Acanthopagrus latus (yellowfin seabream): 119017526
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Entry
119017526 CDS
T08233
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119017526
03037 Cilium and associated proteins [BR:
alat03037
]
119017526
Transporters [BR:
alat02000
]
Other transporters
Pores ion channels [TC:
1
]
119017526
Cilium and associated proteins [BR:
alat03037
]
Other cilia and associated proteins
Stereociliary proteins
119017526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
119017526
NCBI-ProteinID:
XP_036950126
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All DBs
Position
4:64801..98346
Genome browser
AA seq
1181 aa
AA seq
DB search
MNPVKKTHGASMSTVSEPLAGSCRSLSAAKRHKSIRKNSRRIYSAYQHHQQGSSDDEDKE
DERVDSNDPEEMFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGY
QTAGADLVKKLSRVLYNIVVLFVPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIM
TGAFIVLPELLAGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRK
IGSAGYRLPLAYFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYL
IGNPEAAESKGAAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIY
FVVDRSQKLEQEKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLAR
VLVLYLGNLYSLIIALLDKVNSMSSAIPVNPGNWSDSSSFLATISQPDVDSLSTLVSNIS
VSEHRNTTIATIPMVMNITRSGSGTISNQTALFEKNTRSQQDQCWETYVGQEMLKLSIID
MIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGA
FFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPT
IFAIVRYRPSQHCGPFSGQEKIYDIISETVASDFPLWFSKVMSYVTSPVVVLPALLLLFM
LIYYLQAIARSLKFTNNQLRMQLQTERTDDKKKVLQMAAARLQAPEAAADKKPDQQESDI
TSQDTSIHTPSPRQNGSVTNFQSPNRRGNSIRTITQSASRADLNRGSVAGSVRSPAVTML
PKHRLEHVPNRPPPFLGGPSGTCRSKSYHHMAYNHPARYSDNIHSDPLCRKTVRSLHPVE
AAGIITAQSYGGRRGHTTRYVIVNEHEPRKKLLRSATRIPRHYLMEESAEILELYPRNIK
RYTPRTTHHQPHPHRSHPSQQHLSEEEEEEEEGKGRRRTSLGKAHRPRSLSDLHQPAHFY
IGERVESHVSMAKDGRTARGRRGAPEEDEEEDCEGEMDWEDLEAHSRFQATADPLLVRTR
RHIHSPGRHYQSPARVRHMESHVKPKTRPKLETPVTESDSASLASSSDQQNSSTDQYIQV
IHNKERYLKSDARQGKLPKKRSKPCFDLNVTESNDLVSSNV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtcaagaagacacacggagccagcatgagtacagtatctgagcctttggct
ggcagctgcaggtctctgtctgcagccaagagacacaaaagtatcaggaagaactccaga
aggatttattcagcctaccagcaccaccagcagggctcctctgatgatgaggacaaagag
gatgagcgggtggacagcaatgacccagaagagatgttccagaacattcagtaccagaaa
gagatcattgccaacattcggaccagaccgtggccaatgagacgcaagcttaaagtccta
aagcaggccagagagattgttctgaagtatgagggccgactgaccagaaccagaggatac
cagactgcaggagctgaccttgtgaagaaactttcccgtgtgctttacaacatcgtggtt
ctgttcgtcccctgggaagtgaggatcaagaaaatcgaaagtcactttgggtcaggcgtg
gcgtcctacttcatcttcctccgctggttgtttgggatcaacattgtcctgaccatcatg
actggagccttcatcgtcctgccagagctgctggcgggagctccgtttggaacaacgaga
agtaaaactatccccaaggagcatctggcttcagcccaggacttggacaccatctggtct
cttgggggctacctgcagtactctgtgttattctatggttattatggcagggtgaggaaa
attggcagtgcagggtaccggctgcccctcgcctacttcctggttgggatggctgtcttt
gcctacagtttcatcattttgttaagaaaaatggctaagaactctcgtctgagtctggcc
