Acanthopagrus latus (yellowfin seabream): 119017762
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Entry
119017762 CDS
T08233
Name
(RefSeq) polycystic kidney disease protein 1-like 2 isoform X1
KO
K04988
polycystin 1L2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119017762
04091 Lectins [BR:
alat04091
]
119017762
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119017762
Lectins [BR:
alat04091
]
C-Type lectins
Others
119017762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
SUEL_Lectin
Ion_trans
REJ
GPS
PKD
PrkC-like_PASTA-like
MalQ_N
TSNAXIP1_N
Motif
Other DBs
NCBI-GeneID:
119017762
NCBI-ProteinID:
XP_036950669
LinkDB
All DBs
Position
4:21370579..21388406
Genome browser
AA seq
2449 aa
AA seq
DB search
MTSHIRVLQRSFLSAQGWCERGGGHLAFILNDEIQQFLQKHLEPGKDWWLGLAPAAPNLT
LDSAASEGSLAWLDGSDVSYSNWQNSPDVHTACGHVLRHSGFQWEATGNCSQELNFICQF
DSGRSIACDGQNATLQCGSGQVIEIDDGFYGRKTIHYCQSKLTAAPTSSQEECSWIDVTD
SVTAHCHGLQACQAPVDVSSFGEPCPMLGSYLSIEYHCKHGLHLLMSKLAAVFDNVTITV
KWLLHPFQGNLTCKLNAGDGHTIDPYSPAEMESNVMHTFKRPGVFMVGVECSTSDWHVTA
QKSITIQEPVGEFGLIASYSRNMSTDGTKFNALHGRPVQIQVEVEAGTNVSYTIQHKGHV
VANSSVDTGITPHNITLSALVLEKLGHGCHNLTLTASNRVTSQPVSTGLELCLLEPVEGL
QASVTAEGDDCPDSTDLVIGVSLERGAPVELFFTLTGATDAISEPRDMLNGSFQAYTFSS
PLEGLLRVKVQAVNAFSTSDVDVDLKNILQACQNYSDRSPDDYDNATDTDDSHDLKMIAT
PDTLVDYTQSVTLSTTWTESLPSKGLTFDWKCRGECKCGNKTQGETRVVEKDCLPDPFDI
FIYAVIVRRTTWFRKSVKLAAASKCISVVLKEFTDVSISCDNCASVNVNNDVRLKLSCET
TCPEVVWHIEDPKPSMEDLHRCFSKAGRRPSIERQDGDTEYVVHSQHLKTSRETLHNISV
IAYSKTVPGFAKYTLPIPGPAPTEPAAPTAPTPPSCSISPGSGTVLDAFDITCKATSFCS
TGCSYCFKTDTGQHLRCSNANEVKSVFLPLGNESNNYSLSILVTVKNEYEEATATISTQV
RKSSSGTSVDILQSAVEDTVSQLEQQGLLSGEAIGQIFTSVSDMLNIEAGQDQKDARMKL
REQMLTRMTSVLLDSPSNTTQGVQVTARAVAGLTQRPDELSPAAQEEAGSLLVDLSSSLS
TVSVNQEDRDDGEVVQAATPIVEAASNILNVSSNKKVSEFLLTGINNVQSALLINKKLNG
EPAIIDSGQISVYVNRVSPGKMQTQDINVQKSSSSRFSFPTLPSHIVSPDEPVDVRMMSF
ETNPYSWKEDNITGAVGSVSLTRANGDLITVENLPEEIEILLPRLDVGQENSTVLDLANF
STLIIDVPSPDVTLVLKMEPSEDISFMLFLGYRDYPNDEIYVAKTQIPLENATDGEKYTW
VLSPKDRTGDVGVHYLVMKPIVDSGVKSVNATVNVISIAAQCKYWNETESSWSEDGCRVG
PLTTPLVTQCLCNHLTFFGSSFFVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFAVYVM
VVVWARRKDIQDSAKVKITVLEDNDPLAEYRYMLTFSTGHRHGAATSSQVTITLLGTEGE
SEPHHLTDSEKPVFERGGMDMFLLTTHFSLGDLQSIRLWHDNSGAHPAWYVNKVMVQDLE
SGQKWHFLCNSWLAVDVGECALDKVFPVATEIDLKRFSNLFFMKTAKDFRDGHIWFSVIS
RPPCSTFTRVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGIQS
SIIMFPINLLIVSIFRNTRPREKSTKADSASKQGKTVRVSPSQTSSPHKELKDITPDTVI
KDIKRIAQSLSKAMKSPLPELELRSGQPADINTLLSLVEDIIRQQNRAAGEFYSDASKRD
RSMILSLGAVNLQEDSVWGSPERTSDEAQKKSNNSRYLYRQLRHVEKELGLLGPSRFLNP
GSYNRAMQQVQGMKGLLEYRLPSSSLEGDQLDGSPSPEESINGDSAKKKCCQGGLPWWFV
FVGWILVIATSGVSGYFTMMYGLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFF
ALVLKKVDQEEYGEPQIDDSLRNTDDHDAVRAARRDSTCSFYQPPPPTDIERMRNNMIKE
