Acanthopagrus latus (yellowfin seabream): 119017986
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Entry
119017986 CDS
T08233
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04350
TGF-beta signaling pathway
alat04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119017986 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119017986 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119017986 (neo1a)
Cell adhesion molecules [BR:
alat04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119017986 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
fn3_2
C2-set_2
Fn3_Dep-1_3rd
Unc5_NetrinR_N
Sp38
K319L-like_PKD
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
119017986
NCBI-ProteinID:
XP_036951135
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All DBs
Position
4:6270488..6441099
Genome browser
AA seq
1508 aa
AA seq
DB search
MAERGALSLLSLLCLTSLYTETTAAKHVDKGSAAQPFSPFWFTVEPQDTLAIRGNSALLN
CSAHSDAATAARIEWKKDGTFMSLVSDERRNILPDGSLFFNHVVHSKHNKPDEGTYQCVA
TIDNLGSISSRTARLSVAGMPRFASQPSAATAHQGDNQVMACEVNSDLVPFTRWEKDRQP
LELSTRLVQLPGGALAISNASETDAGLYRCLVENVGSSKSSDEAQLQIVPETGEERKPEF
LVQPAAVTKVVGASVLLPCVVTGYPTPRVRWMFGDKQLEESDGRVELLGGGSLQISNLTE
EDAGVYTCMVDNANTSIEAQSLLTIQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDV
ALPSFPPPSLTPNTTDHVTPGSGGVASPAGPTPSAPRDVVASLVSTRFIKLTWRPPAEPH
GDDLTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGPGESSAA
LKVATQAEVQVPGPAPNLQATSNTPSSVSLSWDKPVTGNGDIVTYKLYYTDKSVGNEEDV
DIDGQSYTLTGLKKNTEYSFRVVANNKHGPGVSTEDIVVRTLSDVPSAPPQNLTLEVQNS
KGIMLRWQPPPLSGQNGEITGYKIRYRKGSRRSETSEITGGTQLFKLITGLERGTEYSFR
VSAMTVNGTGPATEWTTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAITR
PQSDPIDPDVDLYELFHAPYTPVPDPTPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKI
TDNRFYTVRWKTNIPANTKVKMANTTSLNHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQA
SNVPPKHGPQGHPPQDPVNGVGKSGVGGSENHILVIIIIISVGAFTIIVVVVGAFLCTRR
TTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTETPI
PRTSQDITPADSSLDNNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQP
VISAHPIHSLDNHHHHYHMGSLVSPTRSYLYHQGSGHPRPHACASPISHLDRVDSTESVR
NTPSSEPLPPATASSQASCPSEIMADPEGSYHGSTTTEEEPSYSSNLPPHRPAHPHAHAH
PLKSFAVPAIPATGHPTYESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRTPMIVTV
PNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKD
LNAITTAP
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctctctctacacg
gagaccaccgcggcaaagcatgtagacaaaggttcagcagcgcagcccttcagccccttc
tggttcacagtggagccgcaggacacactggccatccgggggaactcggcactgctcaac
tgttcggcccacagcgacgcagctacagcggcacgcatcgagtggaagaaagacggcacc
ttcatgagcctggtgtcagacgagaggcgaaatatacttcccgatggctcgctgttcttc
aaccacgtggtccactcaaagcacaataagcccgacgaggggacctatcagtgcgtcgcc
acgatagacaacttgggatccatttccagccgcacagcccgtctgtctgtagcagggatg
cccaggttcgccagccagccgtcagcggccactgcgcatcaaggggacaaccaggtgatg
gcatgtgaagtcaactcagatctggtgcccttcacccgttgggagaaagaccgtcagccg
ctggagctgagcaccaggctggtccagctgcccggtggagccctggcgatcagcaacgcc
tcagagactgacgctggcctttaccgctgtttggtagaaaacgtggggtcgtcaaagtcc
agcgacgaggcccagctgcagatagtgccagaaactggagaagagaggaaaccggagttc
ctggtgcagcctgcggctgtgacgaaggtggtaggcgccagcgtgctgctgccctgcgtg
gtcaccggttaccctacgccgcgtgtccgctggatgtttggagacaagcagctggaagag
agtgacggccgtgtggagctgctgggaggaggaagtctccagatctccaatctcacagag
gaggatgccggcgtctatacctgcatggtggataatgccaacacaagcattgaagcgcag
tccctcctcactatacaagttcctccccagtttgtcaagcggccggccaacatctacgcc
cacgagtccatggacatcgtgtttgagtgcgaggtctcagggtcaccagctcccactgtc
aagtgggtcaagaatggagatgctgtcatccccagcgactacttcaaaataattaaggag
