Acanthopagrus latus (yellowfin seabream): 119017735
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Entry
119017735 CDS
T08233
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119017735 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
alat03036
]
119017735 (tnrc6c2)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119017735 (tnrc6c2)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119017735 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
119017735
NCBI-ProteinID:
XP_036950564
LinkDB
All DBs
Position
1:complement(17969754..18102104)
Genome browser
AA seq
1902 aa
AA seq
DB search
MEEKKKKKQEEKTKTDVAQKKAADQKPKVPEPAPTKPSLGPPPHHLHPASPTLPLSSSSS
SSGNGKRASSSSQVSTQTPPQQQCQLSSASAPRYPPREVPPRFRQQEHKQLLKRGQPLPA
GALSALTLSSSSSSSSSSSPSSSYSTSSTTTSSTTPNSATSSAGKRLPDISLQSGPVAQY
ETSHWGASLPIDSPSSANSWDKVIIDRSDTEAWPSISRSSDSSHPAAPECPLGSASSNQD
TSAVTTTNSSSFLSMATGAAGQQAHYPSLKANNNMMTGPGSANTLAGNRGWGSDGKQDGM
NGGRVIAPNNWGSPNFNLNLNPNANPSAWPVLGHEGGGGGGIGPSGMSNSPSLPPGINGN
GNMGNGSLGGADNGGGGWGGMISANENDQQHPSNKTSMSFSMEPANLNTDGPNHTKQQQQ
AQEPMSPIHGLTGWGGQSPTESSQLNGDTTGSSVWGSGETKAADSPKDSGWDSTPSVGLS
AWGRQGSGGGSSGSGGWGEWGKSSGAVDASKGWDSVDAGSSGSGQEQNLSSWGQQPGTAP
ASEGSGDSSEGRSNHRDRSSSMDYTPVLPRQDLDPRVLSNTGWGQTPIRQHTVWEMEEAN
SNDGKSNSSSDTLGGSSSNGGPSSTNGGTINPNIGPSQRPGSGGKNDSEGSSSSGWGAPP
PQPMQHGPGWRDTPQSHSKASNGNGTTSGWGDHMPANDPRNGGTPSWGSEDKKSSWDDGP
MKSQPSGWGEGPKISHGWGNSNGASNNSSTGEWGEAEVKNNGSSSNMWEGEGGNGGSSGW
KDSPRGGNRGGGWSKPAPTMSNSNWGETPRTSGPVQGGWGSSKPQESSSSSTGSGGGGSM
GSWGGPGSVKQNTSTWGSGSKQDQGMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPVTYNK
TVNMWDRNNPNNNPGNSGPPPSKNGGVIIPNNNNNNHSVGPGNNNHHHAHHMHHHPHHGQ
PPTLLQHHGNNNGSPSNGASHPGAPPPGRPPLANPGWGELPNVQPKSEPAWGEPAAPTST
VDNGTSAWGKPQGGVGGWADSGHEPSGPYGRANGPPGSASCKPGPKPMQDSWGNGGEEMG
MSTSQWDTEDGDMWNSPTSQESSSSCNSWGNGPKKGPSKGKIVNKPDEAWIMNRLIKQLT
DMGFPRDPAEEALKSNNMNLDQAMSALLEKKTDLDKRGMGMTDYSNGMNKPMVCRPSALS
KDPSDRNAFLDKDGVMSDDAPPSPFLPSPSLKLPLANSSLPGQGLGQGNPGLAMQNLNNR
QQIPSGMFGSSGAAQTRAMQQQQPPQPPVPSLSSSQPSLRAQVPQFLSPQVQAQLLQFAA
KNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVA
RTITNMQQQIQQHQRQLYQALLMKQQQLPSHSSSSSSSAGLHPPGGPAGGHGSGKSTLDP
FTGPHQAPGLADTLHTKEPPSSPNAYSTYPLSGLNPNMNVNCMEVGGMSLKEPPQPQSRL
SQWTHSNSMDSLSGNSSNMENNLNKHGAISAASSLGPPGKPPQLEDSYSPYNLMSSSESP
TSPLVPPDSWGQGKSPNEKISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSG
PTINTNIHDVNRYLLRDRNGGMNRGKLSDMKSTWSPGPISQSQASLSHELWKVPQGPRNT
TAPSRPPPGLTNNKPSSTWGGNSLGLSQGWSGSYSSEGTTWSTDSSNRTSSWLVLRNLTP
QIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEF
AGEEEVNRFFAQGQSLGANTTSWQANPGTNQNRMGAAQSHSMGQWSSGGGGGKASGGDLL
WGGVPQYSSLWGPPGGDDARVIGSPTPINTLLPGDLLSGESM
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaagacggacgtcgcgcagaaa
aaggctgctgatcagaaacccaaagtgccagaacctgctcccactaagcccagtctcggc
ccaccaccccaccacctccaccccgccagccctacgctgcccctctcctcctcctcctct
tcttctggcaatggcaagcgcgcctcctccagtagccaagtctcgactcagactccccct
