Acanthopagrus latus (yellowfin seabream): 119017996
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Entry
119017996 CDS
T08233
Symbol
fn1b
Name
(RefSeq) fibronectin 1b
KO
K05717
fibronectin 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04810
Regulation of actin cytoskeleton
alat04820
Cytoskeleton in muscle cells
alat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119017996 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119017996 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119017996 (fn1b)
04810 Regulation of actin cytoskeleton
119017996 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119017996 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119017996 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119017996 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119017996 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119017996 (fn1b)
Membrane trafficking [BR:
alat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119017996 (fn1b)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
119017996 (fn1b)
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119017996 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
119017996 (fn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
Interfer-bind
FN3_Tor_3rd
Fn3_Dep-1_4th
fn3_2
DUF5979
Motif
Other DBs
NCBI-GeneID:
119017996
NCBI-ProteinID:
XP_036951168
LinkDB
All DBs
Position
4:complement(15275962..15298850)
Genome browser
AA seq
2464 aa
AA seq
DB search
MTGSPLTGLLVALCVSSAVHGLPKKSKRQTGQYQVFPELRDASAVAQVACEENGRSFRQN
EQWEKPYLGSTLVCTCNGAAGIKCKTKPEVEESCYDKYNDRTYRVGETYERPKDGMMWDC
TCIGSGRGKISCTIANRCHEGGRSYKIGDTWQRPHDTADYMLECVCLGNGKGEWTCKPVA
ERCYDNNAALSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDQDTRRSYRIG
DTWTKPDASGHILQCQCLGNGRGEWKCERHNAGRTTGAVVLAPTHTRQQPEMPIEGTCRT
DSGATYYDGQRWLRSQGNKQMLCTCLGNGVSCQEWEARNQAYGGNSNGQPCVFPFVFMGK
TYYSCTSDGRTDGQLWCSTSSDYEKDQQYSFCTEKNAIVATRGGNSNGALCHFPFLYSGR
NYTDCTSDGRRDGMRWCGTTHDYDTEQRYGFCPMAAHEELCTTNDGLMHRVGDKWDKRHE
IMGHMMECTCLGNGRGEWSCVAYSQLRDQCIVDGLYYEVNQEFSKRHNDGHMMNCTCYGQ
GRGRWKCDAIDQCQEPQTRAFYQIGESWDKVIHGIHYRCYCYGNGIGEMRCEPQQTYPDG
HRPIQVIITEAGKQPDSHPIQWNPPSSVHITQYILKWRIKNSHSPWKEATIPGNFNSYTI
SGLRPGATYEGQLISILRYGRREVTRFDFTTTHGSLETSEGETNVPPPVLDTSESVTEIT
SNSFVVSWTSASSTISGFRVEYELSEDGAKPQVLDLPRTATSVTIADLLPGRRYNVNVYE
LPDQGQPNLILTTSQTTAPDKPARHAVDEVGEKSIRISWSRPQAPITGYRVVYTPSLEGS
STELNLPESVTSVTLADLRPGLLYNISIYAVEDDLESEPAFVQVNTAGSPLPEVVPAPTE
LQFYEVSDVKITITWTGPPSEVTGYRVTYSPIGTDGRELRPLQMPISPNAYADITHLQPG
TLYRFYIYAINGGVESEPLVGDKSTKPDSPTDVRFTDVGHDSALVIWQAPRAIVTGYRLF
LSIEGSTPVEKRIPGGVNQYALRNLRPDTRYTAVLHSELDNELSEGVTSYFETTPQMGNA
PPFSTEVTDTSIIVTWIPVRRFSYKLSVLPSQEGESPREDTSDSGQIQILGLIPGTQYTY
SVQPIFNGRNRGNPITRNVVTSLSPPTDLRVESNPSTGDLTVHWVASRTPGITGYRVTST
PTSGQRGNSLEEFVRADETSCVLESLNPGAEYNVSVFTTKGHLESVPVSTIITPDILPPN
HIDFVDITDTTIGLRWIPPKNATTASYLITVVASGEGLPIFQDMVRAAAGYYRIHGLEPG
VDYDISIFAVSDGRASRPTTYRILTQDVIPAPTNLQFGGVGPDHIRVTWTVPNVAAPSDI