cacaatctgcaggttctgggtctcgtcaagtcagatgagggtttctaccagtgccttgcg
gaaaacgatgctggcaacatccagtctagtgcccagctcatcatcttagatcacgacgta
gccctgccctctttccctcccccttcactgactcctaacactactgaccatgtaacgcca
ggctccggaggtgtagccagtcccgcaggccccaccccctcagccccacgagatgtcgtg
gcttcgctggtttcaacccgcttcatcaaactgacctggcgcccgccggctgaaccccac
ggagatgacttaacctactccgttttctacagccaggagggcactagcagggagcgagta
gtgaacaccagccgtccaggggagatgcaggtcaccatccagaacctgatgccagacacc
aaatatcgcttcagggttgttgcccacaacagcaacgggccgggagagagctctgcagcg
ctaaaagtggccacccaggctgaagtccaagtgccgggccctgctccgaacctgcaggcc
acgtccaacacgccatcctcagtgtctctgagctgggacaaacccgtcactggcaacgga
gacattgtcacatacaagctgtactacacggacaaaagcgttggcaacgaagaggatgtt
gacatagacggtcagtcgtacacgctgactggcctgaagaagaacacagagtacagtttc
cgtgtggtggccaacaacaagcacggtccaggcgtctccacggaggacatcgtagttcgc
accctgtctgacgtaccaagtgctcctcctcagaacctcactctggaggtccagaactca
aagggcatcatgcttcggtggcagcccccgccccttagcggccagaatggggagattacc
ggctacaagatccgataccggaaagggtcccggaggagtgaaacatctgaaatcactgga
ggcacccagcttttcaaactcatcaccggtctggagcgtgggacggagtactccttcagg
gtgtcagctatgacggtgaacggcacgggaccggccacagagtggaccacggcagagaca
tttgagagcgacctggacgaatctcgtgtaccagaccagcccagctctctccacgtccgc
ccactggtcaacagcatcgtggtgagctggacgccgccggagaaccaagacatcgtggtg
cgtggttacaccatcggctatggcatcggcagtccccacgctcagaccatcaaagttgac
tacaagcagcgctactacaccatcgagaacctcgacccaagctctcactatgtgatcaca
ctgaaggccttcaacaacgtaggcgagggcattcctgtgtatgagagcgccatcaccaga
ccacagtcagaccccatagaccccgatgttgacctctacgaactcttccatgctccatac
accccagtaccagaccccactcccatgatgccgcccgtgggcgttcaggcctctgtgctg
agccacgacaccatcaaggtgacctgggccgacaactcgctgccgaagaaccaaaagatc
acagataaccgcttctacacggtgcgctggaagaccaacatccctgccaacaccaaagtg
aagatggccaacaccaccagcctgaaccacatggtgacgggcctgaagcccaacacactg
tacgagttctctgtcatggtgaccaaaggacgccgcaccagcacgtggagcatgactgca
cagggcaccacctttgaaaccattcccagctcttccccgaaagacgtgacggtggtgagc
aaagagaacaaacctcgcaccatcatcgtcaactggcagcctccctccgaggccaacggg
aagatcaccggttacataatttactacagcacagatgtaaacgctgaagtccacgactgg
gtgattgaaccagtggtaggtaaccgtctgacccaccagatccaggagctgacgctggac
accacctactacttcaagatccaggcccggaactcaaagggcatgggcccgatgtctgag
gccgtacacttccgcactcctaagactgagtcctctgacaaaatggctaatgaccaagcc
tcaaatgttccaccgaaacatgggcctcagggacacccaccacaggaccctgtcaatgga
gttggtaaatcaggggtgggaggcagtgaaaatcacatcctggtcatcatcatcatcatc
tcagtgggagccttcaccattatcgttgtggtagtcggggctttcctgtgcacccgccgc
accacgtcccaccagaagaaaaagcgggctgcctcaaagtcctcaaatggctcccacaaa
tacaagggaaactccaaagacctgaagcctccggatctctggattcaccacgagaggctg
gaactgaagcccatggacaagtcgccagaccccaacccagtcatgacagaaacgcccatc
ccccgcacctcgcaggacatcacgccggccgatagcagcctggacaacaacccccacctg
cagcagcggcgcaactcctaccgtggccacgaatcagaggacagcatgtctacactagca
ggccgacgagggatgaggcctaaaatgatgatgccttttgactcacagccgcctcagcct
gtgattagcgctcaccccatccattcccttgataaccatcaccaccattatcacatgggc
agcctggtgtcaccaacacgcagctacctctaccaccagggcagcgggcaccctcgcccg
catgcctgcgcctcccccatctcccatctagacagggtggactctacagagtcggtgagg
aacacccccagctcggagcccctccctccagccaccgcctcctcccaggcctcctgcccc
tcggagatcatggccgaccccgagggcagctatcacggctccaccaccacagaggaggag
cccagctactccagcaacctgccccctcaccgcccagctcacccgcacgcccatgcccac
ccgctcaagagctttgccgtacctgcgatcccagccaccggtcatccaacgtacgagtcg
cctgccctgcccagcactcccctgctggctcagaccgggcctcccactcaccctcatgtc
gttaaaacagcctctatcggaacgctaggaaggacacgaacaccgatgatcgtcactgtg
cccaacgcccccgatgtgccagagaccagcaagatgttggaggatgtagacagcgtgctt
gcctccctccccccctgcccctcccccgccccccgcagtaaccctgttcctctccctcag
agctacgagcccgacgagttgaccgaggagatggcccacctcgagggcctcatgaaggac
ctgaacgccatcaccacagcgccatga
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