Acanthopagrus latus (yellowfin seabream): 119018016
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Entry
119018016 CDS
T08233
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119018016 (irx5a)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119018016 (irx5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
119018016
NCBI-ProteinID:
XP_036951235
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Position
4:complement(30452689..30456836)
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AA seq
458 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAYR
KNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKM
TWTPRNRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTEADHKLLNPGDIGCDRFKEEN
HGKDTDPLLSDSELKDQEERTTELLLPDSAKPTTSSPSAVPRGNQPVAQQDKPSDLSHAP
GTVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKGSGDAPQACPGLGQSAVMGTNASP
SRSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQT
VLNRAEALVRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccgtccgcttccttagccctgtactcctgc
cctgcgtacagcaccagcgtcatatcgggacccagaaccgaggaacttgggagatcctct
tcgggatccgcttttgcgccctatgccggatctactgcgttcaccagcgcctcgccaggc
tacaactcccacttaccgtacagtgcagacgcggcggcagctgccacattcacctcgtac
gtggtgagtaaactaaagagctctccgtacgaccacaccacgggcatggccggctcaata
ggataccacccttacgcagcacccttgggcacctacccttacggtgacccggcgtaccgt
aaaaacgcaacccgggacgccaccgccaccctgaaggcctggctcaacgagcaccgcaag
aacccctacccgaccaaaggcgagaagatcatgctggccatcatcaccaagatgaccctc
acccaggtgtccacctggttcgccaacgcccggaggaggctaaagaaggagaacaagatg
acctggaccccccggaaccggagcgaggacgaggaggaggacgagaacatcgacctggag
aaaaacgacgacgacgagccgagcaagcccacggacaagggagactccacagacacagaa
gcagatcataaactgctgaacccaggggacataggctgtgacagatttaaagaggaaaac
cacggcaaagacacggatccccttctgagcgactcggagttaaaagaccaggaggagcgg
actacggagctgctgctgccggattccgcgaaacccaccacttcgtctccctcggcggtg
ccccgggggaaccagcccgttgcgcagcaagacaagccgtcagatttgagccatgcgccg
ggaacggtgaccagcaacgtgacctctgttatccactcgcccccctcggcccccaaaccc
aaactctggtcccttgcggagatcgccacgtcctcagacaggtgtaagggcagcggcgac
gcgccacaggcttgccccggtctgggccagagcgcggtcatgggcaccaacgcgtctcca
tcacggtcctcccctcagtgcccgctccccaacagcacggtcctatccaggcctctgtac
tacacctcccctttctaccccggctacacgaactatggtggcagttttggacaccttcac
agtaaccacggctcggtgaccacgggctccacggcacatttcaatggattaaaccagact
gtgttaaatagagcagaggctttggtcagggagagccagaaagtcagaggccaaacgcag
gtagatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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