QKVFALIREILVYMGFMWMLLLVAYGQRDPNAYFLTRHIRQSFSRDISDSMSIQDVFTWA
NTTLLSNLFGEHPGFITDGNSKLVGNARLRQVRVNKNSCPVAPSMQQPGRDCHAPYSWEL
EDMGSYGPGWSHYVADNASVDLNSPWAYQSQGKLRAYPIWGSVKLYRGGGFVVDLGSDSL
NSSKTLQHLHDNTWFDMYTQAIFVEFTVYNANVNLFCIVTLMLETTAIGAFQFRSELQSV
RLYQSTGGLHVFVMASEAIYFFFIIYYMFVQGKLMKQQRSAYFKSKWNLLELAIILLSWS
ALSVFIKRTLLGKRDIEYYQNHKDQYASFHETAKADAVLGYLIAFLVLLATIKLWHLLRL
NPKLHMITATLQRAWTDISGFLVVMTIMFLAYSIASNLMYGWKLYSYRTLLDAAQTMISL
QLGIFNYEEVLNYNPVLGAFLIGSCIVFMTFVVLNLFISVILVAFSQEQIHHKPSEEDEI
VDLMLMKLCSLFGLKFKQQGGDCLTERPDVSSASSNGLSMISSGNIRDG
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacacatccgggtacttcagcgatccttcctcagtgcccagggttggtgtgag
cgaggcggaggacacttggccttcatcctgaatgatgaaatccagcagtttcttcagaag
cacttggagccggggaaggactggtggctcgggctggcacccgcagctccaaacctcacg
cttgactctgctgcttcagaggggtcccttgcatggctggatggctcagatgtcagctat
agtaactggcagaacagtccagatgtacacacagcctgtggacatgtcctgagacattca
ggcttccagtgggaagcaacaggaaactgtagtcaggagctcaacttcatctgccagttt
gattcagggcgatctatcgcatgtgatggccaaaatgcaacactgcaatgtggttctggt
caagttatagagatcgatgacggcttctatggtcgaaaaacaattcactactgccagtct
aaactcacagctgcgcctacatcctctcaggaggagtgcagctggatagatgtcacggat
tcagtcacagcccactgtcacggactgcaggcttgccaggctccagtggatgtgagctct
tttggtgaaccgtgtcctatgctcggaagttacctgtctatagagtaccactgcaaacat
ggactccacctgttgatgagcaagctggcggccgtctttgacaatgtcaccatcaccgtg
aagtggctccttcatccttttcagggaaacctcacatgcaaactgaatgctggagacggc
cacactattgatccatacagcccagcagagatggagagcaatgtgatgcacacgttcaag
cgtcctggtgttttcatggttggagtggagtgcagcaccagtgactggcatgtcacagct
cagaaatccatcaccattcaggagcctgtgggagagttcggtctcattgcgagctatagc
aggaacatgtcaacagatggcactaaattcaatgctctccatggtagacctgttcagatc
caagttgaagtggaggcaggtacaaatgtttcctacacaattcaacataaaggccatgtg
gttgcaaactcatctgtggacacagggatcacaccccacaacatcacactgagcgccctt
gtgctggagaagcttggacatggctgccacaacctgaccctaaccgcctctaacagggtc
acatcccagccagtgtccaccggtctggagctgtgtctcctggagccagtcgaaggcctg
caggcgtcagtgacagcagagggagacgactgtccagactccaccgatctcgtcattggt
gtttcgttggagcgaggagcccctgtggagctgttcttcactctgactggagccacggac
gctatctctgagcccagagacatgcttaacgggagctttcaagcttatacattctccagc
ccacttgaaggattgttgagggtgaaggtacaagctgtgaatgccttctcaacctctgat
gtggacgtggacttaaagaacatacttcaggcttgtcagaattactctgaccggtcacca
gatgactatgacaacgcaacagacacagacgactctcatgacttgaagatgattgctact
ccagacactttggtcgactacactcagagtgtcacactgagcacaacttggactgaatcg
ttgcccagcaaaggactcacgtttgattggaaatgtagaggagaatgtaaatgtggaaac
aagacacagggtgagactcgcgtggtggaaaaagactgccttccagacccgtttgatatt
ttcatatatgctgtgattgtgaggagaactacctggtttaggaaatcggttaaacttgct
gcagcttcaaagtgcatctctgttgttctgaaggaattcacagacgtcagcatcagttgt
gataattgtgcttcagtaaatgtgaacaacgatgtaaggctaaaactgagctgtgagaca
acttgcccagaggtagtttggcatattgaagaccccaaaccttcgatggaggaccttcac
