Acanthopagrus latus (yellowfin seabream): 119017709
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Entry
119017709 CDS
T08233
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a isoform X1
KO
K06587
integrin alpha 11
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04810
Regulation of actin cytoskeleton
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119017709 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119017709 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119017709 (itga11a)
04810 Regulation of actin cytoskeleton
119017709 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119017709 (itga11a)
Cell adhesion molecules [BR:
alat04515
]
Integrins
Integrin alpha subunits
119017709 (itga11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
Ku_N
LYRIC
GAE_BBS1
Motif
Other DBs
NCBI-GeneID:
119017709
NCBI-ProteinID:
XP_036950496
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All DBs
Position
4:5595210..5671535
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AA seq
1200 aa
AA seq
DB search
MHACTGKHMEYYCFLLVWICCQQLGSHNCFNIDTKRHRIIKGPKQAQFGYTVQQHVAAGG
EKWLLVGAPYEMNGPYQTGDVYKCSLNRRMNGNGCSKLNLGRISLTNVSERKDKMRLGMT
LTSNPKDNSFVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIV
LDGSNSIYPWYEVQAFLINILQKFYIGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKR
ARSINQRGGEETNTALGINIARSQAFKQGGRRGAKKVMIVITDGESHDSQDLQQAIEDSE
KDGITRYAIAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALKDIVDALGER
IFSLEGTSKNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVVPPKS
SYAQEFPEELKNHGAYLGYTVTSVVSARNGRLLVAGAPRFNHTGKVIIFTLKNSGNLTIL
HSLKGQQIGSYYGSEIAPLDIDGDGITDNLLVAAPMFFSGGLEKGKVYIYRVTELNRFVL
EGSLEIHNGGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRILRK
YKQRIAAADLAPGLQYFGRSIHGTMDMNNDGLVDLAVGSLGAAVLLWSQSVVRIYTTIRF
EPSKVNIFVKDCQRGGKDVTCMSAIVCFNITGRTAIPPTQEVVIKYNVSIAERRFNPRAI
LDNPTKQQPQNLTLLPGEETCEHIYFHVMETTDYARPIVFSAQVGLQDPDNGPVLDDSWP
TVVRTELPFWNGCDEDDRCIPDLALQSMNDLMTRNQFCAQPVQSRGAFCRHLSEAGSEAS
LRVIEGNRRRMVVDVRLENKGENAYNARLNISYTPNLRFSSLIVKDNSDIKIECYSEDRL
RSEKICNVSAPFMRAKSQVTFRLEFEFSHTVFLDHVRVILEAGSDGEDTSTADNFNDIYY
SLKYEADLLFTRDSNPTRYEIRSELSLEEHGVIGPLFNLTFQIQNLGYFPVNNLQLNIEI
PEMTKNGNQLLQISDFYIDQRDGTHCLPPQHVAQSRSSPEDLSRFSRLNQSNTLTLPIQC
SVNVASYREITTRISGALRIDTLHALKFKILELVTSASVELPSSSPMFLHEERPVRHIIL
EIRKEGDYRIPTWIIIGSTLGGLLLLALLSLALWKLGFFQRQKRRDEDEQEANGKVAEER
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttgcaccggcaaacatatggagtactactgcttcctcctggtctggatctgc
tgccagcagttagggtcccacaactgctttaatatcgacaccaagagacacaggatcatc
aaaggccctaaacaagcccagtttggatacactgttcagcaacatgtcgctgctggagga
gaaaagtggttattagtgggtgccccgtatgaaatgaacggcccataccagacaggggat
gtttataaatgttcactaaacagacgaatgaatggcaatggctgctccaagctcaactta
ggaaggatatctctgaccaacgtatcagagcggaaggacaagatgaggctgggaatgaca
ctcacgtccaaccctaaagacaacagctttgtggcctgtgggccgttatggtcctatgag
tgtggcagctcttactacagcactggcatatgctccagagtgaatgccagcttcaagttc
tccagaacaattgcgcctgcctttcagagatgtgagacctatatggatattgtgattgtt
ctggatggctcaaactccatctacccctggtatgaagtgcaggcttttctcatcaacatt
cttcagaagttctatatcggaccaggtcaaatacaggttggagtcgttcaatatggagag