SRFVIRYHPVATDDDVKEVNVGGATNTFLLQNLLPNTDYHISVVLVYGERESQPATGTQR
TTLDSPTGLDFSDIRTNSFTVHWLAPTSVITGYRIRYQKTSGGRPKDERLPPSRNYFTLT
GLTPETEYLVHVYAVSNGQDSLPLTGTQATISDAPTDLEVTSSTPTSITIRWEAPSVTVK
NYRITYAGERGERPQEFSIPGTQTTATITGLNPGTDYTITVYAVTGRGDSPASNTPVYIT
HRTGTEPPTDMKLTDVSDNTITVRWSPAQGPIRGYRITGVPKNGLGPSYSEVVAPDQREM
TFTGLMPTAEYVVSVYALGSNGQPSSPVVGNAITAMDRPKDLTFSDIDSTSMRITWDSPD
GTVTSYRILYSSPEEGERELRPAPRGDQDSVLLRGLRPGTEYTIKVIALHDRTPSKPLVG
TQATVIPTPTNLMISEVGPSAFTVSWRAPNARLTGYRVVVNPKNINGPPREMNVAPDTTR
VVVPGLMVATTYQISVYALKNSVTSRPLEGEATTLEDVSPPRRVRISDTKDTSFTLTWRA
KPSDTITGYLIEATPMTGSHPAIRRNFPAPTETYTFTGLQPGTRYHVKLYTLSGNTRSAP
FTLTIETEKPVVQAPTGLHFTSFTPTSISFTWQPPATHITGYYISYEEQGGQPRELIPRP
HAGQNYATISGLRPATEYTIKIIAIQNTQRSSPLVGRARTQPDLLVLPLPNRPGGSGDRL
DVPEDTTVQVVGNGGTDGQGGQSQHVEYTEYNNNNNGDNNRYSGNSGNPQSPYGQVREPL
VFLPLPDAEGRRLPILKLNLPIGATFDNETDLPQEVQTQTSISWKPYSQSNAYLVSCSPL
THLEEKMFQVRLPGTATTATLIGLTPGANYNVIVEALLGALKHKILEQVVTAGNTIPEGV
PSDKDSCYDAFTATYHDVGSEWERMSETGFKLWCRCLGLGSGHFRCDSSKWCHDNGNNYR
IGEKWDRRSENGQLMSCTCLGNGKGEFKCEPHDSVCYDDGKTYQVGNQWQKDYLGAICTC
TCFGGQQGWRCENCRRPGADVDAGLLQPVRYGDNTLRRTNIHCPIECLRPELLADAHVPP
NPRE
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atgactggtagcccgctgacagggttactggttgcgctgtgcgtcagcagcgcagtgcac
ggcttgccaaagaagagcaaaagacaaaccggccagtatcaggtgtttcctgagctccgt
gacgcgtcggctgtggctcaagtcgcctgtgaagaaaacggtcgatcgttcagacagaac
gagcagtgggagaaaccctaccttggtagtacactggtgtgcacctgcaatggagccgct
ggcatcaaatgtaaaactaagcctgaagtggaggagtcatgttatgataagtacaatgac
cggacataccgagtcggtgagacctacgagaggccaaaggacgggatgatgtgggactgc
acctgcatcggctctggtcggggcaagatcagctgtaccatcgccaatcgttgccatgaa
ggagggaggtcttataaaatcggggacacttggcagaggcctcatgacaccgctgactac
atgctggagtgtgtgtgtctcggaaacggcaaaggggagtggacctgcaaacctgtggct
gagcgttgctacgacaacaatgccgcgttatcgtacgtcgtgggggagacctgggagaaa
ccgtaccaaggctggatgatgctggactgcacctgtctgggagagggaaatggacgcatc
acctgcacctcaaggaaccgctgcaacgaccaggataccaggaggtcgtaccgcattgga
gacacatggacgaagccggacgcaagcggacacatcctgcagtgtcagtgcttaggaaac
ggccgtggagagtggaagtgtgagagacacaacgcaggcagaaccacaggcgccgtcgtg
ctggcccccacccacactcggcagcagcccgagatgccaatcgaggggacgtgccgcaca
gactctggagccacctactacgacggacagcgctggctcaggagccagggcaacaagcag
atgctctgtacctgtctgggcaacggagtcagctgtcaggagtgggaggccaggaaccag
gcgtacggtggcaactccaacggtcagccttgcgtgttcccgttcgtcttcatgggaaag
acctactactcctgcacctcggacggacgcacagacgggcagctctggtgctctacaagc
tcagactatgagaaagaccagcagtactctttctgtaccgagaagaacgccattgtggca
acacgaggtggaaactccaacggcgctctgtgccacttccccttcctctacagtggccgc
aactacaccgactgcacctctgacgggcggcgtgacggcatgagatggtgcggcaccacc
cacgactacgacacagagcagcgctatggattctgccccatggctgcccatgaggagttg
tgcaccaccaacgatggattaatgcatcgtgtaggagacaagtgggacaaacgccatgaa
atcatgggtcacatgatggagtgcacatgtctcggcaacggccgtggggagtggagctgc
gttgcgtattcacagctgcgagatcagtgcattgttgacggcttgtactacgaggtaaac
caggaattctccaaacgccacaacgatggccacatgatgaactgcacctgctatggacag
ggacgtgggcgctggaagtgcgacgccatcgatcagtgtcaggagccacaaaccagggcg
ttctaccagatcggagagtcatgggacaaggtcattcatggcatccactaccgctgttat
