Acanthopagrus latus (yellowfin seabream): 119017227
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Entry
119017227 CDS
T08233
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119017227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119017227
Transporters [BR:
alat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119017227
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119017227
NCBI-ProteinID:
XP_036949651
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Position
3:16369856..16390471
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AA seq
584 aa
AA seq
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MEKKDENREQWRKKREYILAAAGNVVGIGNVWRFPYLCYKNGGGAFLLPYCIFALLCGVP
LFLMETVIGQCTQEGSATCWTKLCPLAQGTGFSIIMIQLYSRLYSIVLAWAFLYLIYCFR
DPLPWATCSNPWNTDRCVELTSANRTAVDSGNQTVNWTSDKSSVSEFWERGVLSMSRGIE
EVGRVQWELLLCLLASWVVCYFCIWKGVRSTGKVVYFTAVFPYVTLAILLVRGLTLPGAL
QGVIYYLYPDPSRLADLQVWLEACAQVLFSYGVASGSIITLGSYNKVKNNCYRDSLWLCV
LNSCTSFVAGFAVFSSLGFMAHEQGMPINMVVKSGPGLAFIAFPQAVAMMPVPQLWAACF
FIMLFLLGLDTVFAGLETLTSSVIDMFPGQMRRPWRREIFLIFFCAFCFLIQIPLTTQGG
VYLFQLFDYYGANGACILFVCLVECVAVGWAFGADRMCDMVEDMTGQRPWLIFKLCWRYI
TPLICTACFICSFLDYQPLTSSGGYVYPDWAYRLGWVMALSSVVPVPIWAVVKICLTEGT
LRQRLAVLWHPVKHPVIPKSIEEQSLNETEMNSGVSTSNIQCCS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaagatgaaaacagggaacagtggaggaagaaaagggaatatattctggca
gcagcaggcaacgtggtaggcattggcaacgtgtggagattcccctacctgtgctataaa
aacggaggaggtgccttcctgttaccctactgtatcttcgccttgctatgtggcgtgcca
ctcttcctgatggagactgtgattggtcagtgcacgcaggaaggctccgctacctgttgg
acaaagctctgcccactggcacaggggacaggcttttctatcataatgatccagctgtat
tccagactgtacagcattgttctggcctgggcattcctatacctcatctactgttttaga
gaccctctaccctgggcaacctgcagcaatccatggaacacagacagatgtgtggagctc
acctctgcaaacaggactgcagtagacagtggcaatcagacagtaaactggacgtcagac
aagtcttcagtttctgagttctgggagagaggagtgctatccatgtcaaggggaatagag
gaggttggtagggtacagtgggagctactgctgtgtctccttgccagctgggtggtctgc
tacttctgcatctggaaaggggtccgctctacaggaaaggtggtgtatttcacagctgtg
ttcccctatgtgacgctggccatcctgctggttaggggattgaccctgccaggagccttg
cagggtgtcatctactatttgtatccagatccttcccgtctggcagaccttcaggtgtgg
ctggaggcttgtgctcaggtattattttcatatggtgttgcatcaggaagcataatcaca
ttgggaagctacaacaaagtcaaaaacaactgttacagggacagtctgtggttgtgtgtg
ctcaacagttgcaccagctttgttgcaggcttcgcagtcttctcatctctgggcttcatg
gcccacgaacaggggatgcccatcaacatggtggtcaaatcaggtcccgggctggctttc
atcgcttttccacaagctgtagccatgatgcctgttcctcagctgtgggctgcttgtttc
ttcatcatgctctttctgttgggacttgacacagtgtttgcaggtttagaaactctgaca
tcgtcagtgattgacatgttcccaggacagatgcgtagaccctggcgcagagaaatcttc
ctcatcttcttctgcgctttctgcttcctcattcagatcccactcaccactcagggagga
gtgtacctgttccagctgtttgactactatggtgctaacggagcatgtatcttatttgtg
tgcctggttgagtgtgttgctgttggctgggcctttggggctgaccggatgtgtgatatg
gttgaagatatgacaggacagagaccgtggcttattttcaaactgtgctggcgttacatc
acccctctgatctgtacggcttgcttcatctgctcatttctggactatcaacctctaaca
tccagtgggggctatgtgtacccagactgggcctacagactaggctgggtcatggcccta
tcatctgtggttccagtacccatctgggctgttgtcaagatctgtctcactgagggcacc
ctcaggcagcgactggcggtcctgtggcatcctgttaaacatcctgtcattcccaagagt
atcgaagaacagtccctaaatgaaacagagatgaactcaggggtgtcaacttccaatatc
cagtgctgtagttga
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