Acanthopagrus latus (yellowfin seabream): 119017601
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Entry
119017601 CDS
T08233
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119017601 (chd9)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119017601 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
119017601
NCBI-ProteinID:
XP_036950243
LinkDB
All DBs
Position
4:30920611..30990650
Genome browser
AA seq
3020 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFASAPSLVDELNLSADFEPLQVEPLGSGKHQDMMPPVSS
QQTMPTYSEQMGHYIGMKAQNPMAQAFPGPGGTGGGGSGLIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNEDQNGNMYHPLSQQQQHQQQQLCHQQQLHNQQIHVRQQPTQQQQHHP
CHQQQEQQHRMRQQQQQLQQQQSHQQQLLNQRQHQQINTQTMSLQQQHHHNFSFHQGGQS
QSQQQIHHTQQQVQHQLAVGGQRFHSRALPSKSYLDSQNASLSGTCLQPQQQQGSYQLTR
SGQAFSGSGPEDPNLPFPMHPSSMVHSLPTCSAAAYQPAQYPAYPGEPEIPTLSQQPLSS
ASVSRPTTTAAPLTPTVPELPGTVCQFPSAAVMSQKHTRAPVSQADECPFRALRCSGEAQ
GNCKSSEIFGESMRCFPNMASQLPSEQPQNCGAINTNGFEALGDDLLPSDAQDGDLEGLE
PPDLLPDLLPQLEAALSQEDNSNCSWGESSQERGHEPRKSPPVEFKEEKPRKNANGPGSQ
VRVLSPAMKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMESNIQDKQEKANRIISEAI
AKARQRGEKNIPRVMSPESFPSSSSQHKSHRDREHKGNGKARFKEKACRKACIVPSSKPK
QKAKIGKIVIKIGKKKKRKPESSEESDDDPPPRHSSKDVDSKRRSNRQVKRKKYAEELEA
RLSDDEVKVIVKTKKTNTAASKQPALQLFVENPSEEDAAVVDKIMSSHVVKKEVSPGVVI
EVEEFFVKYKNYSYLHCEWATEQQLVKDKRIQQKIKRFKMKQAQRALLFADMEEEPFNPD
YVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVK
PDSRRMDRPPANLWKKRDQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGK
TIQSITFLEEIHRAGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQY
EMYFKDSQGRVIRGAYKFRAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLE
GFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSEHTFMQEFGDLKTEEQVQKLQ
GILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMP
NLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAMDFHLQAMVQSAGKLVLIDKLL
PKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPESER
FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNS
YEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAVQQQLSKKEIEDLLRRGAYGAI
MDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWD
KWAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESENDETKPKLRRN
HDRLNSYGRTECFRVEKNLLVYGWGRWNDILKHGRFKKQLTEWDVESICRALLSYCLVHY
RGDDKIKSFMWDLIAPTEDGQTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLR
KHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGADSSEIKIWVP
DPDHSELPALWWDAIADKCLLLGIYKHGYEKYNTIRADPTLCFIERVGRPDEKAIAAEQR
GNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAVPLTEGETIYWPSSSV
LTARLRRLITASQRFTKSRQILQIHQTQSQSQQTMVLSAPLCPLPATLNDTLNPKMAAKI
ERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTA
MCRRVCRLPPKEGDSAVDPSLNIQPITEERASRTLYRVELLRQVREQVLRHSLLYERLPL
CQMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKAAQQQ
SHTSTPLLHPQCQPSSSVLTGSPLPPPVQRDSEPSVVVPKVEPASEGEEGKEKPGETWSP
PQAPATPTGLEEKPVTEVKESEKQMVAARTKPLTPNSSERKPKKASKRSRREARRGSESD
SDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSDDSESEGEE
GKKKVPAVASVKAFDEDSVASLSTTQDETQDTHVAENGITNNSSHPFQGGGYMLAASYWP
KDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGS
KVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEQQYLVRLHELQSASDTGL
ADITKPQCSYQTVPQDLSGQMRLNGALDGQPVVKKRRGRRKNVEGMDLLFMNRNRVPAAP
DQQLPAGWGGIGQVGMAVAPAPGYSQSSSQIPGDTESRVPVINLKDGTRLAGDDAPRRKD
LEQWLREHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERV
QIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGP
IVPEEVSRRGRRPKNPLAKATAAAAAAAPNQAASALGLNPLLANGLLSGMDLTSLQAFQQ
NLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSLLGKPAQES
TGGSEEKKKVTGSGVAGEPSASKAPPHTSDTKGERTEGLNTIPSSTSSSASSATAPQSAS
AASAASSHQLSLNPLLLSSMLYPGMLLTPGLNLPVSAAQQQSSNSDPTLPADPPPPPPAL
SQSTTQETKRPAAEKDGEEDEEELEEALDEEEEEEEEEEEESAEQKENSGPEGSGKAESS
SSESGSSSSSSDDSDSSDED
NT seq
9063 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgatcccaacctctttgttgggggtttggaagggctggatgaggat
ggcttcgcttcagcaccatcacttgtggatgagctaaacctcagtgccgactttgagccg
ctccaagtggagcctcttggctcagggaagcaccaagacatgatgccgccagtttcttca
caacaaaccatgcctacttacagtgagcagatgggtcactacattggcatgaaggcacag
aatcctatggcacaggcatttcctggtcctgggggcacaggtggtggaggcagtggcttg
attgcagatcaacatggccagtaccacaatgctgccatgagccaagtacctcaatccaat
gggctgttctgtaacagtagcagtccaatgtggggcaacgaagaccagaatgggaatatg
taccaccccttatctcaacagcagcaacatcagcaacagcagctctgtcatcagcagcaa
ctgcacaaccagcaaattcatgtcagacaacaaccaacacagcagcaacaacaccacccg
tgtcatcaacaacaggaacagcagcacagaatgcggcagcagcagcagcagctgcaacaa
cagcaaagtcatcagcagcagctgttaaaccagcgacagcaccaacaaattaacacacag
acaatgtccctgcagcaacagcaccatcacaatttctcctttcaccagggtggtcaatct
cagagccaacagcagattcaccatacgcagcagcaggtccagcaccaacttgctgtcgga
gggcaaaggttccattcaagggctcttccaagtaagtcttatttggatagtcaaaatgct
tctctgagtggtacttgcttgcaaccgcagcagcagcagggtagctatcagttgaccagg
agtggtcaagccttttctggatcgggacctgaagaccctaacctgcccttccccatgcat
ccgtcatctatggttcactccctgcccacatgctctgccgctgcttaccaaccggctcag
taccctgcctaccccggagagccagaaatacctactctcagtcagcagcctttgtcatca
gcctcagtgtctaggccaaccaccactgctgcacccctcactcccacagtgcctgagctc
ccagggacagtatgtcagtttccatcagcagctgttatgagtcaaaagcacaccagggcc
ccagtcagccaggcagatgagtgtcctttccgggccttgcgttgttcaggagaagcccag
ggaaactgcaagtcatctgagatatttggggaatctatgaggtgcttccccaacatggcc
agccagttgccctctgagcagcctcaaaactgcggggccatcaacactaatggattcgag
gcattgggagacgatctccttccatcagatgctcaggacggagacttggaaggcctggag