tgctatggcaacgggattggagagatgagatgtgaacctcagcagacctacccagacggc
cacagacccatccaggtgatcatcaccgaggcgggaaaacaaccagactctcaccccatt
cagtggaacccgccttcatccgtccacatcacccagtacatcctcaaatggaggattaaa
aatagccattcgccttggaaggaagccaccatccccggcaacttcaactcctacaccatc
agtgggctgcgtccaggcgccacctacgaggggcagctgatcagcatcctgcgctacggc
cgccgcgaggtcacgcgctttgatttcaccacaacccacggttctctggaaacctctgag
ggagagacgaacgtccctcctccagtgttggacacctctgagtcggtgacagaaatcacc
tccaacagcttcgttgtgtcctggacctcggcctcttctaccatctcaggcttcagggtg
gagtatgagctcagtgaagacggtgccaagccgcaagtcctggatcttcctcgcacagcc
acctccgtcaccatcgctgacctcctgccaggacgcagatacaatgtcaacgtctacgag
ctcccagatcagggacagccgaacctcatcctgaccacctcccagaccacagctcccgac
aagcctgctaggcatgcagtcgatgaggtgggagagaagtccatccgaatcagctggtcc
cggcctcaggctcccattactggttaccgtgtggtgtacacaccgtcgctggaaggcagc
agcaccgagttgaacctgccagagtcagtgacctcagtgaccctggctgaccttcgcccc
ggtctcctttacaacatcagcatctacgctgtggaggacgacctggagagtgagcctgct
tttgtgcaggtcaacaccgctgggtctcctctgccagaggtggtaccggcgcccacggag
ctgcagttctacgaggtttcagatgtgaagatcaccatcacctggactggtccacccagc
gaggtgactggttacagggtgacctactcccctattggcaccgacggcagagagctcagg
cccctgcagatgcccatttcaccaaacgcctatgccgacatcacccacctgcagccgggc
acgctgtaccgcttctacatctacgccatcaatggcggagtggagagcgagccgctggtg
ggagacaagtccaccaagcccgactcgcccactgatgtgcgtttcaccgacgtcggccac
gacagcgcgttggtcatctggcaggctccccgcgccatcgtcaccggctaccgtctcttc
ctcagcatcgagggctccacccctgtcgagaagaggatcccgggtggggtcaaccagtac
gctttgaggaacttgcgtccagacaccagatacaccgcagtcctccactctgagctggac
aacgagctcagcgagggcgtcacgtcatattttgaaaccactcctcagatgggaaatgct
cctcctttcagcactgaagtgactgatacctctatcattgtcacctggatacctgtccgc
aggttcagctataagctgtctgtcctccccagccaggaaggcgagtctcccagagaagat
acctctgactctggacaaattcaaattctcggcctgattcctggaactcagtacacctac
tctgttcagcccatcttcaacggacgcaaccgtggaaaccccatcacccgcaacgtcgtc
acttccctgtctcctcctactgacctcagagttgagtcaaatccaagcacgggagatctc
actgtccactgggtcgcctccagaacaccaggcatcacaggctacagggtgaccagcacg
ccaaccagcggccagcgaggaaactccctggaagagtttgtccgagctgatgaaacctcc
tgcgtgctagagagcctgaatcccggggcagagtacaacgtcagtgtattcaccaccaag
ggtcatttggagagtgtgcctgtgtccacgatcatcacaccagacatcctcccaccaaat
cacattgactttgtcgacattaccgacaccaccattggcctccgctggatccctccgaaa
aatgctaccactgcttcttacctgataacggtagtagcgtcaggcgagggcttgccgata
tttcaggatatggtgcgagcagctgctggttattacaggattcatggtttggagccgggc
gtggactatgacatcagtatcttcgctgttagcgatggccgggcaagcaggccgaccaca
tacagaattctaacacaagacgtcattccagcaccaaccaacctgcagtttggaggggtg
ggtcctgaccacattagggtgacatggacagtccccaatgttgccgcaccaagtgacatc
tctcggtttgtcatccgttaccaccccgtggccacagatgatgacgtcaaggaggttaat
gttggcggggcgaccaacacgttcctgctgcagaacctgctgcccaacactgactaccac
atcagcgttgtcttagtgtatggtgaacgggaaagtcaaccagccacagggactcagagg
acaactctggactccccgactggcttggacttctctgacatccgcaccaactccttcacc
gttcactggctggctccgacttctgtcatcaccggctaccgcatccgctaccagaaaacg
agcggcggacggcccaaggatgagaggctgcccccaagcaggaactacttcactttgacc
ggactgacacctgagacagagtatctggttcatgtgtatgctgtcagcaatggccaggac
agtctgcccctgactggcacacaggccaccatctccgatgctcctactgaccttgaggta