agcgcctctgatgagaacttcacgttctgctggagggtgttctgtgcctgggactacctg
atcggaaaccccgaggctgcagagagcaaaggagcggccatcgtcaacaacatcagggag
gctattgtggaggagcaggagaagaagaaggacaccagtctggcagttctgatcagtctg
cgtattttagctaacatcctggtgctgctgtctctggctggcagcatctacatcatctac
tttgtggtggaccgctctcagaaactagagcaggagaagccggagctgacgctgtgggag
aagaatgaggttagtgtggtggtctctctcatcaccatgatcgctccgtctgccttcgag
ctggtggctcagctggagatgtaccacccgcgaacctcactacgcttccagctggccagg
gtgcttgttttatacctggggaatctctacagcctcattattgccctccttgataaggtc
aacagtatgagctctgctatcccagtgaatccagggaactggtctgactccagctccttc
ctggccaccatctctcagccggatgtagacagtctctccaccctggtgtccaacatctcc
gtctctgagcatcgcaacactaccatagcgaccatccccatggtcatgaacattaccagg
agcggctcagggaccatctccaaccagacagctctgtttgaaaagaacacccgctctcag
caggaccagtgctgggagacctacgttggccaggagatgctgaagctgtccatcatcgac
atgatcttcacagtggccagcatcctgctcattgacttcatcagaggactggtggttcgc
tacctgagtgactgttgctgctgggatttagagagcaagtttcctgaatatggagaattt
aagatagcagagaacgtcctgcatctgatttataaccaaggaatgatctggatgggagca
tttttctctccctgtcttcctgccttcaacgtgttgaagctgattggtttgatgtatctg
agaagctgggccgtcctcacctgtaatgttccccatcagcaggtgttcagagcctccaga
tcaaacaatttctacttggctatgctgcttttcatgctcttcctgtgtatgctgcccacc
atctttgccatagtgaggtacagaccgtcacagcactgtggcccattcagtggccaagag
aagatttatgacatcatctctgagacggtggccagtgatttccctctgtggttcagcaaa
gtgatgagttatgttaccagccctgtggtggtgctgccagcactgctgctactgttcatg
ctgatatattacctccaggccattgccagatcactcaaattcactaacaaccagctgagg
atgcagctccagactgagcgcactgatgacaagaagaaagtcttacaaatggctgcagct
agactgcaggctccagaggctgcagcagacaagaagccagatcagcaggagagtgacatc
acaagccaggacacctccatccacactccatcgccccgacagaacggcagtgtcacaaac
tttcagtctcctaatcgccgtggaaacagcatccgcaccatcacccaatcagcgtccagg
gcagacctgaacagaggaagtgttgctggatctgtcaggagcccagcagtgaccatgctg
cccaaacacaggctggagcacgtacctaacaggcctccaccatttcttggtggtcctagt
ggtacctgcaggtccaagtcctaccaccacatggcatacaatcacccagctcgctattct
gacaacatccactctgaccccctgtgcaggaagaccgtacgctccttacatcctgttgaa
gccgcagggatcatcactgcacagagttatggaggacgacgcggtcacaccacccgctat
gtgattgtcaacgagcacgagcccaggaagaagctgttgcgctcagctacacggatccca
cggcattacctcatggaagagtctgcagagatcctggagctgtacccgcgcaacatcaaa
cgctacacaccccgcacaactcatcaccaaccgcatcctcaccggtcccacccttcacag
cagcacctgagtgaagaggaagaggaggaggaagagggaaaaggcaggagaaggacgtcc
ttggggaaggcacatcggccccgttcgctgtctgacctccaccagccagcacacttctac
attggtgagcgtgtggagagccacgtgtccatggccaaagatggccgcactgctcgagga
agacgtggagcaccagaagaggatgaagaggaggattgtgaaggtgaaatggactgggaa
gacttggaggcacactcccggttccaggccacagcagaccctcttcttgtgcgaaccagg
cgtcatatccattcaccaggtagacactatcagtcgccggccagggtcaggcacatggag
tctcatgtgaagcccaagacgagacctaaactggagacccctgtgactgagtctgactca
gcctccctggcctcgagcagtgaccagcagaacagcagcactgaccagtacattcaggtc
atccacaacaaggagcgctacctcaagtctgatgccaggcaaggaaagctgcccaaaaag
aggtccaaaccctgctttgatctaaatgttacagagtcaaatgatctggtttcttccaat
gtttga
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