cctccggacctcttgcctgacctactgccccagctggaggctgctctcagccaagaggat
aactccaactgttcctggggcgagtccagtcaggagaggggacatgagcccaggaaatca
ccacctgttgaattcaaggaggagaagcctcgaaagaacgctaatggtcccggtagccag
gtacgggtcctcagtcccgcaatgaagagcagctcgtcgtcctcctcctcttcctcatcg
tcgtcatcctcatccagctcctcgtcagagaagagaacgccgcggaggacgcaccatcag
atggagtcaaacatacaggacaagcaggagaaggccaacaggataatatcagaggctatc
gctaaagcccgacagcgtggggagaagaacatccccagagttatgagccctgagagtttc
cccagctcctcctcgcagcacaagagccaccgcgaccgcgagcacaaaggaaatggcaaa
gcgcgattcaaagagaaggcttgtaggaaggcctgcatcgtaccctcctccaagcccaag
cagaaggccaagattgggaaaattgtcatcaagatcgggaagaagaagaagcgaaagccg
gagtcttcggaggagtcggatgatgaccctccccctcgacactcttctaaagacgtggac
tctaagaggcgatcaaatcgccaggtgaaaaggaagaagtacgctgaagagctggaggcc
aggttgtcggatgatgaagtcaaggttatcgtcaaaaccaagaaaaccaacactgcagca
tccaagcagcctgcgcttcaactctttgtagagaatcccagtgaagaggacgctgctgtt
gttgacaaaatcatgtcctctcatgtcgtcaagaaggaggtctctccaggagtggtgatt
gaagtggaggagtttttcgtaaaatacaaaaactactcgtacctacactgtgagtgggcc
acggagcagcagctggtgaaggacaagaggattcagcagaagatcaaacgtttcaagatg
aaacaagcacagagggcgctcctctttgcagatatggaagaggagccctttaaccccgac
tatgtagaggtagaccgagtgctggaggtgtcgtattgtgaggacaaagacacgggagag
gaggtggtgtactacctggtcaagtggtgctctctgccttacgaggatagcacctgggag
ctgaaggacgacgtggatcagagcaagattgaagagtttgagcagctgcaggcagtgaag
ccagactcgcgcaggatggatcggcccccggccaatctgtggaagaagagggatcagtcg
agggaatacaggaacggcaacagcctcagggactaccagctcgagggggtcaactggctc
ctcttcaactggtacaacagacgaaactgcatcctggcagacgagatgggcctggggaag
accatccagtccatcacgttcttagaggagatccaccgtgcgggcattaaagggccgttc
ctcatcatcgcccccctctccaccatcgccaactgggagcgcgagttccgcacctggacc
cacctcaacgtgatcgtctaccacgggagcatggtcagcaggcagatgctgcagcagtac
gagatgtatttcaaggattcgcagggccgcgtgatacgaggcgcctacaagttcagggcc
gtcatcacaacgttcgagatgatcctgggaggctgccccgaactcaacgccatcgagtgg
cgctgtgtcatcatcgacgaggcccaccgcctcaagaacaagaactgcaagctgctagag
ggcttcaagctcatgaacctggaacacaaggtcctgctgacaggtactcctctccagaac
acagtcgaagagctcttcagcctgctccacttcctggagccggcacgcttcccctcagaa
cacaccttcatgcaggagtttggagacctcaagactgaggagcaggtacaaaagcttcaa
ggtatcctgaagccgatgatgctacgtcggttgaaggaggacgtggagaagaagttggct
ccgaaagaggaaaccatcatcgaggtggagctcaccaacattcagaagaaatactaccgg
gccatcctcgagaagaacttctctttcctggctaaaggagccggccaggccaacatgccc
aacctggtcaacaccatgatggagctgcgaaagtgctgcaaccatccctacctcatcaaa
ggagcagaagagaagatcctcgaggacttcagggaggtgtacagccccactgccatggac
tttcacctgcaggctatggtacagtctgccgggaagctcgtccttatcgacaagctgctg
cctaagatgaaggccggagggcacaaggtgctcatcttctcccaaatggtgcgctgcctg
gacatcttggaagactacctcattcagagaaggtacttgtatgagcggatagatggacgt
gttcgtgggaacctgcggcaggcggccatcgaccgcttcagtaagcccgaatcggaacga