aaggtggttcatgaattcaaactcagtgactacaaatctgttgaggaagtagtgaaaaga
gcgcgcagcatcaaccaacggggtggcgaggagaccaacactgcacttggcatcaacata
gcacgctctcaagctttcaaacaaggaggtcggcgcggtgccaagaaggtgatgatagtg
ataactgatggagagtcacatgatagtcaggatctccagcaggccatcgaggacagtgaa
aaggacggcatcacgcgttacgccattgctgttcttggctactacaaccgtcgggggatc
aaccctgaggccttcctcaatgaaatcaagtatattgccagtgacccagatgacaagcac
ttctttaatgtgacagacgagtcagcactgaaagatatcgtggatgcactcggagaacgc
atcttcagtttggaaggaaccagtaagaatgggacagcgtttggcctccagatgtctcag
gctggattttccgcccacaacgtcgaggatgggattctggtgggtgctgtcggggcttat
gactggaatggtgccgtgctaaaggaaacacgtcaggggaaggtggtgcctcccaagtcg
tcctacgcacaggagttccctgaggagctcaaaaaccacggtgcctacttgggttatact
gtgacgtccgtggtgtcagccagaaatggccgtctactcgtagccggagctccacgattt
aaccacacaggcaaagtcatcatcttcacactgaagaactcaggcaaccttaccatcctg
cactccctcaaaggccagcagattggctcctactatggcagcgagattgcaccgttggat
attgacggagacggtataactgacaacctcttggtggcagcacccatgttcttcagcgga
ggcctggagaaggggaaagtgtatatctacagagtgacagagctgaatcgttttgtcctt
gaagggtcgttggaaatccataacggtggccagaatgctcgctttggctcgtcgctggcc
cctgtccctgatctgaacggtgacggcttcaatgacctggtggtgggagccccgctagaa
gatgaccacaaaggagccatttatgttttctttagccagcacaacagaatactgcgcaaa
tacaaacagaggatagcagcagcagatttagctcctggcctgcagtattttggccgcagt
atccatggaacaatggacatgaacaacgatggtttagtggacctggcagtgggttccctc
ggtgctgctgttctcctttggtcgcagagtgttgtccggatatataccaccatcaggttt
gagcccagtaaggtcaacatctttgtgaaggactgtcagagaggtggcaaagacgtgacc
tgcatgtcagccattgtatgtttcaacatcactggcaggacagccatccctcccacacag
gaagttgtgatcaaatacaacgtctccattgcggagagacgttttaatcctcgggccatt
ctggacaacccaaccaagcagcagcctcagaacctgacgctccttcctggagaagaaacc
tgtgaacacatctactttcacgtcatggagaccacagactacgcaaggcccatagtgttt
tctgctcaagttgggcttcaagatccagacaacggaccagttctagatgacagctggcct
actgttgtgaggactgagctgcctttctggaacggctgcgacgaggatgaccgctgcata
cctgacctggcactgcagagtatgaatgacctgatgactcgaaatcagttctgtgcacaa
cctgtacagtctcgtggtgccttctgccgccatctgagtgaagcagggagtgaagcatct
ctgcgggtgatagagggaaacaggagaaggatggtggtggatgtccgattggagaacaaa
ggagaaaacgcctacaatgctcgcctgaatatcagctacacacccaacctgcgcttctct
agtcttatagttaaggacaactctgatatcaaaatagagtgttacagtgaggacagactc
aggagtgagaagatctgcaatgtcagtgctccgttcatgagggccaagagtcaggtcaca
tttcgtctggagtttgagttcagtcatactgtcttcctggaccacgtcagggtgatcctg
gaggccggcagtgatggcgaggatacgagcacagctgataatttcaatgatatctattac
tcactgaaatacgaggcagaccttctcttcacgagggactcaaatcccactcgatatgag
atcagatcagagctgtctctggaggagcacggtgtgattggccctcttttcaacttgaca
ttccagatccagaacctcggctactttccagtaaataatctgcagctcaacattgaaatc
ccagaaatgacgaaaaatgggaaccagctccttcagatatctgacttctatattgaccag
agggatggtacgcactgtttaccacctcagcatgtggcgcaaagcaggtcgtcgcctgag
gatctttcacgcttctcccgcttgaaccaatccaacaccctgactctgccgatccaatgc
agtgtcaatgtggcctcttacagagaaataacaaccaggatatcaggagctctgagaata
gataccttacacgcactgaagtttaaaatcttggaactggtaaccagtgcatcggtggag
ctaccctcctccagccccatgttcttacatgaagagaggccggtcagacatataatactg
gaaatcaggaaggagggagattacagaatccccacctggataatcatcgggagcacactg
ggagggctcttattgttagccctgctcagcctcgctctatggaagctcggcttcttccag
aggcagaagcggagagacgaagacgagcaggaggcaaacgggaaagtggcagaagagcgg
taa
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