Acanthopagrus latus (yellowfin seabream): 119017670
Help
Entry
119017670 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119017670
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119017670
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
U-box type E3
119017670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119017670
NCBI-ProteinID:
XP_036950430
LinkDB
All DBs
Position
1:7529127..7544271
Genome browser
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLSELKRQIMGRERLKATDCDLQITNAQTREEYTDD
EAHIPKHSSVIVRRTPIGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSMSLAQLAKTANL
VDANASEEDKIKAMMSQSNHEYDPIHYSKKAVGPPPAHYTCFRCGKAGHYIRQCPLLMVQ
DKSVEGPKQVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSTDDETDPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTALLDSEEHVCFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKRVRKQLQNAAPPPPRPQLVRPLHSRQQDP
LMANVTQAPAISAPITAPQAQVPASAPAPAAADAATTTAPAAAAPAAPTPPHVAAATAVE
GQAASPAPPPVVEHHSPMRTTSHGEPPPPGETDPEPTVTPESSGTSESGSQNYHLNVVGH
PPPARLHHPSGHHSRPHHSNRGGGRHWDRPFRGRGEQSSTHLQTGPPPAPVAPVFPAPSL
YPPPLQSYPSPYTSGPGLVPPPVSYQPQPLYAPGPPVLNPPWVTPGSQPPLVPLPPSLSQ
PPLSKEDFYRQRHHRQDKVTSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRSPFS
RSYSRSRSRSRSRSRSRSRSYSYSPSRSRSRSRSHGRSYPHSPYSRRNGRSYGRSRTRSR
SRSRSYGYRRSGSPRSPPAYRGGAWEGVEAPGPYRSRSRSRSPGFRNRSPGPRKPPPREF
PPYELKGPSPGGHERWERERRQWEKEYADWYNKYYKDYDGQPPPMHHRGRSSRDRERDRM
SSLTRDYSPQGRGRRGREERGAPPHHPPASSSSGSKSSAKVLKTKKVKRRKTGEEPEPSH
QSVDRGDATPVRDEPMDEIPSSIKMPPVSSKPLVGASTTKAPASKSTVAPAKPSTKSTSK
TQSDKTKREKPSKVKAKVKTESVKVKSDKVKKKTGEGVVTKKKDSSCSSVAKPVKTIKAK
PEDAPNVTTPKKEKGKSSSVRPALLKTPPLSSQNLSLHHPSIHDGPRSSHDMRGRRDVPQ
SGGLLPLPHQHGLPLLHRPPSPVDSRRRMGEEGRSLLGPPPGKLRRLDGLGGGSDIISHS
HMSHQPPLHRLPPSSDRPGLLPLPGTREMSRGEADRGPIRPLMDLQLGRMHVQSTDTQVK
PTTQRKIKLNRDLGRKGSTESAPSDRTSSGPEKTTSTSDRSSAAHNSDGDRHSSTAEGAG
RKERSASAERGVSRERPGSAGERHQGSDRDQSRSSGLDRERDRASGSDRERDRGTTSDRE
RDRTSSSGSQKAAVTVERDAEGERSTKTDRKTSSGGSAGGRSVSLDKMTIAEKSAVAKKQ
TDHQEKPSTSSKERGEGSERAAKSDRSVSKDRAERSVPSGEKPAAAHREAGKDGEEPVVK
SKPRISRKALTSHTTSSTRSTQETKRDSDKDQKSQSSKTTEQPPSSPVNSRARSPSVSPV
TSPAREEPLIQPPPRSKWEREDDEEGQENGLTAPKEPSPVPQRSRGREAQTEAPKPARSE
GWEAPREERRGAVREERKGRAPREEGKGGRMAPTNSDKPTKTKLVREEGRGVREEGRASA
REEGRGGGGREEGRGGTGKEERAAEGRVGGGREENRGPEPRRQRLCSDLGRETDEAAFVP
DYSEGEGSEQERGRSGSPSLSNSQPSNSPTQSNHSGSGTAADKKKKKHKKHKKHKKHKKH
GSQEKGEQKEHKEHKHKHKKKKHKKNKDKDAGDEEEKMDKAEEGAPC
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttttcttccaaactggactacaacacagtcactttcgat
gggctgcatatcaccctcagcgagcttaaaaggcagattatgggccgagagcgcctcaag
gccacagactgcgacctgcagatcaccaatgcgcagactcgagaagaatacacagatgat
gaagcccacatcccgaaacactcgtccgtgatcgtccgccgcactccgattggcggagtg
aaacctgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcttct
agacccaccgattcttctccttctatgtcacttgcccaacttgccaagactgctaacctg
gttgacgcaaatgcatcagaagaggacaagattaaagccatgatgtcacagtccaatcac
gaatatgaccccatacattactccaagaaggcagttggacctccacctgctcactatacc
tgctttcggtgtggaaaggctggccactacattcgccaatgtcccttgcttatggtccaa
gataagagtgtggagggtccaaagcaagtgaggattagtaaaggcattcctcagagcttc
atggtgaaagcagagccaggcaccaagggagccatgttgaccagcactggggaatatgct
atacctgctatagatgcggaggcgtatgcacaaggaaagaaggagcgccctccgtttgtt
cctcatgaccaatcatcaactgatgatgaaacggacccaataccagatgaactcttgtgt
ccgatctgcaacgacctgatgactgatgcggtggttataccatgctgtggaaacagttac
tgcgacgactgtatcaggacagctttgttggactcagaggagcacgtctgcttcacatgc
aagcagtcagatgtttcacctgataatctcattgccaacaagtttcttcgacaggctgtg
aacaactttaagaatgaaactggatacaccaaacgtgtgcgcaagcagctccaaaatgca
gcgccacctccaccgcgccctcaactggtcaggcctctgcactcaagacagcaggaccca
ctgatggcaaatgtcactcaagctccggctataagtgcacccattaccgcccctcaagca
caggtcccagcctctgcacctgcacctgctgctgctgatgctgcaactactactgctcct
gctgctgctgctcctgctgctcctactcctcctcatgttgctgctgcaactgctgttgaa
ggacaagctgcttcaccagcccctccacctgttgttgaacaccattctcctatgcggacc
accagccatggtgaaccaccgccaccaggtgaaacagacccagaacctactgtgacgcca
gaatcatcaggaacctcagaaagtggatcacagaattaccatttgaatgttgttggccac
ccgccacctgcgaggctacatcatccttcaggtcaccattcacggccccatcactctaac
agagggggaggcagacactgggacaggcctttcagagggagaggagagcagtcctccact
cacctccagacaggtccaccccctgcacctgttgctccagtgtttccagctccatccttg
tacccgcctccactgcagtcctacccctctccgtacacctctggaccaggccttgtcccc
cctcctgtcagttaccagccccagcctctgtatgcgcctggaccaccagttctcaaccct
ccttgggttactcctggttcccagccccctcttgtgcctcttccaccctccctctctcag
ccccccctctctaaagaagatttctacagacagcggcaccaccgacaggataaagttaca
tctaaactggatgaatttacaaaagacttccacaaagagcttatgaagtacagaaatgca
ccaaagagacgaagaccgtcttattccaggtccaggtcatacagtcgctcgccattcagc
cgttcttactctcgttcgagatccagatcaaggtctcgatcaagatcgagatccaggtcc
tactcttattcccccagtcgatcccgctctcgttcgcgctcccatggccgctcttatccc
cactccccttattctaggcgcaatggacgtagttatggacgctcacggacaaggtcccgt
tctcgttcaaggtcttatgggtatcggcgctctggctcaccacgctctcctcctgcttac
cggggaggagcttgggagggagtagaagcaccaggaccctacaggtctaggtcaagatct
cgctctcctggcttccgcaaccgcagccctggtccaagaaaaccacctccaagggagttt
ccaccctatgaattaaaaggtccaagtcctggtggccatgagcgctgggaaagagagagg
cgccagtgggagaaggagtatgcagactggtacaacaagtactacaaagactatgatggc
caacctcccccaatgcatcacagaggtcgtagcagcagagacagagagagggatagaatg
tcctcattaactagagattactccccccaggggagaggaagaagagggagagaagagaga
ggtgctccacctcaccatcctccagcatcttcctcatcaggttccaagtccagcgctaaa
gtgttgaagacaaagaaagtgaaaaggaggaagaccggagaggaaccagaaccatcacac
cagtcagtggacagaggggatgctacgcccgtcagagatgaaccaatggatgaaatccct
tcatccatcaaaatgcctcccgtctcgtcaaaacctctagttggcgcctcaaccactaaa
