Acanthopagrus latus (yellowfin seabream): 119017527
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Entry
119017527 CDS
T08233
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119017527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119017527
Cell adhesion molecules [BR:
alat04515
]
Immunoglobulin superfamily
NGL family
119017527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
119017527
NCBI-ProteinID:
XP_036950130
LinkDB
All DBs
Position
4:complement(12673600..12717131)
Genome browser
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQISVIKPSAF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKEAVPANTSCCARCHTPTVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVLDRDGEEALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
ggactggttcgtgctcagacctgtccctccgtctgctcatgcagtaaccagttcagcaaa
gtcatatgcacccgccgcagtctacgagacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcattcaggtcatcaaggtggacagtttcaaacacctg
cgccatctggagatcctgcagctgagcaagaaccacatccgcagcattgaaattggcgcc
ttcaatgggctggccagtctcaacaccttggagctctttgataatcggctcacgacaatc
cccaatggagcatttgagtacttgtcaaagctgaaagaattgtggctacggaacaacccc
atcgaaagtataccatcgtatgccttcaaccgggtcccctcgcttcgaaggctggatcta
ggcgagctcaagcgtctctcctacatttctgacggagccttcaaggacttgagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagatccccaacatcttacctttggtc
aggctcgaagagcttgaaatgtcaggaaaccagatctctgttatcaaacccagcgcattt
acaggattagtcaacctccagaagctgtggatgatgcatgcccagatccagacgatcgag
aggaattcttttgatgaccttcagtcactggtggagctcaacttggctcacaacaacctt
acctttctaccacatgacctcttcacaccattgcatcgtctggagcgggtccatctccat
cacaacccttggaactgcaactgtgatatcttgtggctcagctggtggctgaaggaggca
gtgcctgccaataccagctgctgcgcccgctgccatacccctacagtctttaaaggtcgc
tacatcggggaattggaccacagctacttccagtgtgatgttcctgtcattgtggagcca
cccagcgacttaaatgtgacagaaggcatgggtgcagagcttaaatgtcgtacaagctcg
ctgacatccatcagctggcttacaccaaacggctcgttggtgacacatggggcttataag
gtgcgtttgtctgttctcaatgatgggacactgaactttacgagcgtcacaatgcaggac
actgggacttacacctgtatggttagcaacacagcaggcaacatttctgcctccgctgtg
cttaatgtcacctctgtggaaaacagcggggtgacctattttaccacagtcaccgtggag
accattgagaccccgggggatgacagccaaacaccacttccaccattcggctgggtttca
tcctcaacgacaaaaggtactcctgtatctacaaggaccacagagcggacttacaccatt
ccagtcctcgatcgggacggagaggaagccctcaacggcctggatgaggtgatgaaaact
accaagatcatcatcggctgctttgtggccatcactcttatggctgctgttctgctggtt
attttctacaagatgaggaagcagcataatcagcaggatcctgatggccctgcctcctcc
atggaggtcattaccgtggaagaagagctagctggtgttgctgccatggagagacacctt
tctctgccccctctggagcactacaaccactacaacacctacaagagcacttaccaccac
ccaccaatgctcagtaccatacacagctcagccacacaggaacctttactgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctga
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