Acanthopagrus latus (yellowfin seabream): 119017642
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Entry
119017642 CDS
T08233
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119017642 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119017642 (dmxl2)
Membrane trafficking [BR:
alat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119017642 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119017642 (dmxl2)
RAVE complex
119017642 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
119017642
NCBI-ProteinID:
XP_036950350
LinkDB
All DBs
Position
4:complement(3858322..3907957)
Genome browser
AA seq
3095 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPLSTNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP
QGNRILAATERLQLWAPPLTDALIEEEDGQITDDKPHPVLNDWNCVWQCKTAASVHVAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDLSDKRPPPVHFSFVYLAHPRSVTGMS
WRKTSKFMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTHSFSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSALVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPAALADSAVFNPDDGTGGGGFVVHWLNNKDLSFTSSMDLFMLQLRKFS
EQQLEQTTEDPLDPEGSPMKFDFDLDEMSDKASSEQGEEGEPGEQGSTKASSPGSSSSMP
LPSMLLERKMETLTTEWNKSPDMLFTIHPADGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYSFTLTESESAGAGEQGRMVQRVSHSASASLGLGSPALASS
PNLRPGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQACH
TVLPLLLTSSHHNALLTPPSAPGSLEGEQPPTFPLPKGLPSRKQLRNAATRTFHDPNAIY
SELILWRVDHIGPLSWTGGVSELARINSLHTSAFSNVAWLPTLIPSSVLGTYCNSASACF
VASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQ
CGANTQLLHVFQEDFILGYKPQKEQEAFTPAFPSGEDYQPAPFSEKFFLVVIEKDLNRNS
VLQMWHLHLKSVQACVDEPSPDYGFQSQLMVPSQAMNADSSPETSPIRPLPRSASTANLQ
SASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVR
FWHCAVECDDGYSEDNQENRVYRWEPWALMNEEEDNNSAVAVSGRPVAVSCSYTGRLAVA
FKKPRQGQLQGSGEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSN
LFVYSRSDLYMTRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQT
SSKEGVAVITLPLGGSIKQGIRSRWILLRSVDLLSSVDGTPSLPVSLSWVRDGILVVGMD
CEMHVYAQWHQDKKPGEGDEGNLSSADIAGGQTAGSSSVFEGRTRSKSVFEGSAVVDEAL
RAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVV
RDVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLILADLDT
SYKGGEEGVKGTKRADGEGAHKSTEDQYSDLFQVQTVTTDDFMNFATDKPEKKSRVINLS
QYGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDQQYTGA
EALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPA
MQRGDPQWSELRAVGVGWWIRNINTLRKMVEKIGKAAFQRHNDPLDAALFYLAMKKKAVL
WGLFRSQHDEKMTQFFKNNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIE
VLLEKMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRS
IAYWIMKDYTRALDTLLERIPKEDDENPGQLVSTFQSANPLKSVCSAYYVCFSFFVFIPL
LDVMVKSCNPVVFSFYNYLRTHPLIIRRHFAKPEGTATNVGLTAEKSNADEINLIERKLF
