Acanthopagrus latus (yellowfin seabream): 119017999
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Entry
119017999 CDS
T08233
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119017999 (ddx21)
03036 Chromosome and associated proteins [BR:
alat03036
]
119017999 (ddx21)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119017999 (ddx21)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-60S particles
Helicases
119017999 (ddx21)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
119017999 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119017999
NCBI-ProteinID:
XP_036951174
LinkDB
All DBs
Position
4:complement(25425663..25433631)
Genome browser
AA seq
753 aa
AA seq
DB search
MPTKITFDTEDQAMEDIVDTAAEAKILKAKNKEAKKLKKKQQLEDQEQQEDPDCEPPAPK
KKKKKDKLAEDQVNGHTDEADMNGNSNGVETPKKKSKKEKTEGDSEKKKKKQKKAIAEEA
TNGHSTPNTPVQTPIQTPAQSSEESASDSEKEPEETPEQKEGAFSNFRISQVTINKLKAR
GVSYLFDIQAKTFNPVYDGEDVIAQARTGTGKTFSFAIPLVEKLQGNMTEFARGRSPKVL
VLTPTRELAIQVAKDFKDVSKRVSIACFYGGSSYMPQIEAIRNGIDVLVGTPGRIKDHLQ
NNKLDLSKVKHVVLDEVDQMLDMGFAEQVEEILASSYHKDSDSNPQTLLFSATCPPWVYE
VAKKYMRPGCKHVDLIGKKTQKAATTVEHLAITCHWSQRTAVLADVIQVYSGSHGKTIVF
CETKKDANELSLNSSLKQSAQSLHGDIPQKQRETTLKGFRNGAFEVLVATNVAARGLDIP
EVDLVIQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVG
VPTANDIIKSSSKDAVRFLDSVPATAIDYFRVSAEKLIAERGAVDALAAALAHISGATSL
EQRSLLNSDAGYTTVQLVCSQECHNLGYVWRTIKEQLGEQFENHIHRMTFLKGKMGVCFD
VPVDKVKEMQDNWKDGRRWQLTLATELPELEEKQFNNRGDRGFGGGNRGGGFRGGRGRSF
GGFRNSGGGGGGRGGYGNNRGGHKRNFSQAFDY
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaaaaatcacatttgacaccgaagaccaggccatggaggacatcgtggacact
gctgcagaggctaaaatcctgaaggccaagaacaaggaggccaagaagctgaagaagaag
cagcagctggaggaccaagaacagcaggaggacccagactgtgaacccccagcacctaag
aagaaaaagaaaaaagacaagctggcagaggaccaagtgaacggccacacagatgaggca
gacatgaatggcaacagtaacggtgttgaaacaccaaagaagaagagtaagaaggaaaaa
actgaaggagactcagagaaaaaaaagaagaagcaaaagaaagcaattgcagaagaagca
accaacggacattccaccccaaacaccccagtccagacgcccatccagacaccggcgcag
tcgagtgaagaatcagctagcgacagcgaaaaagaaccggaggagacaccagagcagaag
gaaggggccttctccaacttcaggatctcccaagtcaccatcaataaacttaaagctcgg
ggagtctcttacctgtttgacattcaggcgaagacatttaatcctgtatatgatggagag
gatgtaattgcccaagcccgaacaggaacagggaagactttctcatttgccatccccttg
gtggagaagcttcaaggaaatatgacagagtttgccagaggccggtctcccaaggtcctg
gtgttgactccaaccagagagttagccatccaggtcgctaaggactttaaagacgttagc
aagagagtctccattgcttgtttctatggaggcagctcatatatgccacagatcgaagct
atccgtaatggtatcgatgtattggttggcacccctggtcgcattaaagaccacctccag
aacaataaactcgacctctctaaagtgaagcacgtcgttctggatgaagtagaccagatg
ttggacatgggatttgcagagcaggttgaagagattctggcctcatcatatcataaagac
tccgactccaacccgcagactcttctgttttcggccacctgccccccctgggtctacgag
gttgccaagaaatacatgaggccaggttgcaaacatgttgacctgattggcaagaaaaca
cagaaagctgcaacaactgtggaacatctggccataacttgtcactggtcacagcgcaca
gctgtgctcgcagatgtgatccaggtttacagtggcagccacggcaaaaccatagtgttc
tgtgagacaaagaaagatgccaacgagctttccttgaattcatccctcaaacagagtgcc
cagtccctccatggtgatattccacagaaacagagagagacgacgctgaagggcttcagg
aatggggctttcgaggttctggttgccacgaacgttgcagcccgtgggttagacatccct
gaagttgatctagtgatccagtgttctccgcccaaggatgtggagtcatacatccaccgc
tcagggcgtactggtcgagctggcaggactggagtctgcatctgtttctaccagaggaaa
gaagaggaccagctgcgctatgtagaaaacaaagcgggcatcacattcagacgagttgga
gttcccaccgccaatgatatcatcaagtcatcaagcaaggatgctgtcaggtttctggac
tctgttccagctacagctatcgactacttcagagtgtcagcagagaagctgattgcggag
agaggagcagttgacgcattagctgccgccctggcccatatatctggagccacaagtcta
gagcagaggtcacttctcaactctgatgctggttacacaactgtgcagttggtatgttcc
caggagtgtcacaatctgggttacgtctggagaaccatcaaagaacagcttggagagcag
tttgagaaccacattcatagaatgaccttccttaaaggcaaaatgggagtttgttttgat
gtcccagttgacaaagtcaaggagatgcaggacaactggaaggatggtcgccgttggcag
ctgactctagccacagagctcccagagctggaggagaagcagttcaataaccgtggtgac
cgaggctttggtggcggtaacagaggaggagggtttagaggtggaagggggcggagtttt
ggtggcttccgtaacagtggtggcggtggcggtggcagaggcggctatggcaacaacaga
ggagggcacaaacgcaacttcagccaagcttttgattattga
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