctcctccctttggagggatgattgcctttgtgaaggaggcc
gaggcgttgatggagaaagggcagctcgaccggctgaagaacgaggaagctcgtatcact
cagctggttcgagggttttccagcacgtggaaacagtcggtggagtcgatgagtcaggac
gtcatgaggtcctttaccaacttcaaaaatggaaccagcatcatacagggcgctctgacc
cagctgatccagtactaccacggcttccacaagatcctgaaccagccgacgttccgcagc
ctggccgtccgctctgagctcatcaacctgcaccacctgatggtggaggtgaagaagcac
aagccaaacttctaa
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