FTTANAHFKVGCPVLALEVLSKIPKVTKKSGSSPLSKASSKANLNSSQPLENGTQGGLDW
GSTAAPAWGGNDSAGGLDWSQPLVKVEDEGLKLDWGEDKDNDEDEDDDGGLTMKKPETET
KADGGSEGGGAKLQRENSQGESEVDVIAEQLKFRACLKILMTELRTLATGFEVDGGKLRF
QLYSWLEKEIAAMHTICNYKVEGKEEESEVERWGERTASVDISDEALERIEAGAYERHQM
ERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQE
LTVKQLQSPLPLPTTLPLLSACIAPTKTVIANPVLHLSNHIHDILHTITLMESPPHPDFM
DDRVNALHTLAASLSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERKRLRTESIEE
HITPNSAPAQWPGVSSLISLLTSAREEDQPRLNVLLCEAVVAVYLALLIHGLGTHSSNEL
FRLAAHPLNNRVWAAVFGGGAKVIIKPKRPEAPPVAPPQPPAEDVDRYRRRFNMRMLVPG
RPVKETPAAPPPVPTERPAYREKFIPPELSMWDYFVAKPFLPLSDSNALCDSDESGAEDD
EDDDDAFLSDTQITEHSDPNSYSWALIRLVMVKLAHHNVKNFLPLTGLDFTDLPVTSPLC
NAVLKTLENWEQLLLERMNKFDGPPPNYINTYPTDLSAGGGPAILRHKAMLEPDNTPFKT
KNHLSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESVENHTDHISPNCIAGASSPYK
VEADLGYPGGKAKIIHKESDIIMAFAINRANSNEIVLASTHDVQEVDVSSLVSVQPYTWI
GDDFDKESRSSDDIDHRSSHTNIAQASSVPFAPPQMPVSASMPWLGSGQTSMGASVIMKR
NLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKC
GVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKTCGDFAFITSSSLIATAGQSNDNRNVCL
WDTLISPSNTMVHAFPCHENGATVLQYAPKQQLLITGGRKGFVCVFDIRQRQLLHTFQAH
DSAIKALALDAFEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQVE
TRPGNRIFTCGADGTLKMRVLPDRYNIPSSLVDIL
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctgacgggagctgtgaaccctggagattgctgctattcggtg
ggaagcgtgaatgacatacctttcacggcctatggctcaggttgtgatgtagtgatcctg
gccagtgactttgactgtgtgcagattatccccggcgctcagaatggaaacatacaggtg
ggctgtgtggagtgctcccaccagcttggcaggatcgctgcatcctacggaaacacagtc
tgcatctttgaacctctttctaccaacccaaacaaacgccacaagcagcttaactatcag
tggcaaaagacaggacagttcttccttgatgccatcacctacaacctggcctgggaccca
caagggaaccgcatcctagcagcgactgagcggctccagctgtgggctccaccactgaca
gatgccctgatagaggaggaggatggacagataactgacgacaagccccaccctgtcctc
aatgactggaactgtgtctggcagtgcaagactgcagcatctgttcatgttgccaagtgg
tctcctgatggggagtactttgcaacagttgggaaggatgactgtttgcttaaagtgtgg
tatcccaccacgggctggcgctctgcagtggtggtccaggacctctccgacaaaaggcct
cctcctgttcacttctcctttgtttacttggcccatcctcgctcggtcactggtatgtcc
tggaggaagaccagcaagttcatgcccaagggctcggtatgtaatgtgctgctgacatcc
tgcgaggatggtgtgtgtaggttgtggtcagagaccctgctgccagaagacagcctgctc
ggaggacagatctctgagaacacacactccttcagctctagtctgccaggcctggcaggc
aacaaggacaagatccagcatgctttggagtcaatccaccacctgaagcatctacgccgg
ggtcgccgacgatcctctgctctggtggcacacagtgagctgctgccctctcagcttggc
acacaggacgctcacactcaccgccacatcgctcatcatgccaacgccctgtgtcacttc
catatttcagccagtattaaccccaacacagacatcccagcagcactggctgactctgca
gtgttcaacccagatgatggcactggtggtggaggctttgttgttcactggcttaacaat
aaggacctcagcttcacctcctctatggacctctttatgttgcagctccgtaagttctct
gaacagcagctggagcagactactgaggaccccctggaccccgaaggatcccctatgaag
tttgactttgacctagacgagatgtctgacaaagcctcctcagagcaaggtgaggagggg