acatcgtccacgcccaccagcatcaccattcgctgggaggccccctcggtcacagtgaag
aattacaggatcacctatgcaggagaacgtggtgagcgtcctcaggagttctcaatccca
ggcactcagaccactgccaccatcaccgggctgaaccctggtactgactacaccatcact
gtctatgctgttactggaagaggggacagccctgcctccaacaccccggtctacatcacg
cacaggactggtaccgagccccccactgacatgaaactgactgacgtgagtgacaacact
atcacagtgcgctggtctcctgctcagggaccaatcagaggctacagaatcaccggtgtt
cccaaaaatggcctgggaccctcctactctgaggtggtggcccctgatcagagagagatg
acattcacaggtctgatgcccactgctgagtatgttgtgagtgtctacgctctgggcagt
aacggacagccctcttcccctgtggtcggaaatgcaatcactgctatggaccgtcccaaa
gacctgaccttctccgacatcgactccacctccatgcgcatcacttgggacagtccagac
ggcactgtgacatcataccgcatcctgtactccagcccagaggaaggcgagagagagctg
cgtccagcacccagaggagaccaggacagtgtgctgctgagaggtcttcgccccgggaca
gagtacaccattaaagtcatcgccctccacgaccgaactcccagcaaaccgttggtggga
acccaggccacagtgatccctactccaaccaacctgatgatctcagaagtcggtccctcc
gccttcactgtgtcatggcgagcccccaatgcacgcctgacaggctaccgtgtggtcgtc
aaccccaagaacatcaacggcccccctagagagatgaacgttgctccggacaccacgcgt
gtcgtcgtaccagggctcatggtggcaacaacttaccagatttccgtctacgctctgaag
aactctgtcaccagcagaccgctggagggggaggcgaccacactggaagacgtaagtcct
cctcggcgcgtgcgtatctctgatacgaaggatacgtctttcacactgacctggcgcgcc
aaaccatcggataccatcactggttacctcatcgaggccacaccgatgactggctcacat
cccgccatcagaaggaacttcccagcacctacagagacctacactttcacaggtctgcag
ccaggcaccaggtaccacgtcaagctgtacactctgagtggcaacacgaggagcgcccca
ttcactctgactattgaaacagaaaaaccggtggtccaggctcccaccggcctccatttc
acatctttcacccccacctccatctccttcacctggcagccacctgccacacacatcaca
ggatactacatcagttatgaggagcagggaggacaaccacgtgagctcatcccacgaccc
cacgctggccaaaactacgccaccatatccggcctgagaccagccaccgaatacaccatc
aagatcatcgccatccagaacacgcagaggagcagccctctggtgggaagagccagaact
caaccggacttgcttgtcctgcctctgcccaaccgccccggaggttccggtgacaggttg
gacgtgcccgaggacaccacagtccaggtagtgggcaacggtggcacggatgggcagggt
ggtcagagccagcatgtggagtacacagagtacaacaacaacaacaacggagacaacaac
agatatagtgggaacagtggcaacccacagtccccctatgggcaagtacgtgagccgctg
gtgtttttgccccttcctgatgcagagggccgcagactgcccatcctgaagctgaacctg
cccatcggcgccacgttcgataacgagacggatctgccccaggaggtccagactcagacc
tccatctcctggaagccttacagccagagcaacgcctacctggtgtcctgctctcctctc
acacacttagaagagaagatgttccaggtccgcctgccaggcacagccaccactgccacc
ctgataggactcacacccggagccaactataatgtgattgtggaggctctgctgggtgcg
ctcaaacacaagattctggagcaggtcgtcactgctggaaacacaatcccagagggagtg
ccctccgataaggactcatgttatgacgccttcaccgcaacctaccatgatgttggtagt
gaatgggagcggatgtctgagaccggcttcaagctgtggtgcaggtgtctgggcctgggc
agtggccacttcagatgtgactcatctaagtggtgccatgacaacggaaacaactatcgc
atcggagagaagtgggaccgccgctcagaaaacggtcagctgatgagctgcacttgtctg
ggaaatggcaaaggagaattcaagtgtgaaccacatgattcagtgtgctacgatgatggc
aagacataccaggtgggaaaccagtggcagaaggattacctgggcgccatctgcacctgc
acatgcttcggaggacaacagggctggcgatgtgagaactgccgcagaccaggtgctgat
gtcgatgctggtctgcttcagcctgttagatatggagacaacacactacgcagaacgaat
atccactgccccatcgagtgcctccgacccgaactgctggcagacgcacacgttcctcca
aatcctcgcgagtaa
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integrated database retrieval system