cagcagcagtgccagttgtcctctgccagtgctcctcgctacccgcccagagaggtgccc
ccacgcttccgccagcaggagcacaagcagctactgaagagaggccagccactgcctgca
ggagccctcagcgctctcaccctctcctcttcctcttcctcttcctcctcctcttcgccc
tcatcatcttactctacttcttctacgactaccagcagcactaccccaaactctgccacg
tcctctgcaggcaaacgcctcccagacatatccctccagagtggccccgttgcccagtat
gagacctctcattggggagcctctttgccaattgacagcccctccagtgccaacagctgg
gacaaagtgattattgacagaagtgacacagaagcttggccctccatcagtcgcagtagt
gactccagccaccctgctgcaccagaatgccccttaggctcagctagctctaaccaagac
accagcgctgtcactaccaccaatagtagtagttttctgagtatggccacaggtgccgca
ggccagcaggcccactacccctctctcaaagctaacaataacatgatgacaggacctggg
tcagccaacacattagcgggtaacagaggctggggctcggatgggaaacaagatggtatg
aatggtggccgagtcatagcacccaataactggggctctcccaattttaacttgaacctc
aatcccaatgccaacccatcagcctggcctgttctgggccatgagggtggtggaggtggt
ggtattggccccagcgggatgtcaaattccccatccctcccacccggtattaatggcaac
ggaaacatgggaaatggaagccttggaggtgcagataatggtgggggaggttggggtggt
atgataagtgctaacgaaaatgatcaacagcacccttcaaacaagacaagcatgtctttc
agtatggaacctgctaatcttaacactgatggaccaaaccacactaagcaacagcagcaa
gctcaggagcctatgagccctatccatgggttaactggctggggaggccagtcacccact
gaatcatctcagctcaatggggacacaacaggcagctctgtgtggggaagtggagaaacc
aaggcagctgactctcccaaggactcaggctgggactcaactccctctgtaggcctttct
gcctggggccgccaaggcagtggtggtggtagtagtggaagcggtggctggggcgaatgg
gggaaatcctctggtgctgtagatgcatctaaaggctgggactcagtagacgctggtagt
tctggttctggccaagagcagaacctcagctcatggggccagcaacctggaacagctcca
gcaagtgagggtagtggggacagcagtgaaggtcgatccaatcatagagacaggtcctcc
agcatggattatactcctgtgctaccccggcaggacctggaccctagggtgctgagtaac
acaggttggggacagacccccatccggcagcacactgtatgggagatggaagaagccaac
tccaatgatgggaagagcaacagcagctcagacaccttaggaggctccagctctaatggt
ggaccctcatccacaaatggtggaaccataaacccaaacattggccctagccagaggcct
gggtctggaggaaaaaatgacagtgaagggtcatcttcctctggctggggagcccctcca
cctcagccaatgcagcatggaccaggatggcgggacaccccacagtcacacagcaaagcc
tcaaatggaaatggcactaccagtggctggggagaccatatgcctgccaatgatcctaga
aatggaggaactccatcctggggttctgaggacaagaaatccagctgggatgatggccca
atgaaaagtcagccttctggttggggagagggccccaaaatctctcatggttggggcaac
agtaatggagcctccaacaactctagtacaggggaatggggagaggcagaggtcaaaaac
aatgggtcctccagcaacatgtgggaaggagaaggagggaatggaggaagtagtggatgg
aaggatagccccagaggaggaaatagaggagggggctggagtaagcctgcgcctactatg
agtaatagcaactggggggaaaccccacgcaccagtggcccagtgcagggaggctggggc
tcttcaaagccccaggaaagcagtagcagcagcactggcagcggaggaggtggcagcatg
ggttcatggggtgggccgggttctgtgaagcagaacacatctacctggggcagtggcagc
aaacaggaccagggcatggagcccactggctgggaagagccctcccctccctccatccgc
aggaagatggagattgatgatggaacgtccacctggggcgatcccgttacctacaacaag
actgtcaacatgtgggaccgcaacaatcccaataataacccaggcaacagcggcccgcct
cccagtaagaatggtggagtgattatccccaacaataacaacaacaatcactctgtcggc
cctggcaacaacaatcatcatcacgctcaccacatgcaccatcatcctcatcatggccaa
cccccaactcttctgcaacaccatggaaataacaatgggtcacccagcaatggtgcatca
catccaggtgcacccccaccgggtagaccccccctcgccaacccaggttggggagagctt