gagccaggggagcagggaagcaccaaggcttcctccccgggatccagctccagcatgcct
ttgccctccatgctgctcgagcggaagatggagactctgaccacagagtggaacaagagc
ccagacatgctgttcacaatccaccccgccgatggatctttcctggtgtggcatgtgaag
tacttggacgaattcaaccagggcatcttcagacaggttcaggtgtccttctcctcccgc
attccagtggcatttcctacaggtgatgccaactcactgagtaaaaacatcctgatgtac
tccttcactttgactgagagtgagagtgctggagcaggggagcaggggaggatggttcag
cgtgtctcccactctgcttcagcctcgcttggcctgggttcacccgccctggcctcctct
cccaacctacgtcctggcatcagccctgcggtcatgatggtctccaagcatgtcgatgga
tctcttaaccagtgggctgtgacatttgctgagcgttctgccttctccaatgtattgacc
gtctctcacaagttccggtactgtggccaccgcttccatctcaatgaccaagcctgccac
actgtgctgcctctgctgctgacctcctctcatcataacgcactactcaccccgccctcg
gctcctggcagcctggaaggagagcagcctcctacctttcccctaccaaagggactcccc
agcaggaagcagcttcgtaatgcagcaacaaggacctttcatgaccccaacgccatctat
agtgaactgatcttgtggagggtggaccacattggacccctgtcttggaccggaggggtc
tctgaactggcccgtatcaactctctgcacacctctgccttcagcaatgttgcctggcta
cctaccctcatacccagctctgtactcgggacttactgtaacagtgccagcgcctgcttc
gtggcatcagatggtaaaaacctgcgcctctatcaagctgtggtggatgccagaaaactc
ctggatgagctgtcagatcctgaaacgtctaaactggttggcgaggtgtttaacatcgtc
agccagcagtccactgccagacccggatgtatcatagagttggacgtcataacaaaccag
tgtggcgccaacacccagctgctgcatgtcttccaagaggacttcattcttggttacaag
cctcaaaaagagcaagaagctttcacaccagctttcccatctggtgaagattatcaaccc
gccccattctctgagaagttcttcctggtggtgatagaaaaggatctcaacaggaactct
gtgctgcagatgtggcacctgcacctgaagtcagtgcaggcttgtgttgatgagccgagc
ccagactacggcttccaaagccagctcatggttcccagtcaagctatgaatgccgactca
tccccggagacctctcctatcagacccctcccacggtcagcctcgacagccaatttacag
tcagcaagcaaactcatcctcagctccaagctggtgtacagcaagaggctcgacctgcct
cacggggtcgaggttaccagggccaccccctctgcaggtcatctgagttcctcctctatc
taccctgtgtgcctggctccctacctgattgttaccacctgctctgactctcgtgtgcgc
ttctggcactgtgcggtggagtgtgatgacgggtatagcgaagacaaccaggagaaccgg
gtgtaccgctgggagccttgggccctgatgaacgaggaggaagacaacaacagtgctgtg
gctgtgtccggacggcctgtagccgtgtcctgctcctacaccggcaggctggctgtggcc
ttcaaaaagccacgacaaggacagctacagggttccggagaggacttctccatgcacgtt
tccatctatgagtgtgagtccactggcggctcagagtgggttttagagcaaactctccac
ctggacgatttcaccagaccctcgtcgaccctggatccaagagtcagtgtggactccaac
ctctttgtgtacagcagatctgacctttacatgaccagagaccacagctcccccaacatc
aagcactatgtccacctggactggctctcaaaggaagacggatctcacatcctcaccgtg
ggagttggatccaacattctcatgtatggtcggatctctgggatggtgaacgagcagacc
agcagcaaggagggggtggctgttatcacccttcctctagggggcagtatcaagcagggg
attcgctcacgctggatcctccttcggtccgtggacctcctgtcctccgtggatggaaca
ccgtctctgccagtctccctgtcctgggtgagggatggcatcctggtggtgggcatggac
tgtgagatgcacgtgtacgcccaatggcaccaggacaagaagcccggtgagggagatgag
ggcaacctctcatctgcagatatcgctggaggtcaaactgcaggttcctcctcggtcttt
gaaggtagaaccaggtctaagagtgtgtttgaagggagtgccgtggtggacgaggccctt
cgtgctccagcgggacttcaggaaggaggactatttgaggcagctcactccctgtcccca