agatgtttctccaaagcaggtagaaggccgtctattgagaggcaggatggcgacactgag
tatgttgtacatagccaacatctgaaaacctcaagggaaacactgcacaacatcagtgtg
attgcttacagcaagacggtgccaggttttgccaaatacactttaccgataccaggtcct
gcaccaactgaaccagctgcacctacagcccccacccccccctcatgtagcatctctcca
gggtcaggaacagtcctcgatgcttttgacattacctgcaaagcaacctccttctgctcc
acgggatgctcttactgcttcaaaacagacacaggccaacatttacgctgcagtaatgca
aatgaggtgaaatctgtcttcttgcctctcggaaatgagagcaacaattacagtttgtct
attctggtgactgtgaaaaatgagtatgaggaagccaccgccacgatctccacccaggtg
cgaaaaagcagctctggcacctcggtggatattctccaatcggcagtggaggatactgtg
agtcagttggagcagcaggggctgctctccggcgaggccatcggacaaatatttacttca
gtttctgatatgttgaacatagaggccggccaagatcagaaggatgcaaggatgaagctc
agagagcaaatgttgaccagaatgacctcggttcttctggactcacccagcaacaccact
cagggagtgcaagtgacggccagagctgtggctggactcacccagcgtccggacgagctc
agtccagctgctcaagaagaagcgggctcgttgctggtggacctcagctcctccctcagc
actgtcagcgttaatcaggaagacagagatgatggagaagtcgtgcaagctgctacacca
atagtcgaagcagccagtaatattttgaacgtttcgtcaaataaaaaagtctcagagttt
cttctcaccgggataaacaatgtccaaagtgctttgctgattaataaaaagctgaacgga
gagcctgccatcattgattctggtcagatcagcgtgtatgtcaacagagtgtctccagga
aagatgcaaacacaggatataaatgtacagaagagcagctcctccaggttttccttcccc
acactgccttctcatattgtctctccagacgagccggtagatgtcagaatgatgagtttt
gagacaaatccatattcttggaaggaggacaacatcacaggagctgtcggatccgtctct
ctcaccagagcgaacggcgatctcattactgtagagaacttacctgaagagatagagatt
ctcttgccaaggcttgatgttgggcaagagaacagcacagtcctggaccttgccaatttc
agcacattaataattgacgtcccctcgccggatgtaacacttgtgctgaaaatggagccg
tctgaagacatttccttcatgctattcctgggatacagagattatccaaatgatgaaatt
tatgtggctaagactcagatccctctcgagaatgccacagacggggagaaatacacctgg
gtgctgagtcccaaagacagaacaggagatgttggagtgcactaccttgtcatgaagccg
attgtggattctggcgtcaaatccgtcaacgccactgttaatgtgatttccatcgctgcc
cagtgtaaatactggaatgaaactgagtcttcttggagtgaagacggctgcagggtcggt
ccactcaccacgcctctggtcactcagtgcctctgtaaccacttaactttcttcggcagc
tctttctttgtcatgcccaacttagtggatgtgtcacgcaccgcagaactctttgctact
ttcaccaacaatcctgtggtggtgtgttttgtgggggccatctttgctgtttatgtcatg
gttgttgtgtgggcgcgcaggaaagacatccaggactcggccaaggtcaagataacagta
ctcgaggataacgacccgttggctgagtatcgatacatgctaactttcagcacagggcat
cggcatggtgcagccacctcctctcaggtgacgataactcttctgggtacagaaggggaa
agtgagccccaccacctgacagactctgagaagccagtgtttgagaggggtgggatggac
atgtttctgctgaccacacacttctccctgggagatctgcagagcatcaggctgtggcat
gacaactcaggagctcaccctgcatggtatgtcaacaaagtgatggtgcaggatctggag
agtggtcagaaatggcacttcctgtgtaactcctggctggctgtagatgtgggagagtgt
gctcttgacaaggtcttcccagttgcgacggagatagatttgaagaggtttagtaacctg
ttcttcatgaaaacagcaaaggatttccgtgacggccacatctggttctctgtcatcagt
cggcccccctgcagcactttcacgcgtgtgcagcgagtctcctgctgtttttccctgctg
ttgtgcacaatgctcaccagcatcatgttttggggcatccctactgacccctctgagcag
accatggacctgggtcacatcgagttcacctggcaacaagttatgattgggattcaaagt
tcgatcatcatgtttcctatcaatctcctcattgtgagcatcttcagaaacactcgtcct