cccaatgttcaacccaagtcggagcctgcttggggagagccagcagctccaacatcaact
gtggacaatggcacctccgcctggggcaagccgcaagggggagtgggaggatgggcagac
agtggccatgagccctctggaccctatggcagggccaatggacccccgggttctgcatcc
tgcaagccaggccccaaacctatgcaagatagctggggaaatggaggagaggagatgggc
atgtccactagccaatgggacacagaggatggggatatgtggaacagccccacctctcag
gagagcagctcctcttgcaactcttggggcaatggacccaagaagggcccgagcaagggg
aagattgtcaacaagccagatgaggcttggatcatgaatcgtctcatcaaacagctcact
gacatgggctttccgagagaccctgctgaggaggctctgaagagcaacaacatgaacctt
gaccaggccatgagcgccctgttggagaagaagacggacctggacaagcggggcatgggc
atgactgattacagcaacggcatgaacaagcccatggtgtgtcggccctctgcactctcc
aaagacccctctgaccgcaacgcctttcttgacaaggatggtgttatgtcagatgacgcc
cccccatcaccgtttctgccttcccccagcttgaagctccccctggccaacagtagcctt
cctgggcagggtctgggacaaggcaacccggggctggccatgcaaaacttgaacaacaga
cagcagatacccagtggaatgtttggcagtagtggagcagcacaaacccgggccatgcag
cagcagcagcctcctcagccaccagtgccatctctcagctcctcccagcctagtctacgt
gctcaagtgcctcagtttctctcccctcaggtccaagcacagctcttgcagtttgcagca
aaaaacattggtctgaatcctgcacttttaacctcaccaataaaccctcaacaaatgact
ctcttgtaccaacttcagcaactgcaaatggcgtaccagcgtttacaaatccagcagcag
atgatgcaggcgcaacgcaatgtttccggcccaattagacaacaagagcagcaagttgca
cgtacaatcaccaacatgcagcagcagatccagcagcaccagcgtcagctgtaccaagcg
ctgctgatgaagcaacagcaacttccctctcattcctcctcctcttcctcctccgctggt
ctgcatcctcccggtggcccggccggaggccatggctctggcaaatcaaccctggacccc
ttcacaggcccacaccaggctccgggcctcgccgacactctgcacaccaaagagccgccg
tcttcgcccaatgcctacagcacctaccctctctctggactgaatccaaacatgaatgta
aactgcatggaggttgggggtatgtccctgaaagagcccccccagccccaatcccgcctg
tcccagtggacacactctaactccatggacagcctctctggcaactcctcaaacatggag
aacaacctcaataagcacggtgccatatctgctgcctcttccctgggcccccctggaaag
cccccccagctggaggactcatacagcccttacaatctaatgtccagctctgagtcgccc
accagccctcttgtgcccccagacagctggggccagggcaagagccccaatgagaagatc
tccaatgggaccaacattaactggcccccagagttctgcccaggtgtgccatggaagggc
ctgcagaacattgacccagagaatgaccccaacatgacccctggcagcgtcccaagcggt
cccaccatcaacaccaacatccacgacgtcaatcgttacctcctgcgggacaggaatgga
ggtatgaacagaggtaaattatctgacatgaagtccacctggtccccaggacccatctcc
cagagccaagcctctctgtcccatgagctgtggaaagtccctcaagggccacgcaacacc
acggccccttccagacccccgccaggcctcaccaacaacaagccctcctccacttggggt
ggcaactcactgggcctgtcccaaggttggagcggctcctactcctcggagggaaccacc
tggagcactgacagctccaacaggaccagcagctggctggtgctgaggaatctcacccca
caaattgatggttccactctgcggaccttgtgcatgcagcatggccccctgatcacattc
cacctcaacctgacccaggggaacgctgtggtgcgctacagctccaaggatgaggccgcc
aaggcccagaagtctctgcacatgtgtgtgcttggaaacaccaccatcctagcggagttc
gctggtgaggaggaggtgaaccgcttctttgcacaaggccagtcgctaggggcaaacacc
actagctggcaggctaacccaggaaccaatcaaaaccggatgggggcagcacagtcccac
tctatgggccagtggagcagcggtggcggtggaggcaaggccagtggaggcgaccttctg
tggggcggggtgccccaatactcgagcctgtggggacctccaggcggggatgatgcccgc
gtgatcgggagccccacccccatcaacaccctgctgcctggtgatctgctcagtggggag
tccatgtag
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integrated database retrieval system