gctccagcctctaaaagcactgttgcacctgctaaaccctcaaccaagtcgacatcaaag
acgcagtcagacaagaccaagagagagaagccttcaaaggtaaaagctaaagttaagaca
gagagtgttaaggtaaaaagcgacaaagtgaaaaagaagactggagaaggagtggtgacc
aaaaagaaagattcctcatgctcctctgttgctaaaccggtaaagaccattaaagccaaa
cctgaagatgcccccaacgtaactactcctaaaaaagaaaagggtaaaagctcctctgtg
aggcctgccctgctgaagacccctccattgtcctcacagaacctctctctgcatcatccc
tctattcatgacggccctcgatcgagccatgacatgcgaggtagaagagatgtcccacag
agcggtggccttcttcccctcccccatcaacatggactcccgctcctccatcgacctccc
tccccagtggacagtcggaggcggatgggagaggagggtcgctccttgcttggacctcct
cctggaaagctgaggagactagatgggttaggaggtggaagtgatatcatctcccactca
cacatgtctcatcagcccccgctccatagactcccaccctcgtcagacaggcctggactc
cttcccctgccagggactcgggagatgagccgtggagaagctgatcgtggacctatcaga
cctctgatggaccttcagctgggtcggatgcatgtacagtccacagacacacaggtgaag
ccaacaacccagaggaaaatcaagttgaaccgagatctggggagaaaaggcagcaccgag
tctgcaccctcggacagaacatcatcaggtcctgagaagactacctccacgtcagaccgt
tcatctgctgctcacaactctgacggagaccgacacagcagcacagccgaaggtgctgga
agaaaggagcggtctgcatctgctgaaaggggagtctccagagagagaccaggaagtgct
ggagagagacatcaaggctcagacagagaccagagcagaagctccggactggacagagag
cgagaccgagcctctggatcagaccgagaaagagacagaggcacaacgtctgaccgagag
agggacaggacatcgagctcaggctcacagaaggcagcagtaactgtggagagagacgcg
gaaggagagaggtcgacaaagacagatcgaaagacctccagtggtggaagtgcaggaggg
aggtctgtctctctggataaaatgaccatcgcagagaaatccgccgtcgccaagaaacag
acagaccaccaggagaaaccaagcacatcctccaaggagagaggcgaggggtctgaaaga
gctgctaaatctgacaggagtgtgtccaaggacagagccgagaggagcgtcccctcagga
gagaaaccagctgctgctcacagagaagcagggaaagatggtgaggaacctgttgtgaag
agcaaacccaggatcagtcgcaaggccttgacaagccacaccacgagctccaccaggtca
actcaagaaacaaagcgagactctgacaaagaccaaaagagtcaatcctccaaaaccaca
gagcagcctccatctagtcctgtgaacagccgtgcccgcagcccgagtgtcagcccagta
accagcccggcgagggaagagccactcattcagcctcctccacgctcaaagtgggagaga
gaagatgatgaagaaggccaggaaaatgggcttacggcacccaaggagccctcaccagta
ccacagaggagcagaggcagagaagcacagacggaagcacctaaacctgccaggagtgaa
ggctgggaagccccaagggaggagaggagaggagcagtcagagaggagaggaaagggaga
gctccaagggaggagggtaaaggtggcaggatggcaccgacaaattctgataaaccaacc
aaaacaaaacttgtaagggaggaggggagaggagtgagagaagaagggagagcttcagca
agagaggagggtagaggaggaggaggaagagaggaggggcgaggtgggacaggaaaggag
gagagagcagcagaaggcagagttggtggaggacgagaggagaatcgtggccccgagccc
aggagacagcgtttgtgctctgacctgggtcgtgagacagacgaggcggcctttgtgccc
gactacagcgaaggggaaggctcagagcaggagagagggaggagtggcagccccagcctg
tccaacagccagccatccaacagccccacccagagcaaccacagcggctcaggaacagca
gcagacaagaagaagaaaaaacacaagaaacacaaaaaacacaaaaagcacaagaagcat
ggcagccaagaaaagggagaacagaaggaacacaaggagcacaagcacaaacacaagaaa
aagaaacacaaaaagaacaaagacaaagatgcgggggacgaggaggagaagatggacaag
gcagaggaaggggctccatgctaa
DBGET
integrated database retrieval system