cgagagaagtccaccaaagcagattcagcatctaaacaggggaagactgttcgggtctct
ccctcacagacttcttcccctcataaagagctgaaagacatcacaccagacactgtgatc
aaggacattaagaggattgctcagtcactgtcgaaggccatgaagagtccactgccagag
ctggagctccggtctggtcagccagctgacatcaacactctgctgtctctggtggaggac
atcatcagacagcagaaccgcgcggcaggagaattttacagtgacgcctccaagagggac
cgctctatgatcctcagcttaggtgcagttaatctacaagaagacagtgtgtgggggagc
cctgagaggacttcagatgaagctcagaagaagagcaacaacagcaggtacctgtacagg
cagctgcgtcacgttgagaaggagctgggcttgttgggaccttctcgttttttgaaccca
ggcagctacaacagagccatgcagcaggttcagggaatgaaaggtctcctggagtaccgg
ctcccctcgtccagcctggaaggagaccagctggacggcagccccagtccagaggagagc
atcaatggagactcagccaaaaagaagtgttgccaaggagggctgccgtggtggtttgtg
tttgttggctggatactggtgatcgcaaccagcggtgtgtcgggttatttcaccatgatg
tacgggcttacgtacgggaaagaccgctctataagctggcttatctccatggtggtatcc
ttctttgagagtttgtttatcactcaacctctgaaggttcttggttttgctgctttcttt
gctctcgttctgaagaaagttgaccaggaagagtatggagagcctcagatagatgatagt
ctgagaaatacagatgatcatgacgcagtgcgtgcagcaagaagagacagtacctgcagt
ttctatcagccgccacctcccactgacattgagaggatgaggaacaacatgatcaaagag
cagaaagtctttgccctaataagggagattcttgtctacatgggatttatgtggatgttg
ctcctggtggcgtatggtcagagggaccccaacgcttactttctgacccgacacatccga
cagagcttcagcagagacatctcagatagtatgagtattcaggatgtgtttacctgggca
aacacaactctgctgagcaacctgtttggagagcacccagggttcatcacagatgggaac
tctaagctggtgggtaacgctcgtctccgccaggtgagggtgaataagaactcctgccct
gtggctccatccatgcagcaacctggacgagactgccatgctccgtactcatgggagctg
gaggacatgggctcctacggtccaggctggagccactatgtggctgataacgcctcagtt
gaccttaatagcccatgggcgtaccagtcccagggtaaactgagggcgtaccccatctgg
ggtagcgtgaagctttatagaggaggaggctttgtggtggatcttgggtcagattcacta
aattcaagcaaaacccttcaacatcttcatgacaacacctggtttgacatgtacacccag
gcaatcttcgtggagttcacagtgtacaacgccaatgtcaacctcttttgcatcgttact
ctcatgctggagaccacagccatcggagctttccagttccgcagtgagcttcagagtgtg
cgtctttaccagtcgaccggcggccttcacgtctttgtcatggcctctgaagccatctac
ttcttttttatcatctattacatgtttgtccagggaaagctgatgaagcagcagagatct
gcttatttcaagagtaagtggaacctgctggagctggctattatcctcctcagctggagc
gcgctgtctgtcttcatcaagaggaccttactaggaaagcgggacattgagtactaccag
aaccacaaagaccaatacgccagtttccatgagacggccaaggctgatgcagtgctcggg
tatctgattgccttcctggtgctgctggctacaatcaaactgtggcacctgctgagactg
aacccaaagctgcacatgatcacagccacgctgcagcgagcctggactgatatttcaggc
ttcctggtggtcatgaccatcatgttcctggcgtactccattgcttctaacctgatgtat
ggctggaagctttactcctacaggactctgctggatgcagcacaaaccatgatcagcctg
cagcttgggatttttaactatgaagaggtgctgaattacaatccagttcttggggccttt
ctcattggctcctgcatcgtgttcatgacctttgtggtgctgaatctcttcatctctgtc
attctggtggctttcagtcaggagcagatacatcacaagccatcagaagaagatgagatt
gtggacctgatgctgatgaaactgtgcagtttgtttggactcaaatttaagcaacaaggt
ggcgactgcctaactgagaggccagatgtttcatctgcttcgagtaatggactctcaatg
atttcttctgggaatattcgtgatggttaa
DBGET
integrated database retrieval system