actctgccccagtaccatcccacacagctgctggagctcatggacctgggcaaggttcgc
cgtgccaaggccatcctcgctcacctggtgaagtgtatcgccggcgaagttgcagtggtg
agggatgtggaggcgggtgaaggcggagccaggagacatctgtcccggaccatcagtgtg
actggcagcacggcaaaagacactattgtggctggccgcgatggaggcagggactacaca
gagatcaactccatccctccattgcccctctactccctcattttggctgacctggatacc
tcgtacaagggaggggaggagggtgtgaaggggacgaagagggcagatggtgagggagcc
cacaagtccacagaggaccagtactctgacctcttccaggtacaaacagttaccacagat
gacttcatgaactttgccaccgacaaaccagagaagaagtctcgagttatcaacctctct
caatatggacctacctactttggaccagagcatgctcaggtattatctagtcacctcatg
cactccagcctcccaggactgaccagactggagcagatgttcttggtagccttggctgat
actgttgcaaccaccagtgctgaggtcaccagctccactgatcagcagtacacaggtgct
gaggctcttgatgagtgtggactgaggtacctgctggccatgcgtcttcacacctgcctg
ctcacctctctgcccccactctaccgcatgcagctgctccaccagggcttatcaacatgc
cactttgcatgggccttccactcggaggcggaagaggagctgttgaatatgattccagcc
atgcagagaggcgacccacagtggtctgagctcagagctgttggagtgggttggtggata
cgcaacatcaacactctgcggaaaatggtggagaagataggtaaagctgcattccagagg
cacaatgaccctttagatgctgctctgttctacttggccatgaagaagaaagctgtcctg
tggggactcttcaggtctcagcatgatgagaagatgactcagttcttcaaaaacaatttc
actgaggaccgctggcgaaaggcagctctgaaaaatgctttctccctgctggggaagcag
cgctttgaacaatccgctgccttcttcctactggctggatcactcaaagacgccatagag
gtgttgttggagaagatggaggatctccagttagccatgatagtagcaagactgtatgag
gctgactttgagaactcatccacctgccaaggcctcctttatgagaaggtcctgggctgt
aacagggatggaagtggttaccactgttccagactgcaccctgacccgttcctgcgcagc
atagcctactggatcatgaaggactacacccgagcactcgacacactgttggagcggatc
cccaaagaggatgatgagaaccctggtcagctggtttcaacatttcagtcagcaaatcct
ctgaaatctgtttgctctgcttattatgtttgtttttctttttttgtcttcatccctctg
ttagatgtgatggtaaaatcttgcaacccggtggtgtttagtttctacaactacctgcgg
acgcaccctttgatcattcgtcgccactttgcaaaaccagagggcacagcgacaaatgtg
ggcctcacagctgagaagagcaacgcagatgagatcaaccttatagagcgcaaactgttc
ttcaccactgccaatgcacacttcaaggtgggctgtcctgttctggctctcgaagttctc
tccaagattcccaaagttaccaaaaaatctggctcctcacctcttagcaaagcctcctct
aaggccaatttgaattcgagccaacctctggaaaatggcacccagggaggtttggactgg
ggctccacagcagctcctgcctggggagggaatgacagtgcgggtgggttggattggagc
cagccccttgtcaaggtggaggatgaggggctgaagctggactggggagaagacaaggac
aatgatgaagatgaggatgacgatggtggtctgaccatgaagaaaccagaaactgagacc
aaagcagatggaggctcagagggtggtggagccaaactacagagagagaactcacagggt
gagtcggaggtggacgtgatagcagagcagctgaagttccgtgcctgtctgaagatcctg
atgacagagctgcgtacgctggccacaggcttcgaggtggatggagggaagctccgcttt
cagctctacagttggctggagaaagagattgcagccatgcatacaatctgcaactacaag
gtggaggggaaggaggaggagtcagaggtggagcgttggggagagcgcacagcatcagta
gacatatcagatgaagccctggagcgtatcgaggccggcgcctacgaacgccaccagatg
gagcgacgtcgtcttcaggccaagcagcagcactctgagaggcgcaaggcgtggctgagg
aagaaccaggccctgctgagggtgtttctgtcctactgcagcctgcacggagccaagggc
ggaggagtgacgtctgtgcgcatggagcttctgttccttctgcaggagagccagcaggaa