ttcgttttcctcctgtgtacgagagctggtggcctggggatcaacctcacagccgcagac
acctgcatcatctttgactctgactggaacccgcagaatgacctgcaggcccaggctcgc
tgccatcggatcggtcagaacaaggcagtgaaggtgtaccgcctgatcaccaggaactca
tacgagcgggagatgtttgatcgcgccagcctcaagctgggcctggacaaagccgtgctg
cagagcatgagtggccgagataacagcctgggaggaggcgccgggggaggggctgtgcag
cagcagctgtcgaagaaggagatcgaggatctgctgcgacgcggtgcgtatggggccata
atggacgaggaggacgaaggggccaaattctgcgaggaggacatcgaccagatcctccag
cgcaggacgaagaccatcaccattgagtctgagggacgaggatccacctttgcaaaggct
agttttgtggcatctggaaaccgcacagacatctctctggatgaccccaacttctgggac
aagtgggccaaaaaagcagacattgacatggaaatggtcaatggcagaaacagcttggtg
atcgacacacctcgtgtccgaaagcagacgaggccgttcagcgccactaaggatgagcta
gccgagctgtcggagggcgaaagcgagaatgacgagaccaaaccgaagctgaggcgaaac
cacgaccgcctcaacagctacggacgcacggagtgcttcagagtggagaagaacctgctc
gtttacggatggggtcgttggaacgatattctcaaacatgggcgttttaagaagcagctg
acggagtgggatgtggagtccatctgcagggccctgctgtcttactgcctggtccattac
cgtggagatgacaaaatcaagagcttcatgtgggacctgatcgcccctacggaggacgga
cagaccaaggagctgcagaatcacctggggctgtccgccccagtccctcggggcagaaag
ggtaagaagatgaaaacccagtcgagctctttcgacatccacaaagccgaatggctccgg
aaacacaacccagagcacatgcttcaggacgacggctacaagaaacacctcaaacaccac
tgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgatagga
agccaggcccagaaggtgctggacggcgcggactccagtgagataaagatctgggtgcca
gatcctgaccactcggagctgccagccttgtggtgggatgccatcgctgacaagtgtctg
ctgctgggcatctataagcacggttatgagaagtacaacacgattcgtgccgacccgacc
ttgtgcttcatagagcgcgtgggacgacccgatgagaaggccatcgccgctgaacagaga
ggcaatgatttcatggacggggatgtggacgatccagagtacaagcccgctccggccctg
ctgaaggacgacatggaggatgacgcctcttcccctggagacttggttgtcactgacaac
gccggagacgcagtaccactgacagaaggtgaaaccatctactggccctcgtcctcggtg
ctgacagcccggctgaggcgtctcatcacggcctcccagcgcttcactaagagccggcag
atcctccagatccaccagactcagtctcagtcccagcagaccatggtgctgtctgctcca
ctctgcccgctgcccgccacgctcaacgacaccctcaaccccaagatggctgctaagatt
gaacgccagcaaagatggacccggcgagaagaggctgacttttaccgcgtggtctccacc
tttggtgtcgtgtttgacccgaacctcggccgcttcgactggaccaagttcagggccatg
gctcggctgcacaagaagaccgacgagagcctgcagaagtacctgtgtgcatttaccgcc
atgtgccgaagggtgtgtcgcctgccacccaaagagggagactctgcggtggacccgtct
ctgaacatccagcccatcactgaggagcgagcgtctcgtacactgtacagagtagagttg
cttcgccaagtgagagagcaagtccttcgccattcgttgctctacgagcgcctgccgctg
tgccagatgagctctgacttgcccgtctggtgggaagccggtacccatgaccgcgacctg
ctaatcggagctgctaagcacggcgtcagccgcacagactaccacattctcagagacccc
gagctcagcttcatggctgcccagcgcaactacagccaaactaaagctgcacagcagcag
tcacacacatccaccccgcttctacaccctcagtgccagcccagcagctcagtattgaca
ggctctccactgcctccgcctgtccagagagactcggagcccagtgtggttgtacccaag
gtggaaccagcctcagagggggaggagggcaaggagaagcctggggagacatggagccct
cctcaagcaccagctactcccacaggtctggaggagaagcctgttactgaggtcaaggag
