Acanthopagrus latus (yellowfin seabream): 119017524
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Entry
119017524 CDS
T08233
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119017524 (sox6)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119017524 (sox6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119017524
NCBI-ProteinID:
XP_036950123
EnsemblRapid:
ENSALTG00010005854
LinkDB
All DBs
Position
4:19932603..20067106
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AA seq
800 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEESAEAHGTPQLPLHSL
LHGKAHPDEMQPLSSVPPESDWDSLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDDSSCMEKLLSKDWKEKME
RLNTSELLAEVKGTPESLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQ
QGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPP
LPQPLNTSGPISPSSLKNDKSSSSPITQVKEEGTQPLNLSARPKTTDMVKSPTSPTQNLF
LGSKSSPNSLLSKGGIPSPLGGGLGRGSSLDILSSLNSTALFGDQDTVMKAIQEARKMRE
QIQREQLQHHQQGMEAKLSALSSVGLNNCRVDKERAHFESLGHHLGKLGEEGKIGHRVID
LTRPEDLDGSKEINGSADKPQPYYCWPTGGTGSTEARVFREARGRNNNEPHIKRPMNAFM
VWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQDKQPYYEEQARLSKLHLEKYPNYK
YKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQPPQLPITTSASMVYPGAITM
ATTTPSPQMTSECSSASASPEPSIPVIQSTYNMKLEPSTMANNSEPVNGEDEMDMYEDFE
DEPKSDYSSENDTQEPVSAN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtcatgtcttccaagcaagcc
acgtctcctttcgcctctgtagtcgatggggatgatgccatgagtcaggagcacttgtct
tgggagaaagaggagagcgccgaggcccacggcacgccacagctgcccctgcacagtctg
ctccatggaaaagcccatcccgatgaaatgcagccgctcagtagtgtaccgccggagagc
gactgggacagcctggtgtcagcccaacagcgcatggaatctgacagcaataaagtatgt
tccctgtactccttccggaacaattccacttccccacacaagccggaggagggggcccgg
gagcgaagcgacctgctgagcggatcagcgtttggaactccggagcgccgcaaaggaagc
ctggcagacgtagtggacacactgaagcagaagaagctggaggagatgacaaagacagag
caagacgattcatcatgcatggagaaacttctttctaaagactggaaagagaagatggag
aggctcaacaccagtgaactgctggcagaagtcaaaggtactccggagagcctggcagaa
aaggagcaccagctctccacaatgatcacccagctgatcagcctgcgagagcagctcctg
gctgcccacgacgaacagaagaagctcgccgcctcacaaatggagaaacagaggcagcaa
atggagttagctcgtcagcagcaggagcagattgcaagacaacagcagcagcttctgcag
cagcagcacaaaatcaacctcctccaacagcagatccaggtccagggtcacatgcctccg
ctcatgatccccatttttccacacgaccaacgcactctggcagcagcagccgccgcccag
caaggctttctcttccctccgggaatgtcttataagccaggtgataactacccggtgcag
ttcattccatccaccatggcagctgcagcagcgtcaggactcagccccctccagcttcag
caactgtatgccgcccagcttgccagcatgcaggtctctcctggagccaagatgcctcca
ctgccccagcccctcaataccagtgggcccatctctccctcatcactgaagaatgacaag
agttcatccagccccatcactcaagtcaaggaggagggaacacagccgctcaacctgtct
gctcggccaaagacgacagatatggtcaaatccccgacatccccgacacaaaacctgttc
ctcggcagtaaaagcagccccaacagcctcctcagcaagggtggcatccccagcccactc
ggaggaggtctgggtcgtggctcgtctctggatattctgtccagcctaaactccactgcg
ctgttcggggaccaggacacggtgatgaaggccatccaggaggctcggaaaatgagggag
cagatccagagggaacaactgcaacatcaccagcagggcatggaggcgaagctgtccgcc
ctcagctcagtgggcctcaacaactgcagagttgacaaggagagggcgcactttgagagc
ctcgggcaccacctcggcaagctgggtgaggaaggaaagatcggccacagagttattgac
ctgaccaggcctgaggacctagatgggtccaaggaaataaatggctctgcagataaaccc
caaccctattattgttggccaacaggaggcactggatctacagaggcacgagtcttcagg
gaagcccgaggaaggaacaacaacgagccccacattaaaaggccaatgaacgcattcatg
gtgtgggccaaggacgagcggcgcaagatcctccaggccttccctgacatgcacaactcc
aacataagcaagattttgggttcacggtggaagtctatgtcaaaccaggacaagcagcca
tactacgaggaacaggcccgcctgagtaagctccacctagagaagtacccaaactacaaa
tacaagcctcggcccaagaggacctgcatcatcgatggaaaaaaactccgcattggcgag
tacaagcagatgatgcgctcacggcgacaagagatgaggcagttcttcactgtcgggcag
ccgccacagcttcccatcaccaccagcgccagtatggtctaccctggggccatcaccatg
gcgaccacaacaccctcacctcagatgacatccgagtgctcgagtgcctcagcgagtccg
gagccatccattcccgtcatccagagcacctacaacatgaagctagagcccagcaccatg
gcgaacaacagcgagccggtcaacggtgaggacgagatggacatgtacgaggattttgag
gacgagcccaaatcagactatagtagtgaaaatgacacacaagagccggtcagcgccaac
taa
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