ctcacagtgaagcagctgcagtctcctctgcctctgcccacaactctgcctctgctgtct
gcttgcatcgcccccaccaagacggtcatagctaatccagtcctccacctcagcaaccac
attcacgacatccttcacaccatcaccctcatggagtctcctccgcatcctgacttcatg
gatgatcgggtgaatgctctgcacacacttgcagcttctctgtctgcttgcatctatcaa
gcactgtgtgacagccacagctacagcagccaggcggaagccaaccagtttacagggatg
gtgtaccagggcctattgctcagtgagaggaaacgactccgcacagaaagcattgaagag
cacataactcccaactctgctcctgcacagtggccaggtgtgtcctccctgatttctctg
ttgacgtctgcgagagaggaggaccagccgaggctcaacgtgctcctgtgtgaagcagtc
gtggctgtttatcttgcgctgctcatccacggcctcggcacgcacagcagcaatgaactc
ttccgtctggcagcacatcccctcaacaaccgcgtgtgggccgccgtctttgggggaggc
gccaaagtcattattaagccaaagaggcctgaggcaccaccagtggctccccctcagccc
ccagcggaggatgtggatcgatacagacgtaggttcaacatgaggatgctggttcctggg
cgccctgtgaaggagacgccagctgccccgcctcccgtgcccacagagagacccgcatac
agggaaaagttcattccccccgagctgagcatgtgggactactttgtagccaaaccgttc
ctgccgctgtcggacagcaatgctctttgtgactcagacgagagcggtgcagaggatgat
gaagacgatgacgacgccttcctttctgacacacagataacggagcactctgaccccaac
tcctacagctgggctctgatccgcctggtcatggtgaaactggctcatcacaacgtcaag
aacttcctccccctcactggcctcgactttacagacctgccagtcacttcccctctctgc
aacgctgtgttgaagactttagagaactgggagcagcttctgctggagcgaatgaacaag
tttgacggccctcctcccaactacatcaacacttaccccactgacctcagcgcaggaggt
ggcccagccatactccgacacaaggccatgctggagccagataacacacccttcaagaca
aagaaccacctttccttcccagctcgacgtctttggcatttcctggtcaaacaggaagtt
cttcaggagactttgatccgttacatcttcactaagaaaaggaagcagagtgagtctgta
gagaaccatacggaccatataagcccaaactgcatagcaggagctagcagtccctataag
gtggaggcagatttgggctacccaggaggcaaagctaaaatcattcacaaggagtctgat
ataatcatggcatttgccattaacagggccaactccaacgagatcgtgttggcctccact
catgacgtccaggaggtggacgtgtcgagtctggtgtcggtccagccctacacctggatc
ggggatgactttgataaagagtcccgcagctctgacgacatcgatcatcgctcctctcat
accaacatcgcccaggccagctctgtccccttcgcgccaccacagatgccggtctctgca
tccatgccgtggctcggcagcggccagaccagcatgggagccagtgtgattatgaagaga
aatctgaataacgtgaagagaatgacgtctcatcccatctatcagtattacatgacggga
gctcaggacggcagtgtgagaatgtttgaatggaacagacctcagcagctcatttgcttc
agacaagcaggcaacgcaagagtcacccggctctatttcaactcccagggcaataagtgt
ggggttgctgacggagaaggcttcctcagtctctggcaggtcaaccagacttcctccaac
cccaaaccctacctgagctggcagtgtcacactaagacttgtggtgatttcgccttcatc
acgtcctccagcctcatcgccaccgccggacagtccaatgataacagaaatgtttgcctt
tgggatactctgatttcacctagcaataccatggtccatgcgttcccctgccatgagaac
ggggccactgtgctgcagtacgctcccaaacagcagctgctgatcaccggaggcagaaaa
ggctttgtgtgcgtgttcgacatccgccagaggcagctgctccacactttccaggcccat
gactcagccatcaaggccctcgcactggatgccttcgaggacttcttcgtcaccggctct
gcagagggcaacatgaaggtgtggaagttagctggccacggcctcatgcactcttttagc
accgaacacgccaagcagtccatcttccgcaacatcggtgccggcgtcatgcaggtggag
acgcgtcccggcaaccgcatcttcacctgcggagcagacggcaccctgaagatgagggtc
ctccccgaccgctacaacatccccagcagcttggtcgacatcctgtaa
DBGET
integrated database retrieval system