agcgagaagcagatggtggcagcacgaaccaaacctctcacacccaactcctctgagagg
aaacccaagaaggcgagcaagaggagccgcagggaggcccggcgtggctcagagtccgac
tcagacggctcctcctcgagctcttcatcgcgctcctcttcttcttcttcttcatcctct
tcttcctcgtcacattccggatccagctcctcctcctcgtcctcatcttgctcctctggc
tcttcgtcatcgtcgtcctcctcctcctcttcagatgacagcgaaagcgagggagaggaa
gggaagaagaaagtgcctgcggtggcgagtgtcaaggccttcgacgaggacagtgtggcg
tctctgagcacaacgcaggatgaaacgcaggacacccacgtggccgaaaacggcatcacc
aacaactcctcgcatcctttccagggaggagggtacatgctcgctgcatcctactggcca
aaggaccgtgtgatcatcaaccgcctggacagcatctgccaggcggtgctaaagggcaag
tggcccggaacacgtcgggtctacgagcccggaggcgcggtggcttccttctacaccacc
aagctgctggacaatgccaacagcctgtgcgaggacccctctgcctcgccacaggggtca
aaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactcaacgatcaggag
ggaggtctcaagctgaccttccagaaacaaggtctacctctgaagaggccgctggagtcg
gaggagcagcagtacctggtccggcttcacgagctgcagagcgcctcggacacgggcctg
gccgacatcaccaagcctcagtgcagctaccagaccgtgcctcaagatctctccggtcag
atgaggttgaatggagcactggacggtcagcctgtggtcaagaagcgaaggggacggagg
aagaacgtggaggggatggacctgttattcatgaacaggaatcgagtccctgctgctcct
gatcagcagctgcctgcaggttggggtggtattggtcaggtgggcatggctgtggcccct
gcaccgggctacagccagagctccagtcagatccccggggacacggagagcagggtcccc
gtcatcaacctcaaagatggcacccggctcgctggggacgacgctcccaggaggaaagat
ctggagcagtggctgagagagcacccaggcttcgtggcagacactggagcatttatccct
ggggtaaataagatgcaaatgcagttccacttccaggacggtcggcccaaacagaagcgg
caccgctgcagaaaccccaacaagatcgacgtgaacagcctcacaggagaggagagggtc
cagatcatcaacaggagaaatgcacgcaaggtcggtggagcctttgctcctcctctgaag
gatctgtgccggttccttcaggagaaccccgaatacggagtcccacctgaatgggccgat
gtcgtgaaacagtcgggttacctcccagagagcatgtttgacagaatcctgacgggaccc
atcgttcctgaggaggtgagccggcgtggacgtcggcctaagaatcctctggccaaggcg
acggcggcggcggcagcagcagcacctaaccaggccgcctccgccctgggtctgaacccc
ctgctggccaacggcctcctctctggtatggacctgaccagcctgcaggccttccagcaa
aacctccagagcttacagtccctgcagctcaccgcaggcctgatggggctcccatccgac
gctagcaacctggcagcaagtaacttagccgccatgtttcccatgatgctgtctggtatg
gctggattgccaaacctgctgggcatgagcagcttgctcgggaagcctgctcaggagagc
acaggaggctctgaggagaagaagaaggtaaccggcagcggtgtagcaggagagccatct
gcctctaaggccccccctcacacttcagacaccaaaggagaaaggacagagggcttgaac
acgattccttcctccacttccagctccgcttcctccgccaccgccccacaaagtgcttca
gctgcgtctgcagcctccagtcaccaactgtctcttaaccccttgttactctccagtatg
ctttacccagggatgcttctcactccaggccttaaccttcctgtgtctgccgcacagcag
cagagctcaaacagtgacccgacccttcctgctgatcctcctcctcctccgcccgccctc
tcccagtcaacgacgcaggagacaaagcggccggcggcggagaaggacggagaggaggac
gaagaggagctggaagaggctttggacgaagaagaggaagaggaggaggaggaggaggaa
gagtcagcagaacaaaaagaaaacagtggtcctgaaggttcggggaaagccgagtcgtct
tcatccgagtctgggagctcttcttcctcctcagatgactcagactccagtgacgaggac
tga
DBGET
integrated database retrieval system
